-
1
-
-
0001578518
-
A learning algorithm for Boltzmann machines
-
Ackley, D., Hinton, G., Sejnowski, T.: A learning algorithm for Boltzmann machines. Cognitive Science, 147–169 (1985)
-
(1985)
Cognitive Science
, pp. 147-169
-
-
Ackley, D.1
Hinton, G.2
Sejnowski, T.3
-
2
-
-
84897459814
-
An atlas of active enhancers across human cell types and tissues
-
Andersson, R., Gebhard, C., Miguel-Escalada, I., et al.: An atlas of active enhancers across human cell types and tissues. Nature 507, 455–461 (2014)
-
(2014)
Nature
, vol.507
, pp. 455-461
-
-
Andersson, R.1
Gebhard, C.2
Miguel-Escalada, I.3
-
3
-
-
84879854889
-
Representation learning: A review and new perspectives
-
Bengio, Y., Courville, A., Vincent, P.: Representation learning: A review and new perspectives. IEEE Transactions on Pattern Analysis and Machine Intelligence 35(8), 1798–1828 (2013)
-
(2013)
IEEE Transactions on Pattern Analysis and Machine Intelligence
, vol.35
, Issue.8
, pp. 1798-1828
-
-
Bengio, Y.1
Courville, A.2
Vincent, P.3
-
4
-
-
84857819132
-
Theano: A CPU and GPU math expression compiler
-
SciPy), June
-
Bergstra, J., Breuleux, O., Bastien, F., Lamblin, P., Pascanu, R., Desjardins, G., Turian, J., Warde-Farley, D., Bengio, Y.: Theano: a CPU and GPU math expression compiler. In: The Python for Scientific Computing Conference (SciPy), June 2010
-
(2010)
The Python for Scientific Computing Conference
-
-
Bergstra, J.1
Breuleux, O.2
Bastien, F.3
Lamblin, P.4
Pascanu, R.5
Desjardins, G.6
Turian, J.7
Warde-Farley, D.8
Bengio, Y.9
-
5
-
-
0002709342
-
Feature selection via concave minimization and support vector machines
-
Morgan Kaufmann Publishers Inc
-
Bradley, P., Mangasarian, O.: Feature selection via concave minimization and support vector machines. In: International Conference onMachine Learning, pp. 82–90. Morgan Kaufmann Publishers Inc. (1998)
-
(1998)
International Conference Onmachine Learning
, pp. 82-90
-
-
Bradley, P.1
Mangasarian, O.2
-
6
-
-
0030965242
-
Transcriptional activity and constitutive nuclear localization of the ETS protein Elf-1
-
Bredemeier-Ernst, I., Nordheim, A., Janknecht, R.: Transcriptional activity and constitutive nuclear localization of the ETS protein Elf-1. FEBS Letters 408(1), 47–51 (1997)
-
(1997)
FEBS Letters
, vol.408
, Issue.1
, pp. 47-51
-
-
Bredemeier-Ernst, I.1
Nordheim, A.2
Janknecht, R.3
-
8
-
-
77950537175
-
Regularization paths for generalized linear models via coordinate descent
-
Friedman, J., Hastie, T., Tibshirani, R.: Regularization paths for generalized linear models via coordinate descent. Journal of Statistical Software 33, 1–22 (2010)
-
(2010)
Journal of Statistical Software
, vol.33
, pp. 1-22
-
-
Friedman, J.1
Hastie, T.2
Tibshirani, R.3
-
9
-
-
33746600649
-
Reducing the dimensionality of data with neural networks
-
Hinton, G., Salakhutdinov, R.: Reducing the dimensionality of data with neural networks. Science 313, 504–507 (2006)
-
(2006)
Science
, vol.313
, pp. 504-507
-
-
Hinton, G.1
Salakhutdinov, R.2
-
10
-
-
33745805403
-
A fast learning algorithm for deep belief nets
-
Hinton, G., Osindero, S., Teh, Y.: A fast learning algorithm for deep belief nets. Neural Computation 18, 1527–1554 (2006)
-
(2006)
Neural Computation
, vol.18
, pp. 1527-1554
-
-
Hinton, G.1
Osindero, S.2
Teh, Y.3
-
11
-
-
79956081339
-
The transcription factor BATF controls the global regulators of class-switch recombination in both B cells and T cells
-
Ise, W., Kohyama, M., Schraml, B., Zhang, T., Schwer, B., Basu, U., Alt, F., Tang, J., Oltz, E., Murphy, T., Murphy, K.: The transcription factor BATF controls the global regulators of class-switch recombination in both B cells and T cells. Nature Immunology 12(6), 536–543 (2011)
-
(2011)
Nature Immunology
, vol.12
, Issue.6
, pp. 536-543
-
-
Ise, W.1
Kohyama, M.2
Schraml, B.3
Zhang, T.4
Schwer, B.5
Basu, U.6
Alt, F.7
Tang, J.8
Oltz, E.9
Murphy, T.10
Murphy, K.11
-
12
-
-
77951073899
-
Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns
-
Kratz, A., Arner, E., Saito, R., Kubosaki, A., Kawai, J., Suzuki, H., Carninci, P., Arakawa, T., Tomita, M., Hayashizaki, Y., Daub, C.: Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns. BMC Genomics 11, 257 (2010)
-
(2010)
BMC Genomics
, vol.11
, pp. 257
-
-
Kratz, A.1
Arner, E.2
Saito, R.3
Kubosaki, A.4
Kawai, J.5
Suzuki, H.6
Carninci, P.7
Arakawa, T.8
Tomita, M.9
Hayashizaki, Y.10
Daub, C.11
-
13
-
-
0032203257
-
Gradient-based learning applied to document recognition
-
LeCun, Y., Bottou, L., Bengio, Y., Haffner, P.: Gradient-based learning applied to document recognition. Proceedings of the IEEE 86(11), 2278–2324 (1998)
-
(1998)
Proceedings of the IEEE
, vol.86
, Issue.11
, pp. 2278-2324
-
-
Lecun, Y.1
Bottou, L.2
Bengio, Y.3
Haffner, P.4
-
14
-
-
84876435579
-
The BCL11A transcription factor directly activates rag gene expression and V(D)J recombination
-
Lee, B., Dekker, J., Lee, B., Iyer, V., Sleckman, B., Shaffer, A.I., Ippolito, G., Tucker, P.: The BCL11A transcription factor directly activates rag gene expression and V(D)J recombination. Molecular Cell Biology 33(9), 1768–1781 (2013)
-
(2013)
Molecular Cell Biology
, vol.33
, Issue.9
, pp. 1768-1781
-
-
Lee, B.1
Dekker, J.2
Lee, B.3
Iyer, V.4
Sleckman, B.5
Shaffer, A.I.6
Ippolito, G.7
Tucker, P.8
-
16
-
-
84881249254
-
Classification approach based on non-negative least squares
-
Li, Y., Ngom, A.: Classification approach based on non-negative least squares. Neurocomputing 118, 41–57 (2013)
-
(2013)
Neurocomputing
, vol.118
, pp. 41-57
-
-
Li, Y.1
Ngom, A.2
-
17
-
-
84926383227
-
-
LISA Lab: Deep learning tutorials
-
LISA Lab: Deep learning tutorials. http://deeplearning.net/tutorial
-
-
-
-
18
-
-
84880780575
-
Transcription factor EBF1 is essential for the maintenance of B cell identity and prevention of alternative fates in committed cells
-
Nechanitzky, R., Akbas, D., Scherer, S., Gyory, I., Hoyler, T., Ramamoorthy, S., Diefenbach, A., Grosschedl, R.: Transcription factor EBF1 is essential for the maintenance of B cell identity and prevention of alternative fates in committed cells. Nature Immunology 14(8), 867–875 (2013)
-
(2013)
Nature Immunology
, vol.14
, Issue.8
, pp. 867-875
-
-
Nechanitzky, R.1
Akbas, D.2
Scherer, S.3
Gyory, I.4
Hoyler, T.5
Ramamoorthy, S.6
Diefenbach, A.7
Grosschedl, R.8
-
19
-
-
79953680185
-
Nuclear factor I revealed as family of promoter binding transcription activators
-
Pjanic, M., Pjanic, P., Schmid, C., Ambrosini, G., Gaussin, A., Plasari, G., Mazza, C., Bucher, P., Mermod, N.: Nuclear factor I revealed as family of promoter binding transcription activators. BMC Genomics 12, 181 (2011)
-
(2011)
BMC Genomics
, vol.12
, pp. 181
-
-
Pjanic, M.1
Pjanic, P.2
Schmid, C.3
Ambrosini, G.4
Gaussin, A.5
Plasari, G.6
Mazza, C.7
Bucher, P.8
Mermod, N.9
-
20
-
-
0031114483
-
Genecards: Integrating information about genes, proteins and diseases
-
Rebhan, M., Chalifa-Caspi, V., Prilusky, J., Lancet, D.: Genecards: Integrating information about genes, proteins and diseases. Trends in Genetics 13(4), 163 (1997)
-
(1997)
Trends in Genetics
, vol.13
, Issue.4
, pp. 163
-
-
Rebhan, M.1
Chalifa-Caspi, V.2
Prilusky, J.3
Lancet, D.4
-
21
-
-
84899450857
-
Transcriptional enhancers: From properties to genome-wide predictions
-
Shlyueva, D., Stampfel, G., Stark, A.: Transcriptional enhancers: From properties to genome-wide predictions. Nature Review Genetics 15, 272–286 (2014)
-
(2014)
Nature Review Genetics
, vol.15
, pp. 272-286
-
-
Shlyueva, D.1
Stampfel, G.2
Stark, A.3
-
22
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
The ENCODE Project Consortium
-
The ENCODE Project Consortium: An integrated encyclopedia of DNA elements in the human genome. Nature 489, 57–74 (2012)
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
23
-
-
84897406127
-
The RIKEN PMI, CLST (DGT): A promoter-level mammalian expression atlas
-
The FANTOM Consortium
-
The FANTOM Consortium: The RIKEN PMI, CLST (DGT): A promoter-level mammalian expression atlas. Nature 507, 462–470 (2014)
-
(2014)
Nature
, vol.507
, pp. 462-470
-
-
-
25
-
-
33845451555
-
Profile of histone lysine methylation across transcribed mammalian chromatin
-
Vakoc, C., Sachdeva, M., Wang, H., Blobel, G.: Profile of histone lysine methylation across transcribed mammalian chromatin. Molecular and Cellular Biology 26(24), 9185–9195 (2006)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.24
, pp. 9185-9195
-
-
Vakoc, C.1
Sachdeva, M.2
Wang, H.3
Blobel, G.4
-
26
-
-
84898021970
-
H3K4me2 reliably defines transcription factor binding regions in different cells
-
Wang, Y., Li, X., Hua, H.: H3K4me2 reliably defines transcription factor binding regions in different cells. Genomics 103(2–3), 222–228 (2014)
-
(2014)
Genomics
, vol.103
, Issue.2-3
, pp. 222-228
-
-
Wang, Y.1
Li, X.2
Hua, H.3
-
27
-
-
78650304236
-
Charting histone modifications and the functional organization of mammalian genomes
-
Zhou, V., Goren, A., Bernstein, B.: Charting histone modifications and the functional organization of mammalian genomes. Nature Review Genetics 12, 7–18 (2011)
-
(2011)
Nature Review Genetics
, vol.12
, pp. 7-18
-
-
Zhou, V.1
Goren, A.2
Bernstein, B.3
-
28
-
-
16244401458
-
Regularization and variable selection via the elastic net
-
Zou, H., Hastie, T.: Regularization and variable selection via the elastic net. J. R. Stat. Soc. Series B Stat. Methodol. 67(2), 301–320 (2005)
-
(2005)
J. R. Stat. Soc. Series B Stat. Methodol
, vol.67
, Issue.2
, pp. 301-320
-
-
Zou, H.1
Hastie, T.2
|