메뉴 건너뛰기




Volumn 31, Issue 8, 2015, Pages 1313-1315

PEASE: Predicting B-cell epitopes utilizing antibody sequence

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBODY; ANTIGEN; COMPLEMENTARITY DETERMINING REGION; EPITOPE;

EID: 84927722994     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btu790     Document Type: Article
Times cited : (48)

References (13)
  • 1
    • 84925884151 scopus 로고    scopus 로고
    • T-cell epitope prediction methods: An overview
    • Desai, D. V. and Kulkarni-Kale, U. (2014) T-cell epitope prediction methods: an overview. Methods Mol. Biol., 1184, 333-364.
    • (2014) Methods Mol. Biol. , vol.1184 , pp. 333-364
    • Desai, D.V.1    Kulkarni-Kale, U.2
  • 2
    • 34248581488 scopus 로고    scopus 로고
    • Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools
    • Greenbaum, J. A. et al. (2007) Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools. J. Mol. Recognit., 20, 75-82.
    • (2007) J. Mol. Recognit. , vol.20 , pp. 75-82
    • Greenbaum, J.A.1
  • 3
    • 84906235282 scopus 로고    scopus 로고
    • Improving B-cell epitope prediction and its application to global antibody-antigen docking
    • Krawczyk, K. et al. (2014) Improving B-cell epitope prediction and its application to global antibody-antigen docking. Bioinformatics, 30, 2288-2294.
    • (2014) Bioinformatics , vol.30 , pp. 2288-2294
    • Krawczyk, K.1
  • 4
    • 84872049601 scopus 로고    scopus 로고
    • Reliable B cell epitope predictions: Impacts of method development and improved benchmarking
    • Kringelum, J. V. et al. (2012) Reliable B cell epitope predictions: impacts of method development and improved benchmarking. PLoS Comput. Biol., 8, e1002829.
    • (2012) PLoS Comput. Biol. , vol.8 , pp. e1002829
    • Kringelum, J.V.1
  • 5
    • 83155164579 scopus 로고    scopus 로고
    • Predictions versus high-throughput experiments in T-cell epitope discovery: Competition or synergy?
    • Lundegaard, C. et al. (2012) Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy? Expert Rev. Vaccines, 11, 43-54.
    • (2012) Expert Rev. Vaccines , vol.11 , pp. 43-54
    • Lundegaard, C.1
  • 6
    • 84885405356 scopus 로고    scopus 로고
    • The structural basis of antibody-antigen recognition
    • Sela-Culang, I. et al. (2013) The structural basis of antibody-antigen recognition. Front Immunol., 4, 302.
    • (2013) Front Immunol. , vol.4 , pp. 302
    • Sela-Culang, I.1
  • 7
    • 84898492241 scopus 로고    scopus 로고
    • Using a combined computational-experimental approach to predict antibody-specific B cell epitopes
    • Sela-Culang, I. et al. (2014) Using a combined computational-experimental approach to predict antibody-specific B cell epitopes. Structure, 22, 646-657.
    • (2014) Structure , vol.22 , pp. 646-657
    • Sela-Culang, I.1
  • 8
    • 77955213210 scopus 로고    scopus 로고
    • Use of amino acid composition to predict epitope residues of individual antibodies
    • Soga, S. et al. (2010) Use of amino acid composition to predict epitope residues of individual antibodies. Protein Eng. Des. Sel., 23, 441-448.
    • (2010) Protein Eng. Des. Sel. , vol.23 , pp. 441-448
    • Soga, S.1
  • 9
    • 77954521521 scopus 로고    scopus 로고
    • Evaluation of spatial epitope computational tools based on experimentally-confirmed dataset for protein antigens
    • Xu, X. et al. (2010) Evaluation of spatial epitope computational tools based on experimentally-confirmed dataset for protein antigens. Chin. Sci. Bull., 55, 2169-2174.
    • (2010) Chin. Sci. Bull. , vol.55 , pp. 2169-2174
    • Xu, X.1
  • 10
    • 64049090391 scopus 로고    scopus 로고
    • An introduction to epitope prediction methods and software
    • Yang, X. D. and Yu, X. L. (2009) An introduction to epitope prediction methods and software. Rev. Med. Virol., 19, 77-96.
    • (2009) Rev. Med. Virol. , vol.19 , pp. 77-96
    • Yang, X.D.1    Yu, X.L.2
  • 11
    • 84876426871 scopus 로고    scopus 로고
    • Conformational B-cell epitope prediction on antigen protein structures: A review of current algorithms and comparison with common binding site prediction methods
    • Yao, B. et al. (2013) Conformational B-cell epitope prediction on antigen protein structures: a review of current algorithms and comparison with common binding site prediction methods. PLoS One, 8, e62249.
    • (2013) PLoS One , vol.8 , pp. e62249
    • Yao, B.1
  • 12
    • 77952633690 scopus 로고    scopus 로고
    • Mining for the antibody-antigen interacting associations that predict the B cell epitopes
    • Zhao, L. and Li, J. Y. (2010) Mining for the antibody-antigen interacting associations that predict the B cell epitopes. BMC Struct. Biol., 10, 56.
    • (2010) BMC Struct. Biol. , vol.10 , pp. 56
    • Zhao, L.1    Li, J.Y.2
  • 13
    • 80052890732 scopus 로고    scopus 로고
    • Antibody-specified B-cell epitope prediction in line with the principle of context-awareness
    • Zhao, L. et al. (2011) Antibody-specified B-cell epitope prediction in line with the principle of context-awareness. IEEE-ACM Trans. Comput. Biol. Bioinform., 8, 1483-1494.
    • (2011) IEEE-ACM Trans. Comput. Biol. Bioinform. , vol.8 , pp. 1483-1494
    • Zhao, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.