Itaya virus, a novel orthobunyavirus associated with human febrile illness, Peru

Emerging Infectious Diseases

Volumn 21, Issue 5, 2015, Pages 781-788

  Hontz, Robert D ^a   Guevara, Carolina ^a   Halsey, Eric S ^a   Silvas, Jesus ^b,c   Santiago, Felix W ^b,c   Widen, Steven G ^b   Wood, Thomas G ^b   Casanova, Wilma ^d   Vasilakis, Nikos ^b,c,e   Watts, Douglas M ^a   Kochel, Tadeusz J ^a   Ebihara, Hideki ^f   Aguilar, Patricia V ^b,c,e  

^a Virology Program   (Peru)

^b UNIVERSITY OF TEXAS MEDICAL BRANCH   (United States)

^c Institute for Human Infections and Immunity   (United States)

^d Lab Regional de Salud de Loreto   (Peru)

^e Center for Biodefense and Emerging Infectious Diseases   (United States)

^f NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN M; VIRUS RNA;

ADULT; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; BUNYAVIRIDAE; CASE REPORT; DISEASES; ENZYME LINKED IMMUNOSORBENT ASSAY; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC REASSORTMENT; GENETIC VARIABILITY; HUMAN; IMMUNOFLUORESCENCE; ITAYAVIRUS; MALE; MIDDLE AGED; MOUSE; NEXT GENERATION SEQUENCING; NONHUMAN; ORTHOBUNYAVIRUS; ORTHOBUNYAVIRUS INFECTION; PERU; PHYLOGENY; SEROLOGY; VIRAL GENETICS; VIRUS IDENTIFICATION; VIRUS ISOLATION; VIRUS STRAIN; ANIMAL; BUNYAVIRIDAE INFECTIONS; CELL LINE; CLASSIFICATION; FEVER; GENETICS; GEOGRAPHY; HEALTH SURVEY; ISOLATION AND PURIFICATION; SERODIAGNOSIS; SEROTYPING; VIROLOGY;

ADULT; ANIMALS; BUNYAVIRIDAE INFECTIONS; CELL LINE; FEVER; GEOGRAPHY; HUMANS; MALE; NEUTRALIZATION TESTS; ORTHOBUNYAVIRUS; PERU; PHYLOGENY; POPULATION SURVEILLANCE; REASSORTANT VIRUSES; RNA, VIRAL; SEROTYPING;

EID: 84928013630     PISSN: 10806040     EISSN: 10806059     Source Type: Journal    
DOI: 10.3201/eid2105.141368     Document Type: Article

References (40)

1. Mohamed M, McLees A, Elliott RM. Viruses in the Anopheles A, Anopheles B, and Tete serogroups in the Orthobunyavirus genus (family Bunyaviridae) do not encode an NSs protein. J Virol. 2009;83:7612–8. http://dx.doi.org/10.1128/JVI.02080-08
2. Yu XJ, Liang MF, Zhang SY, Liu Y, Li JD, Sun YL, et al. Fever with thrombocytopenia associated with a novel bunyavirus in China. N Engl J Med. 2011;364:1523–32.
3. Yanase T, Kato T, Aizawa M, Shuto Y, Shirafuji H, Yamakawa M, Tsuda T. Genetic reassortment between Sathuperi and Shamonda viruses of the genus Orthobunyavirus in nature: implications for their genetic relationship to Schmallenberg virus. Arch Virol. 2012;157:1611–6. http://dx.doi.org/10.1007/s00705-012-1341-8
4. Gerrard SR, Li L, Barrett AD, Nichol ST. Ngari virus is a Bunyamwera virus reassortant that can be associated with large outbreaks of hemorrhagic fever in Africa. J Virol. 2004;78:8922–6. http://dx.doi.org/10.1128/JVI.78.16.8922-8926.2004
5. Briese T, Calisher CH, Higgs S. Viruses of the family Bunyaviridae: are all available isolates reassortants? Virology. 2013;446:207–16. http://dx.doi.org/10.1016/j.virol.2013.07.030
6. Grimstad PR. California group virus disease. In: Monath TP, editor. The arboviruses: epidemiology and ecology. Boca Raton (FL): CRC Press; 1988. p. 99–136.
7. Gonzales JP, Georges AJ. Bunyaviral fevers: Bunyamwera, Ilesha, Germiston, Bwamba and Tataguine. In: Monath TP, editor. The arboviruses: epidemiology and ecology. Boca Raton (FL): CRC Press; 1988. p. 87–98.
8. Aguilar PV, Barrett AD, Saeed MF, Watts DM, Russell K, Guevara C, et al. Iquitos virus: a novel reassortant Orthobunyavirus associated with human illness in Peru. PLoS Negl Trop Dis. 2011;5:e1315. http://dx.doi.org/10.1371/journal.pntd.0001315
9. Forshey BM, Guevara C, Laguna-Torres VA, Cespedes M, Vargas J, Gianella A, et al. Arboviral etiologies of acute febrile illnesses in Western South America, 2000–2007. PLoS Negl Trop Dis. 2010;4:e787. http://dx.doi.org/10.1371/journal.pntd.0000787
10. Calisher CH. Medically important arboviruses of the United States and Canada. Clin Microbiol Rev. 1994;7:89–116.
11. Hang J, Forshey BM, Yang Y, Solórzano VF, Kuschner RA, Halsey ES, et al. Genomic characterization of group C Orthobunyavirus reference strains and recent South American clinical isolates. PLoS ONE. 2014;9:e92114. http://dx.doi.org/10.1371/journal.pone.0092114
12. Aguilar PV, Morrison AC, Rocha C, Watts DM, Beingolea L, Suarez V, et al. Guaroa virus infection among humans in Bolivia and Peru. Am J Trop Med Hyg. 2010;83:714–21. http://dx.doi.org/10.4269/ajtmh.2010.10-0116
13. Forshey BM, Castillo RM, Hang J. Group C Orthobunyavirus genomic sequences require validation. J Virol. 2014;88:3052–3. http://dx.doi.org/10.1128/JVI.03295-13
14. de Brito Magalhães CL, Quinan BR, Novaes RF, dos Santos JR, Kroon EG, Bonjardim CA, et al. Caraparu virus (group C Orthobunyavirus): sequencing and phylogenetic analysis based on the conserved region 3 of the RNA polymerase gene. Virus Genes. 2007;35:681–4. http://dx.doi.org/10.1007/s11262-007-0138-4
15. de Brito Magalhães CL, Drumond BP, Novaes RF, Quinan BR, de Magalhães JC, dos Santos JR, et al. Identification of a phylogenetically distinct orthobunyavirus from group C. Arch Virol. 2011;156:1173–84. http://dx.doi.org/10.1007/s00705-011-0976-1
16. Causey OR, Causey CE, Maroja OM, Macedo DG. The isolation of arthropod-borne viruses, including members of two hitherto undescribed serological groups, in the Amazon region of Brazil. Am J Trop Med Hyg. 1961;10:227–49.
17. Srihongse S, Galindo P, Grayson MA. Isolation of group C arboviruses in Panama including two new members, Patois and Zegla. Am J Trop Med Hyg. 1966;15:379–84.
18. Pinheiro F, Travassos da Rosa A. Part F. Group C bunyaviral fevers. In: GM B, editor. Handbook of zoonoses. Boca Raton (FL): CRC Press; 1994. p. 212–214.
19. Lohse M, Bolger AM, Nagel A, Fernie AR, Lunn JE, Stitt M, et al. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 2012;40:W622–27. http://dx.doi.org/10.1093/nar/gks540
20. Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ, Birol I. ABySS: a parallel assembler for short read sequence data. Genome Res. 2009;19:1117–23. http://dx.doi.org/10.1101/gr.089532.108
21. Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods. 2012;9:357–9. http://dx.doi.org/10.1038/nmeth.1923
22. Robinson JT, Thorvaldsdóttir H, Winckler W, Guttman M, Lander ES, Getz G, et al. Integrative genomics viewer. Nat Biotechnol. 2011;29:24–6. http://dx.doi.org/10.1038/nbt.1754
23. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731–9. http://dx.doi.org/10.1093/molbev/msr121
24. Travassos da Rosa AP, Tesh RB, Pinheiro FP, Travassos da Rosa JF, Peterson NE. Characterization of eight new phlebotomus fever serogroup arboviruses (Bunyaviridae: Phlebovirus) from the Amazon region of Brazil. Am J Trop Med Hyg. 1983;32:1164–71.
25. Beaty BJ, Calisher CH, Shope RE. Arboviruses. In: Schmidt NJ, Emmons, EW, editor. Diagnostic procedures for viral, rickettsial and chlamydial infections. 6th ed. Washington: American Public Health Association; 1989. p. 797–855.
26. Aguilar PV, Estrada-Franco JG, Navarro-Lopez R, Ferro C, Haddow AD, Weaver SC. Endemic Venezuelan equine encephalitis in the Americas: hidden under the dengue umbrella. Future Virol. 2011;6:721–40. http://dx.doi.org/10.2217/fvl.11.50
27. Epelboin L, Boullé C, Ouar-Epelboin S, Hanf M, Dussart P, Djossou F, et al. Discriminating malaria from dengue fever in endemic areas: clinical and biological criteria, prognostic score and utility of the C-reactive protein: a retrospective matched-pair study in French Guiana. PLoS Negl Trop Dis. 2013;7:e2420. http://dx.doi.org/10.1371/journal.pntd.0002420
28. Karabatsos N, editor. International catalogue of arboviruses including certain other viruses of vertebrates. 3rd ed. San Antonio (TX): The American Society of Tropical Medicine and Hygiene for the Subcommittee on Information Exchange of the American Committee on Arthropod-borne Viruses; 1985 [cited 2015 Feb 12]. http://www.worldcat.org/title/international-catalogue-of-arboviruses-including-certain-other-viruses-of-vertebrates/oclc/13341580
29. Calisher CH, Gutierrez E, Francy DB, Alava A, Muth DJ, Lazuick JS. Identification of hitherto unrecognized arboviruses from Ecuador: members of serogroups B, C, Bunyamwera, Patois, and Minatitlan. Am J Trop Med Hyg. 1983;32:877–85.
30. Hoffmann B, Scheuch M, Höper D, Jungblut R, Holsteg M, Schirrmeier H. Novel orthobunyavirus in Cattle, Europe, 2011. Emerg Infect Dis. 2012;18:469–72. http://dx.doi.org/10.3201/eid1803.111905
31. Radke EG, Gregory CJ, Kintziger KW, Sauber-Schatz EK, Hunsperger EA, Gallagher GR, et al. Dengue outbreak in Key West, Florida, USA, 2009. Emerg Infect Dis. 2012;18:135–7. http://dx.doi.org/10.3201/eid1801.110130
32. Fischer M, Staples JE; Arboviral Diseases Branch, National Center for Emerging and Zoonotic Infectious Diseases, CDC. Notes from the field: chikungunya virus spreads in the Americas–Caribbean and South America, 2013–2014. MMWR Morb Mortal Wkly Rep. 2014;63:500–1.
33. McMullan LK, Folk SM, Kelly AJ, MacNeil A, Goldsmith CS, Metcalfe MG, et al. A new phlebovirus associated with severe febrile illness in Missouri. N Engl J Med. 2012;367:834–41. http://dx.doi.org/10.1056/NEJMoa1203378
34. Morrison AC, Minnick SL, Rocha C, Forshey BM, Stoddard ST, Getis A, et al. Epidemiology of dengue virus in Iquitos, Peru 1999 to 2005: interepidemic and epidemic patterns of transmission. PLoS Negl Trop Dis. 2010;4:e670. http://dx.doi.org/10.1371/journal.pntd.0000670
35. Manock SR, Jacobsen KH, de Bravo NB, Russell KL, Negrete M, Olson JG, et al. Etiology of acute undifferentiated febrile illness in the Amazon basin of Ecuador. Am J Trop Med Hyg. 2009;81:146–51.
36. Venegas EA, Aguilar PV, Cruz C, Guevara C, Kochel TJ, Vargas J, et al. Ilheus virus infection in human, Bolivia. Emerg Infect Dis. 2012;18:516–8. http://dx.doi.org/10.3201/eid1803.111486
37. Morrison AC, Forshey BM, Notyce D, Astete H, Lopez V, Rocha C, et al. Venezuelan equine encephalitis virus in iquitos, peru: urban transmission of a sylvatic strain. PLoS Negl Trop Dis. 2008;2:e349. http://dx.doi.org/10.1371/journal.pntd.0000349
38. Vasconcelos P, Travassos da Rosa A, Pinheiro F, Shope R, Travassos da Rosa J, Rodrigues SG, et al. Arboviruses pathogenic for man in Brazil. In: Travassos da Rosa A, Travassos da Rosa J, Vasconcelos P, editors. An overview of arbovirology in Brazil and neighboring countries. Belem (Brazil): Instituto Evandro Chagas; 1998. p. 72–99.
39. Nunes MR, Travassos da Rosa AP, Weaver SC, Tesh RB, Vasconcelos PF. Molecular epidemiology of group C viruses (Bunyaviridae, Orthobunyavirus) isolated in the Americas. J Virol. 2005;79:10561–70. http://dx.doi.org/10.1128/JVI.79.16.10561-10570.2005
40. Nunes MR, Travassos da Rosa AP, Weaver SC, Tesh RB, Vasconcelos PF. Reply to “Group C orthobunyavirus genomic sequences require validation.” J Virol. 2014;88:3054. http://dx.doi.org/10.1128/JVI.03439-13