Community-wide spatial and temporal discordances of seed-seedling shadows in a tropical rainforest

PLoS ONE

Volumn 10, Issue 4, 2015, Pages

  Rother, Débora Cristina ^a,b   Pizo, Marco Aurélio ^a   Siqueira, Tadeu ^a   Rodrigues, Ricardo Ribeiro ^b   Jordano, Pedro ^c  

^a SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

^c DEPARTMENT OF CONSERVATION BIOLOGY   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ABIOTIC STRESS; ARTICLE; BAMBOO; BIOTIC STRESS; BRAZIL; CONTROLLED STUDY; DENSITY; ENVIRONMENTAL FACTOR; FRUITING; LANDSCAPE; MICROHABITAT; NONHUMAN; PLANT COMMUNITY; PLANT LIFE CYCLE STAGE; PLANT SEED; SEED DISPERSAL; SEEDLING; SPECIES RICHNESS; STATISTICAL MODEL; TROPICAL RAIN FOREST; ECOSYSTEM; FRUIT; GROWTH, DEVELOPMENT AND AGING; RAIN FOREST; SOIL; TROPIC CLIMATE;

BAMBUSA;

SOIL;

BRAZIL; ECOSYSTEM; FRUIT; RAINFOREST; SEEDLINGS; SEEDS; SOIL; TROPICAL CLIMATE;

EID: 84927537682     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0123346     Document Type: Article

References (55)

1. Schupp EW, Fuentes M (1995) Spatial patterns of seed dispersal and the unification of plant population ecology. Écoscience 2: 267-275
2. Clark JS, Beckage B, Camill P, Cleveland B, HilleRisLambers J, Lichter J, et al. (1999) Interpreting recruitment limitation in forests. Am J Bot 86: 1-16 PMID: 21680341
3. Schurr FM, Steinitz O, Nathan R (2008) Plant fecundity and seed dispersal in spatially heterogeneous environments: models, mechanisms and estimation. J Ecol 96: 628-641
4. Ouborg NJ, Piquet Y, van Groenendael JM (1999) Population genetics, molecular markers and the study of dispersal in plants. J Ecol 87: 551-568
5. Wenny DG, Levey DJ (1998) Directed seed dispersal by bellbirds in a tropical cloud forest. P Natl Acad Sci USA 95: 6204-6207 PMID: 9600942
6. Jordano P, Schupp EW (2000) Seed disperser effectiveness: the quantity component and patterns of seed rain for Prunus mahaleb. Ecol Monogr 70:591-615
7. Wenny DG (2001) Advantages of seed dispersal: A re-evaluation of directed dispersal. Evol Ecol Res 3: 51-74
8. Schupp EW, Howe HF, Augspurger CK, Levey DJ (1989) Arrival and survival in tropical treefall gaps. Ecology 70: 562-564
9. Rey P, Alcântara JM (2000) Recruitment dynamics of a fleshy-fruited plant (Olea europaea): connecting patterns of seed dispersal to seedling establishment. J Ecol 88: 622-633
10. Jordano P, Herrera CM (1995) Shuffling the offspring: Uncoupling and spatial discordance of multiple stages in vertebrate seed dispersal. Écoscience 2: 230-237
11. Schupp EW (1995) Seed-seedling conflicts, habitat choice, and patterns of plant recruitment. Am J Bot 82: 399-409
12. Garcia D, Obeso JR, Martinez I (2005) Spatial concordance between seed rain and seedling establishment in bird-dispersed trees: does scale matter? J. Ecol 93: 693-704
13. Hampe A, García-Castaño JL, Schupp EW, Jordano P (2008) Spatio-temporal dynamics and local hotspots of initial recruitment in vertebrate-dispersed trees. J Ecol 96: 668-678
14. Balcomb SR, Chapman CA (2003) Bridging the gap: influence of seed deposition on seedling recruitment in a primate-tree interaction. Ecol Monogr 73: 625-642.
15. Rother DC, Jordano P, Rodrigues RR, Pizo MA (2013a) Demographic bottlenecks in tropical plant regeneration: A comparative analysis of causal influences. Perspect Plant Ecol 15: 86-96
16. Rodrigues RR (Coord.) (2005) Parcelas Permanentes em 40 ha de florestas do Estado de São Paulo: uma experiência interdisciplinar. In: 4° Relatório do projeto "Diversidade, dinâmica e conservação em florestas do estado de São Paulo: 40,96 ha de parcelas permanentes" (Processo no 1999/09635-0). ESALQ/USP, Piracicaba, São Paulo, Brazil. Available: http://www.lerf.esalq.usp.br/parrel2005.php. Accessed 10 September 2010.
17. Rother DC, Rodrigues RR, Pizo MA (2009) Effects of bamboo stands on seed rain and seed limitation in a rainforest. Forest Ecol Manag 257: 885-892
18. Londoño X, Clark LG (2002) Three new taxa of Guadua (Poaceae: Bambusoideae) from South America. Novon 12: 64-76
19. Londoño X (2001) Guadua Kunth. In: Wanderley MGL, Shepherd GJ, Giulietti AM, editors. Flora fanerogâmica do Estado de São Paulo: Poaceae. Hucitec, São Paulo, pp 38-39.
20. Lima RAF, Rother DC, Muler AM, Lepsch IF, Rodrigues RR (2012) Bamboo overabundance alters forest structure and dynamics in the Atlantic Forest hotspot. Biol Conserv 147 (1): 32-39
21. Alves GTR (2007) Aspectos da história de vida de Guadua tagoara (Nees) Kunth (Poaceae: Bambuseae) na Serra dos Órgãos, RJ. PhD thesis, Universidade Federal de São Carlos
22. Rizzini CT (1997) Tratado de fitogeografia do Brasil: Aspectos ecológicos, sociológicos e florísticos. 2a ed. Rio de Janeiro, émbito Cultural. 747 p.
23. Custódio-Filho A (2002) A Floresta Ombrófila Densa em diferentes altitudes no Parque Estadual Carlos Botelho, São Paulo, Brasil. Ph.D. Thesis, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brazil. Available: http://www.prpg.usp.br/usprio/?q=trabalhos/floresta-ombr%C3%B3filadensa-em-diferentes-altitudes-no-parque-estadual-carlos-botelho-s%C3%A3o-pau. Accessed 03 July 2014.
24. Muler AE, Rother DC, Brancalion PH, Naves RP, Rodrigues RR, Pizo MA (2014) Can overharvesting of a non-timber-forest-product change the regeneration dynamics of a tropical rainforest? The case study of Euterpe edulis. Forest Ecol Manag 324: 117-125
25. Raven PH, Evert RF, Eichhorn SE (2005) Biology of Plants, 7th ed. WH Freeman and Company Publishers, New York. 944 p
26. EMBRAPA (1997) Manual de métodos de análise de solos. 2nd ed. Rio de Janeiro: Centro Nacional de Pesquisa de Solos. 212 p PMID: 8791756
27. Gotelli NJ, Colwell RK (2001) Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness. Ecol Lett 4: 379-391
28. Gotelli NJ, Colwell RK (2011) Estimating species richness. In: Magurran AE, McGill BJ, editors. Frontiers in Measuring Biodiversity. New York: Oxford University Press, pp 39-54.
29. R Development Core Team (2014) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available: http://www.R-project.org/. Accessed 30 October 2014. doi: 10.1016/j.jneumeth.2014.06.019 PMID: 24970579
30. Perry JN, Winder L, Holland JM, Alston RD (1999) Red-blue plots for detecting clusters in count data. Ecol Lett 2: 106-113
31. Winder L, Alexander C, Holland JM, Woolley C, Perry JN (2001) Modelling the dynamic spatio-temporal response of predators to transient prey stands in the field. Ecol Lett 4: 568-576
32. Conrad K (2001) SadieShell. version 1.22. Available: http://home.cogeco.ca/~sadiespatial/index.html. Accessed 30 May 2013.
33. Resende M, Curi N, Rezende SB, Corrêa GF (2002) Pedologia: base para distinção de ambientes, 4th ed. Viçosa: Universidade Federal de Viçosa. 338 p.
34. Zuur A, Ieno EN, Walker N, Saveliev AA, Smith GM (2009) Mixed effects models and extensions in ecology with R. Springer, New York, NY, USA.
35. Bjørnstad ON (2013) ncf: spatial nonparametric covariance functions. R package version 1.1-5
36. Bates D, Maechler M, Bolker B, Walker S (2013) lme4: Linear mixed-effects models using Eigen and S4. R package version 1.0-4
37. Hothorn T, Bretz F, Westfall P (2008) Simultaneous inference in general parametric models. Biometrical Journal 50 (3): 346-363 doi: 10.1002/bimj.200810425 PMID: 18481363
38. Harrison XA (2014) Using observation-level random effects to model overdispersion in count data in ecology and evolution. PeerJ 2: e616 http://dx.doi.org/10.7717/peerj.616 doi: 10.7717/peerj.616 PMID: 25320683
39. Nathan R, Muller-Landau HC (2000) Spatial patterns of seed dispersal, their determinants and consequences for recruitment. Trends Ecol Evol 15: 278-285 PMID: 10856948
40. Galetti M, Aleixo A (1998) Effects of palm heart harvesting on avian frugivores in the Atlantic rain forest of Brazil. J Appl Ecol 35: 286-293.
41. Reis MS, Fantini AC, Nodari RO, Reis A, Gerrra MP, Mantovani A (2000) Management and conservation of natural populations in Atlantic rain forest: the case study of palm heart (Euterpe edulis Martius). Biotropica 32: 894-902
42. Fantini AC, Guries RP (2007) Forest structure and productivity of palmiteiro (Euterpe edulis Martius) in the Brazilian Mata Atlântica. Forest Ecol Manag 242: 185-194
43. Jordano P, Pulido F, Arroyo J, García-Castaño JL, García-Fayos P (2004) Procesos de limitación demográfica. En: Valladares F, editor. Ecología del bosque mediterráneo en un mundo cambiante. Ministerio de Medio Ambiente, EGRAF, S. A., Madrid, pp 229-248. doi: 10.1016/j.watres.2013.08.031 PMID: 24645459
44. Clark DB, Clark DA, Read JM (1998) Edaphic variation and the mesoscale distribution of tree species in a neotropical rain forest. J Ecol 86: 101-112
45. Oliveira-Filho AT, Curi N, Vilela EA, Carvalho DA (2001) Variation in tree community composition and structure with changes in soil properties within a fragmento of semideciduous forest in South-eastern Brazil. Edinburgh J Bot 58: 139-158
46. Carvalho DA, Oliveira-Filho AT, van den Berg E, Fontes MAL, Vilela EA, Marques JJGSM, et al. (2005). Variações florísticas e estruturais do componente arbóreo de uma floresta ombrófila altomontana às margens do rio Grande, Bocaina de Minas, MG, Brasil. Acta Bot Bras 19: 91-109
47. John R, Dalling JW, Harms KE, Yavitt JB, Stallard RF, Mirabello M, et al. (2007) Soil nutrients influence spatial distributions of tropical tree species. P Natl Acad Sci Usa 104 (3): 864-869 PMID: 17215353
48. Schupp EW, Milleron T, Russo SE (2002) Dissemination limitation and the origin and maintenance of species-rich tropical forests. In: Levey D, Silva W, Galetti M, editors. Seed dispersal and frugivory: ecology, evolution, and conservation. CAB International, Wallingford, UK, pp 19-34.
49. Silveira M (2005) A floresta aberta com bambu no sudoeste da Amazônia: padrões e processos em múltiplas escalas, Rio Branco: EDIUFAC. 152 p.
50. Baldeck CA, Harms KE, Yavitt JB, John R, Turner BL, Valencia R, et al. (2013) Habitat filtering across tree life stages in tropical forest communities. Proc Biol Sci 280 (1766): 20130548 doi: 10.1098/rspb.2013.0548 PMID: 23843384
51. Wang BC, Smith TB (2002) Closing the seed dispersal loop. Trends Ecol Evol 17: 379-85
52. Botrel RT, Oliveira-Filho AT, Rodrigues LA, Curi, N (2002) Influência do solo e topografia sobre as variações da composição florística e estrutura da comunidade arbóreo-arbustiva de uma floresta estacional semidecidual em Ingaí, MG. Braz J Bot 25: 195-213
53. Rother DC, Alves KJF, Pizo MA (2013b) Avian assemblages in bamboo and non-bamboo patches in a tropical rainforest. Emu - Austral Ornithology 113: 52-61
54. Manhães AP, Morokawa MJ, Silva Matos DM, Terra G (2007) Produção e alocação de biomassa de coortes de Guadua tagoara (Ness) Kunth (Poaceae: Bambusoideae) em floresta ombrófila densa Montana, Teresópolis, RJ. In: Anais do VIII Congresso de Ecologia do Brasil, Caxambu, Minas Gerais, Brazil doi: 10.1016/S0176-1617(85)80065-1 PMID: 19803457
55. Montti L, Villagra M, Campanello PI, Gatti MG, Guillermo G (2013) Functional traits enhance invasiveness of bamboos over co-occurring tree saplings in the semideciduous Atlantic Forest. Acta Oecol 54: 36-44