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Volumn 10, Issue 3, 2015, Pages

Genome-wide survey and expression analysis of Chlamydomonas reinhardtii U-box E3 ubiquitin ligases (CrPUBs) reveal a functional lipid metabolism module

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; U BOX E3 UBIQUITIN LIGASE; UBIQUITIN PROTEIN LIGASE; UNCLASSIFIED DRUG; PLANT PROTEIN;

EID: 84926288192     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0122600     Document Type: Article
Times cited : (28)

References (71)
  • 1
    • 3242665372 scopus 로고    scopus 로고
    • The ubiquitin 26S proteasome proteolytic pathway
    • PMID: 15377232
    • Smalle J, Vierstra RD. The ubiquitin 26S proteasome proteolytic pathway. Annu Rev Plant Biol. 2004; 55: 555-590. PMID: 15377232
    • (2004) Annu Rev Plant Biol , vol.55 , pp. 555-590
    • Smalle, J.1    Vierstra, R.D.2
  • 2
    • 79959952615 scopus 로고    scopus 로고
    • Regulation of abiotic stress signal transduction by E3 ubiquitin ligases in Arabidopsis
    • PMID: 21347703
    • Lee JH, Kim WT. Regulation of abiotic stress signal transduction by E3 ubiquitin ligases in Arabidopsis. Mol Cells. 2011; 31: 201-208. doi: 10.1007/s10059-011-0031-9 PMID: 21347703
    • (2011) Mol Cells , vol.31 , pp. 201-208
    • Lee, J.H.1    Kim, W.T.2
  • 3
    • 84885037043 scopus 로고    scopus 로고
    • Plant E3 ligases: Flexible enzymes in a sessile world
    • PMID: 23307436
    • Chen L, Hellmann H. Plant E3 ligases: flexible enzymes in a sessile world. Mol Plant. 2013; 6: 1388-1404. doi: 10.1093/mp/sst005 PMID: 23307436
    • (2013) Mol Plant , vol.6 , pp. 1388-1404
    • Chen, L.1    Hellmann, H.2
  • 4
    • 33644993733 scopus 로고    scopus 로고
    • Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis
    • PMID: 16339806
    • Kraft E, Stone SL, Ma L, Su N, Gao Y, Lau OS, et al. Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. Plant Physiol. 2005; 139: 1597-1611. PMID: 16339806
    • (2005) Plant Physiol , vol.139 , pp. 1597-1611
    • Kraft, E.1    Stone, S.L.2    Ma, L.3    Su, N.4    Gao, Y.5    Lau, O.S.6
  • 5
    • 79551550373 scopus 로고    scopus 로고
    • Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift
    • PMID: 21297981
    • Hua Z, Zou C, Shiu SH, Vierstra RD. Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PLoS One. 2011; 6(1):e16219. doi: 10.1371/journal.pone.0016219 PMID: 21297981
    • (2011) PLoS One , vol.6 , Issue.1
    • Hua, Z.1    Zou, C.2    Shiu, S.H.3    Vierstra, R.D.4
  • 6
    • 0033525589 scopus 로고    scopus 로고
    • A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly
    • PMID: 9989495
    • Koegl M, Hoppe T, Schlenker S, Ulrich HD, Mayer TU, Jentsch S. A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly. Cell. 1999; 96: 35-644. PMID: 9989495
    • (1999) Cell , vol.96 , pp. 35-644
    • Koegl, M.1    Hoppe, T.2    Schlenker, S.3    Ulrich, H.D.4    Mayer, T.U.5    Jentsch, S.6
  • 7
    • 0034708216 scopus 로고    scopus 로고
    • The U box is a modified RING finger - A common domain in ubiquitination
    • PMID: 10704423
    • Aravind L, Koonin EV. The U box is a modified RING finger - a common domain in ubiquitination. Curr Biol. 2000; 10: R132-134. PMID: 10704423
    • (2000) Curr Biol , vol.10 , pp. R132-R134
    • Aravind, L.1    Koonin, E.V.2
  • 8
    • 0035375052 scopus 로고    scopus 로고
    • Interaction of the ring finger-related U-box motif of a nuclear dot protein with ubiquitin-conjugating enzymes
    • PMID: 11274149
    • Pringa E, Martinez-Noel G, Muller U, Harbers K. Interaction of the ring finger-related U-box motif of a nuclear dot protein with ubiquitin-conjugating enzymes. J Biol Chem. 2001; 276: 19617-19623. PMID: 11274149
    • (2001) J Biol Chem , vol.276 , pp. 19617-19623
    • Pringa, E.1    Martinez-Noel, G.2    Muller, U.3    Harbers, K.4
  • 9
    • 14644422554 scopus 로고    scopus 로고
    • Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity
    • PMID: 15377756
    • Zeng LR, Qu S, Bordeos A, Yang C, Baraoidan M, Yan H, et al. Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity. Plant Cell. 2004; 16: 2795-2808. PMID: 15377756
    • (2004) Plant Cell , vol.16 , pp. 2795-2808
    • Zeng, L.R.1    Qu, S.2    Bordeos, A.3    Yang, C.4    Baraoidan, M.5    Yan, H.6
  • 10
    • 64949103026 scopus 로고    scopus 로고
    • Classification, expression pattern, and E3 ligase activity assay of rice U-box-containing proteins
    • PMID: 19825583
    • Zeng LR, Park CH, Venu RC, Gough J, Wang GL. Classification, expression pattern, and E3 ligase activity assay of rice U-box-containing proteins. Mol Plant. 2008; 1: 800-815. doi: 10.1093/mp/ssn044 PMID: 19825583
    • (2008) Mol Plant , vol.1 , pp. 800-815
    • Zeng, L.R.1    Park, C.H.2    Venu, R.C.3    Gough, J.4    Wang, G.L.5
  • 11
    • 64949084332 scopus 로고    scopus 로고
    • The diversity of plant U-box E3 ubiquitin ligases: From upstream activators to downstream target substrates
    • PMID: 19196749
    • Yee D, Goring DR. The diversity of plant U-box E3 ubiquitin ligases: from upstream activators to downstream target substrates. J Exp Bot. 2009; 60: 1109-1121. doi: 10.1093/jxb/ern369 PMID: 19196749
    • (2009) J Exp Bot , vol.60 , pp. 1109-1121
    • Yee, D.1    Goring, D.R.2
  • 12
    • 0038796900 scopus 로고    scopus 로고
    • AtCHIP, a U-box-containing E3 ubiquitin ligase, plays a critical role in temperature stress tolerance in Arabidopsis
    • PMID: 12805616
    • Yan J, Wang J, Li Q, Hwang JR, Patterson C, Zhang H. AtCHIP, a U-box-containing E3 ubiquitin ligase, plays a critical role in temperature stress tolerance in Arabidopsis. Plant Physiol. 2003; 132: 861-869. PMID: 12805616
    • (2003) Plant Physiol , vol.132 , pp. 861-869
    • Yan, J.1    Wang, J.2    Li, Q.3    Hwang, J.R.4    Patterson, C.5    Zhang, H.6
  • 13
    • 33646252495 scopus 로고    scopus 로고
    • AtCHIP functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment
    • PMID: 16640601
    • Luo J, Shen G, Yan J, He C, Zhang H. AtCHIP functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. Plant J. 2006; 46: 649-657. PMID: 16640601
    • (2006) Plant J , vol.46 , pp. 649-657
    • Luo, J.1    Shen, G.2    Yan, J.3    He, C.4    Zhang, H.5
  • 14
    • 33846041276 scopus 로고    scopus 로고
    • The chloroplast protease subunit ClpP4 is a substrate of the E3 ligase AtCHIP and plays an important role in chloroplast function
    • PMID: 17241447
    • Shen G, Yan J, Pasapula V, Luo J, He C, Clarke AK, et al. The chloroplast protease subunit ClpP4 is a substrate of the E3 ligase AtCHIP and plays an important role in chloroplast function. Plant J. 2007; 49: 228-237. PMID: 17241447
    • (2007) Plant J , vol.49 , pp. 228-237
    • Shen, G.1    Yan, J.2    Pasapula, V.3    Luo, J.4    He, C.5    Clarke, A.K.6
  • 15
    • 84865847856 scopus 로고    scopus 로고
    • The U-Box E3 ligase SPL11/PUB13 is a convergence point of defense and flowering signaling in plants
    • PMID: 22659522
    • Liu J, Li W, Ning Y, Shirsekar G, Cai Y, Wang X, et al. The U-Box E3 ligase SPL11/PUB13 is a convergence point of defense and flowering signaling in plants. Plant Physiol. 2012; 160: 28-37. doi: 10.1104/pp.112.199430 PMID: 22659522
    • (2012) Plant Physiol , vol.160 , pp. 28-37
    • Liu, J.1    Li, W.2    Ning, Y.3    Shirsekar, G.4    Cai, Y.5    Wang, X.6
  • 16
    • 84876513409 scopus 로고    scopus 로고
    • UUCD: A family-based database of ubiquitin and ubiquitin-like conjugation
    • PMID: 23172288
    • Gao T, Liu Z, Wang Y, Cheng H, Yang Q, Guo A, et al. UUCD: a family-based database of ubiquitin and ubiquitin-like conjugation. Nucleic Acids Res. 2012; 41: D445-451. doi: 10.1093/nar/gks1103 PMID: 23172288
    • (2012) Nucleic Acids Res , vol.41 , pp. D445-D451
    • Gao, T.1    Liu, Z.2    Wang, Y.3    Cheng, H.4    Yang, Q.5    Guo, A.6
  • 17
    • 57749121498 scopus 로고    scopus 로고
    • Arabidopsis PUB22 and PUB23 are homologous UBox E3 ubiquitin ligases that play combinatory roles in response to drought stress
    • PMID: 18664614
    • Cho SK, Ryu MY, Song C, Kwak JM, Kim WT. Arabidopsis PUB22 and PUB23 are homologous UBox E3 ubiquitin ligases that play combinatory roles in response to drought stress. Plant Cell. 2008; 20: 1899-1914. doi: 10.1105/tpc.108.060699 PMID: 18664614
    • (2008) Plant Cell , vol.20 , pp. 1899-1914
    • Cho, S.K.1    Ryu, M.Y.2    Song, C.3    Kwak, J.M.4    Kim, W.T.5
  • 18
    • 84865846468 scopus 로고    scopus 로고
    • Roles of four Arabidopsis U-box E3 ubiquitin ligases in negative regulation of abscisic acid-mediated drought stress responses
    • PMID: 22829319
    • Seo DH, Ryu MY, Jammes F, Hwang JH, Turek M, Kang BG, et al. Roles of four Arabidopsis U-box E3 ubiquitin ligases in negative regulation of abscisic acid-mediated drought stress responses. Plant Physiol. 2012; 160: 556-568. doi: 10.1104/pp.112.202143 PMID: 22829319
    • (2012) Plant Physiol , vol.160 , pp. 556-568
    • Seo, D.H.1    Ryu, M.Y.2    Jammes, F.3    Hwang, J.H.4    Turek, M.5    Kang, B.G.6
  • 19
    • 67649500149 scopus 로고    scopus 로고
    • Identification of a novel E3 ubiquitin ligase that is required for suppression of premature senescence in Arabidopsis
    • PMID: 19309463
    • Raab S, Drechsel G, Zarepour M, Hartung W, Koshiba T, Bittner F, et al. Identification of a novel E3 ubiquitin ligase that is required for suppression of premature senescence in Arabidopsis. Plant J. 2009; 59: 39-51. doi: 10.1111/j.1365-313X.2009.03846.x PMID: 19309463
    • (2009) Plant J , vol.59 , pp. 39-51
    • Raab, S.1    Drechsel, G.2    Zarepour, M.3    Hartung, W.4    Koshiba, T.5    Bittner, F.6
  • 20
    • 33745449581 scopus 로고    scopus 로고
    • The E3 ubiquitin ligase activity of Arabidopsis PLANT U-BOX17 and its functional tobacco homolog ACRE276 are required for cell death and defense
    • PMID: 16531496
    • Yang CW, Gonzalez-Lamothe R, Ewan RA, Rowland O, Yoshioka H, Shenton M, et al. The E3 ubiquitin ligase activity of arabidopsis PLANT U-BOX17 and its functional tobacco homolog ACRE276 are required for cell death and defense. Plant Cell. 2006; 18: 1084-1098. PMID: 16531496
    • (2006) Plant Cell , vol.18 , pp. 1084-1098
    • Yang, C.W.1    Gonzalez-Lamothe, R.2    Ewan, R.A.3    Rowland, O.4    Yoshioka, H.5    Shenton, M.6
  • 21
    • 33745479207 scopus 로고    scopus 로고
    • The U-box protein CMPG1 is required for efficient activation of defense mechanisms triggered by multiple resistance genes in tobacco and tomato
    • PMID: 16531490
    • Gonzalez-Lamothe R, Tsitsigiannis DI, Ludwig AA, Panicot M, Shirasu K, Jones JD. The U-box protein CMPG1 is required for efficient activation of defense mechanisms triggered by multiple resistance genes in tobacco and tomato. Plant Cell. 2006; 18: 1067-1083. PMID: 16531490
    • (2006) Plant Cell , vol.18 , pp. 1067-1083
    • Gonzalez-Lamothe, R.1    Tsitsigiannis, D.I.2    Ludwig, A.A.3    Panicot, M.4    Shirasu, K.5    Jones, J.D.6
  • 22
    • 84869214196 scopus 로고    scopus 로고
    • A U-Box E3 ubiquitin ligase, PUB20, interacts with the Arabidopsis G-protein beta subunit, AGB1
    • PMID: 23166612
    • Kobayashi S, Tsugama D, Liu S, Takano T. A U-Box E3 ubiquitin ligase, PUB20, interacts with the Arabidopsis G-protein beta subunit, AGB1. PLoS One. 2012; 7(11): e49207. doi: 10.1371/journal.pone.0049207 PMID: 23166612
    • (2012) PLoS One , vol.7 , Issue.11
    • Kobayashi, S.1    Tsugama, D.2    Liu, S.3    Takano, T.4
  • 23
    • 0034708222 scopus 로고    scopus 로고
    • The S receptor kinase determines self-incompatibility in Brassica stigma
    • PMID: 10706292
    • Takasaki T, Hatakeyama K, Suzuki G, Watanabe M, Isogai A, Hinata K. The S receptor kinase determines self-incompatibility in Brassica stigma. Nature. 2000; 403: 913-916. PMID: 10706292
    • (2000) Nature , vol.403 , pp. 913-916
    • Takasaki, T.1    Hatakeyama, K.2    Suzuki, G.3    Watanabe, M.4    Isogai, A.5    Hinata, K.6
  • 24
    • 0035839036 scopus 로고    scopus 로고
    • Gibberellins signal nuclear import of PHOR1, a photo-period-responsive protein with homology to Drosophila armadillo
    • PMID: 11509183
    • Amador V, Monte E, Garcia-Martinez JL, Prat S. Gibberellins signal nuclear import of PHOR1, a photo-period-responsive protein with homology to Drosophila armadillo. Cell. 2001; 106: 343-354. PMID: 11509183
    • (2001) Cell , vol.106 , pp. 343-354
    • Amador, V.1    Monte, E.2    Garcia-Martinez, J.L.3    Prat, S.4
  • 25
    • 84876669344 scopus 로고    scopus 로고
    • The Arabidopsis U-box/ARM repeat E3 ligase AtPUB4 influences growth and degeneration of tapetal cells, and its mutation leads to conditional male sterility
    • PMID: 23398263
    • Wang H, Lu Y, Jiang T, Berg H, Li C, Xia, Y. The Arabidopsis U-box/ARM repeat E3 ligase AtPUB4 influences growth and degeneration of tapetal cells, and its mutation leads to conditional male sterility. Plant J. 2013; 74: 511-523. doi: 10.1111/tpj.12146 PMID: 23398263
    • (2013) Plant J , vol.74 , pp. 511-523
    • Wang, H.1    Lu, Y.2    Jiang, T.3    Berg, H.4    Li, C.5    Xia, Y.6
  • 26
    • 84887471640 scopus 로고    scopus 로고
    • Fluorescent measurement of lipid content in the model organism Chlamydomonas reinhardtii
    • Kou Z, Bei S, Sun J, Pan J. Fluorescent measurement of lipid content in the model organism Chlamydomonas reinhardtii. J Appl Phycol. 2013; 25: 1633-1641.
    • (2013) J Appl Phycol , vol.25 , pp. 1633-1641
    • Kou, Z.1    Bei, S.2    Sun, J.3    Pan, J.4
  • 27
    • 78649503208 scopus 로고    scopus 로고
    • The Medicago truncatula E3 ubiquitin ligase PUB1 interacts with the LYK3 symbiotic receptor and negatively regulates infection and nodulation
    • PMID: 20971894
    • Mbengue M, Camut S, de Carvalho-Niebel F, Deslandes L, Froidure S, Klaus-Heisen D, et al. The Medicago truncatula E3 ubiquitin ligase PUB1 interacts with the LYK3 symbiotic receptor and negatively regulates infection and nodulation. Plant Cell. 2010; 22: 3474-3488. doi: 10.1105/tpc.110.075861 PMID: 20971894
    • (2010) Plant Cell , vol.22 , pp. 3474-3488
    • Mbengue, M.1    Camut, S.2    De Carvalho-Niebel, F.3    Deslandes, L.4    Froidure, S.5    Klaus-Heisen, D.6
  • 28
    • 70349522135 scopus 로고    scopus 로고
    • CERBERUS, a novel Ubox protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobium symbiosis
    • PMID: 19508425
    • Yano K, Shibata S, Chen WL, Sato S, Kaneko T, Jurkiewicz A, et al. CERBERUS, a novel Ubox protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobium symbiosis. Plant J. 2009; 60: 168-180. doi: 10.1111/j.1365-313X.2009.03943.x PMID: 19508425
    • (2009) Plant J , vol.60 , pp. 168-180
    • Yano, K.1    Shibata, S.2    Chen, W.L.3    Sato, S.4    Kaneko, T.5    Jurkiewicz, A.6
  • 29
    • 84863770099 scopus 로고    scopus 로고
    • Molecular cloning and characterization of OsUPS, a U-box containing E3 ligase gene that respond to phosphate starvation in rice (Oryza sativa)
    • PMID: 22201023
    • Hur YJ, Yi YB, Lee JH, Chung YS, Jung HW, Yun DJ, et al. Molecular cloning and characterization of OsUPS, a U-box containing E3 ligase gene that respond to phosphate starvation in rice (Oryza sativa). Mol Biol Rep. 2012; 39: 5883-5888. doi: 10.1007/s11033-011-1399-5 PMID: 22201023
    • (2012) Mol Biol Rep , vol.39 , pp. 5883-5888
    • Hur, Y.J.1    Yi, Y.B.2    Lee, J.H.3    Chung, Y.S.4    Jung, H.W.5    Yun, D.J.6
  • 30
    • 53749090930 scopus 로고    scopus 로고
    • Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis
    • PMID: 18552232
    • Samuel MA, Mudgil Y, Salt JN, Delmas F, Ramachandran S, Chilelli A, et al. Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis. Plant Physiol. 2008; 147: 2084-2095. doi: 10.1104/pp.108.123380 PMID: 18552232
    • (2008) Plant Physiol , vol.147 , pp. 2084-2095
    • Samuel, M.A.1    Mudgil, Y.2    Salt, J.N.3    Delmas, F.4    Ramachandran, S.5    Chilelli, A.6
  • 31
    • 84905270268 scopus 로고    scopus 로고
    • The S-domain receptor kinase AtARK2 and the U-box/ARM-repeat-containing E3 ubiquitin ligase AtPUB9 module mediates lateral root development under phosphate starvation in Arabidopsis
    • PMID: 24965176
    • Deb S, Sankaranarayanan S, Wewala G, Widdup EE, Samuel MA. The S-domain receptor kinase AtARK2 and the U-box/ARM-repeat-Containing E3 ubiquitin ligase AtPUB9 module mediates lateral root development under phosphate starvation in Arabidopsis. Plant Physiol. 2014; 165: 1647-1656. PMID: 24965176
    • (2014) Plant Physiol , vol.165 , pp. 1647-1656
    • Deb, S.1    Sankaranarayanan, S.2    Wewala, G.3    Widdup, E.E.4    Samuel, M.A.5
  • 33
    • 78649786133 scopus 로고    scopus 로고
    • Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism
    • PMID: 20935180
    • Miller R, Wu G, Deshpande RR, Vieler A, Gartner K, Li X, et al. Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism. Plant Physiol. 2010; 154: 1737-1752. doi: 10.1104/pp.110.165159 PMID: 20935180
    • (2010) Plant Physiol , vol.154 , pp. 1737-1752
    • Miller, R.1    Wu, G.2    Deshpande, R.R.3    Vieler, A.4    Gartner, K.5    Li, X.6
  • 34
    • 84856616925 scopus 로고    scopus 로고
    • Proteomic profiling of oil bodies isolated from the unicellular green microalga Chlamydomonas reinhardtii: With focus on proteins involved in lipid metabolism
    • PMID: 21928291
    • Nguyen HM, Baudet M, Cuine S, Adriano JM, Barthe D, Billon E, et al. Proteomic profiling of oil bodies isolated from the unicellular green microalga Chlamydomonas reinhardtii: with focus on proteins involved in lipid metabolism. Proteomics. 2011; 11: 4266-4273. doi: 10.1002/pmic.201100114 PMID: 21928291
    • (2011) Proteomics , vol.11 , pp. 4266-4273
    • Nguyen, H.M.1    Baudet, M.2    Cuine, S.3    Adriano, J.M.4    Barthe, D.5    Billon, E.6
  • 35
    • 84880337549 scopus 로고    scopus 로고
    • Detection of algal lipid accumulation due to nitrogen limitation via dielectric spectroscopy of Chlamydomonas reinhardtii suspensions in a coaxial transmission line sample cell
    • PMID: 23845710
    • Bono MS Jr, Ahner BA, Kirby BJ. Detection of algal lipid accumulation due to nitrogen limitation via dielectric spectroscopy of Chlamydomonas reinhardtii suspensions in a coaxial transmission line sample cell. Bioresour Technol. 2013; 143: 623-631. doi: 10.1016/j.biortech.2013.06.040 PMID: 23845710
    • (2013) Bioresour Technol , vol.143 , pp. 623-631
    • Bono, M.S.1    Ahner, B.A.2    Kirby, B.J.3
  • 36
    • 84882726298 scopus 로고    scopus 로고
    • Triacylglycerol profiling of microalgae Chlamydomonas reinhardtii and Nannochloropsis oceanica
    • PMID: 23948268
    • Liu B, Vieler A, Li C, Jones AD, Benning C. Triacylglycerol profiling of microalgae Chlamydomonas reinhardtii and Nannochloropsis oceanica. Bioresour Technol. 2013; 146: 310-316. doi: 10.1016/j.biortech.2013.07.088 PMID: 23948268
    • (2013) Bioresour Technol , vol.146 , pp. 310-316
    • Liu, B.1    Vieler, A.2    Li, C.3    Jones, A.D.4    Benning, C.5
  • 37
    • 0016796673 scopus 로고
    • Gametic differentiation in Chlamydomonas reinhardtii. I. Production of gametes and their fine structure
    • PMID: 1202015
    • Martin NC, Goodenough UW. Gametic differentiation in Chlamydomonas reinhardtii. I. Production of gametes and their fine structure. J Cell Biol. 1975; 67: 587-605. PMID: 1202015
    • (1975) J Cell Biol , vol.67 , pp. 587-605
    • Martin, N.C.1    Goodenough, U.W.2
  • 38
    • 84896768677 scopus 로고    scopus 로고
    • Integrated quantitative analysis of nitrogen stress response in Chlamydomonas reinhardtii using metabolite and protein profiling
    • PMID: 24528286
    • Wase N, Black PN, Stanley BA, DiRusso CC. Integrated quantitative analysis of nitrogen stress response in Chlamydomonas reinhardtii using metabolite and protein profiling. J Proteome Res. 2014; 13: 1373-1396. doi: 10.1021/pr400952z PMID: 24528286
    • (2014) J Proteome Res , vol.13 , pp. 1373-1396
    • Wase, N.1    Black, P.N.2    Stanley, B.A.3    DiRusso, C.C.4
  • 39
    • 84901420221 scopus 로고    scopus 로고
    • Nitrogen-sparing mechanisms in Chlamydomonas affect the transcriptome, the proteome, and photosynthetic metabolism
    • PMID: 24748044
    • Schmollinger S, Muhlhaus T, Boyle NR, Blaby IK, Casero D, Mettler T, et al. Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism. Plant Cell. 2014; 26: 1410-1435. PMID: 24748044
    • (2014) Plant Cell , vol.26 , pp. 1410-1435
    • Schmollinger, S.1    Muhlhaus, T.2    Boyle, N.R.3    Blaby, I.K.4    Casero, D.5    Mettler, T.6
  • 40
    • 84867161579 scopus 로고    scopus 로고
    • System response of metabolic networks in Chlamydomonas reinhardtii to total available ammonium
    • PMID: 22787274
    • Lee do Y, Park JJ, Barupal DK, Fiehn O. System response of metabolic networks in Chlamydomonas reinhardtii to total available ammonium. Mol Cell Proteomics. 2012; 11: 973-988. PMID: 22787274
    • (2012) Mol Cell Proteomics , vol.11 , pp. 973-988
    • Lee Do, Y.1    Park, J.J.2    Barupal, D.K.3    Fiehn, O.4
  • 41
    • 84860229900 scopus 로고    scopus 로고
    • In silico cloning and characterization of the Glycerol-3-Phosphate Dehydrogenase (GPDH) gene family in the green microalga Chlamydomonas reinhardtii
    • PMID: 22358185
    • Herrera-Valencia VA, Macario-Gonzalez LA, Casais-Molina ML, Beltran-Aguilar AG, Peraza-Echeverria S. In silico cloning and characterization of the glycerol-3-phosphate dehydrogenase (GPDH) gene family in the green microalga Chlamydomonas reinhardtii. Curr Microbiol. 2012; 64: 477-485. doi: 10.1007/s00284-012-0095-6 PMID: 22358185
    • (2012) Curr Microbiol , vol.64 , pp. 477-485
    • Herrera-Valencia, V.A.1    Macario-Gonzalez, L.A.2    Casais-Molina, M.L.3    Beltran-Aguilar, A.G.4    Peraza-Echeverria, S.5
  • 42
    • 84868092906 scopus 로고    scopus 로고
    • Phospholipid:Diacylglycerol acyltransferase is a multifunctional enzyme involved in membrane lipid turnover and degradation while synthesizing triacylglycerol in the unicellular green microalga Chlamydomonas reinhardtii
    • PMID: 23012436
    • Yoon K, Han D, Li Y, Sommerfeld M, Hu Q. Phospholipid:diacylglycerol acyltransferase is a multifunctional enzyme involved in membrane lipid turnover and degradation while synthesizing triacylglycerol in the unicellular green microalga Chlamydomonas reinhardtii. Plant Cell. 2012; 24: 3708-3724. doi: 10.1105/tpc.112.100701 PMID: 23012436
    • (2012) Plant Cell , vol.24 , pp. 3708-3724
    • Yoon, K.1    Han, D.2    Li, Y.3    Sommerfeld, M.4    Hu, Q.5
  • 43
    • 84860864006 scopus 로고    scopus 로고
    • Three acyltransferases and nitrogenresponsive regulator are implicated in nitrogen starvation-induced triacylglycerol accumulation in Chlamydomonas
    • PMID: 22403401
    • Boyle NR, Page MD, Liu B, Blaby IK, Casero D, Kropat J, et al. Three acyltransferases and nitrogenresponsive regulator are implicated in nitrogen starvation-induced triacylglycerol accumulation in Chlamydomonas. J Biol Chem. 2012; 287: 15811-15825. doi: 10.1074/jbc.M111.334052 PMID: 22403401
    • (2012) J Biol Chem , vol.287 , pp. 15811-15825
    • Boyle, N.R.1    Page, M.D.2    Liu, B.3    Blaby, I.K.4    Casero, D.5    Kropat, J.6
  • 44
    • 0025046096 scopus 로고
    • Ubiquitin in Chlamydomonas reinhardii. Distribution in the cell and effect of heat shock and photoinhibition on its conjugate pattern
    • PMID: 2167845
    • Wettern M, Parag HA, Pollmann L, Ohad I, Kulka RG. Ubiquitin in Chlamydomonas reinhardii. Distribution in the cell and effect of heat shock and photoinhibition on its conjugate pattern. Eur J Biochem. 1990; 191: 571-576. PMID: 2167845
    • (1990) Eur J Biochem , vol.191 , pp. 571-576
    • Wettern, M.1    Parag, H.A.2    Pollmann, L.3    Ohad, I.4    Kulka, R.G.5
  • 45
    • 41649104181 scopus 로고    scopus 로고
    • The green yeast uses its plant-like clock to regulate its animal-like tail
    • PMID: 18381887
    • Brunner M, Merrow M. The green yeast uses its plant-like clock to regulate its animal-like tail. Genes Dev. 2008; 22: 825-831. doi: 10.1101/gad.1664508 PMID: 18381887
    • (2008) Genes Dev , vol.22 , pp. 825-831
    • Brunner, M.1    Merrow, M.2
  • 46
    • 69449094091 scopus 로고    scopus 로고
    • The ubiquitin conjugation system is involved in the disassembly of cilia and flagella
    • PMID: 19704024
    • Huang K, Diener DR, Rosenbaum JL. The ubiquitin conjugation system is involved in the disassembly of cilia and flagella. J Cell Biol. 2009; 186: 601-613. doi: 10.1083/jcb.200903066 PMID: 19704024
    • (2009) J Cell Biol , vol.186 , pp. 601-613
    • Huang, K.1    Diener, D.R.2    Rosenbaum, J.L.3
  • 47
    • 77955358823 scopus 로고    scopus 로고
    • Diversification and specialization of plant RBR ubiquitin ligases
    • PMID: 20644651
    • Marin I. Diversification and Specialization of Plant RBR Ubiquitin Ligases. PLoS One. 2010; 5: e11579. doi: 10.1371/journal.pone.0011579 PMID: 20644651
    • (2010) PLoS One , vol.5
    • Marin, I.1
  • 49
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • PMID: 14530136
    • Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 2003; 52: 696-704. PMID: 14530136
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 50
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: Molecular Evolutionary Genetics Analysis version 6.0
    • PMID: 24132122
    • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol. 2013; 30: 2725-2729. doi: 10.1093/molbev/mst197 PMID: 24132122
    • (2013) Mol Biol Evol , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 51
    • 8444222059 scopus 로고    scopus 로고
    • Tandem inverted repeat system for selection of effective transgenic RNAi strains in Chlamydomonas
    • PMID: 15500475
    • Rohr J, Sarkar N, Balenger S, Jeong BR, Cerutti H. Tandem inverted repeat system for selection of effective transgenic RNAi strains in Chlamydomonas. Plant J. 2004; 40: 611-621. PMID: 15500475
    • (2004) Plant J , vol.40 , pp. 611-621
    • Rohr, J.1    Sarkar, N.2    Balenger, S.3    Jeong, B.R.4    Cerutti, H.5
  • 52
    • 62349095514 scopus 로고    scopus 로고
    • A high throughput Nile red method for quantitative measurement of neutral lipids in microalgae
    • PMID: 19162091
    • Chen W, Zhang C, Song L, Sommerfeld M, Hu Q. A high throughput Nile red method for quantitative measurement of neutral lipids in microalgae. J Microbiol Methods. 2009; 77: 41-47. doi: 10.1016/j.mimet.2009.01.001 PMID: 19162091
    • (2009) J Microbiol Methods , vol.77 , pp. 41-47
    • Chen, W.1    Zhang, C.2    Song, L.3    Sommerfeld, M.4    Hu, Q.5
  • 53
    • 0035980094 scopus 로고    scopus 로고
    • U box proteins as a new family of ubiquitin-protein ligases
    • PMID: 11435423
    • Hatakeyama S, Yada M, Matsumoto M, Ishida N, Nakayama KI. U box proteins as a new family of ubiquitin-protein ligases. J Biol Chem. 2001; 276: 33111-33120. PMID: 11435423
    • (2001) J Biol Chem. , vol.276 , pp. 33111-33120
    • Hatakeyama, S.1    Yada, M.2    Matsumoto, M.3    Ishida, N.4    Nakayama, K.I.5
  • 55
    • 35348896591 scopus 로고    scopus 로고
    • The Chlamydomonas genome reveals the evolution of key animal and plant functions
    • PMID: 17932292
    • Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, et al. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science. 2007; 318: 245-250. PMID: 17932292
    • (2007) Science , vol.318 , pp. 245-250
    • Merchant, S.S.1    Prochnik, S.E.2    Vallon, O.3    Harris, E.H.4    Karpowicz, S.J.5    Witman, G.B.6
  • 56
    • 33845619068 scopus 로고    scopus 로고
    • Heterologous expression and molecular and cellular characterization of CaPUB1 encoding a hot pepper U-Box E3 ubiquitin ligase homolog
    • PMID: 17041029
    • Cho SK, Chung HS, Ryu MY, Park MJ, Lee MM, Bahk YY, et al. Heterologous expression and molecular and cellular characterization of CaPUB1 encoding a hot pepper U-Box E3 ubiquitin ligase homolog. Plant Physiol. 2006; 142: 1664-1682. PMID: 17041029
    • (2006) Plant Physiol , vol.142 , pp. 1664-1682
    • Cho, S.K.1    Chung, H.S.2    Ryu, M.Y.3    Park, M.J.4    Lee, M.M.5    Bahk, Y.Y.6
  • 57
    • 48249156236 scopus 로고    scopus 로고
    • Biochemical function of typical and variant Arabidopsis thaliana Ubox E3 ubiquitin-protein ligases
    • PMID: 18393940
    • Wiborg J, O'Shea C, Skriver K. Biochemical function of typical and variant Arabidopsis thaliana Ubox E3 ubiquitin-protein ligases. Biochem J. 2008; 413: 447-457. doi: 10.1042/BJ20071568 PMID: 18393940
    • (2008) Biochem J , vol.413 , pp. 447-457
    • Wiborg, J.1    O'Shea, C.2    Skriver, K.3
  • 58
    • 0842264053 scopus 로고    scopus 로고
    • A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family
    • PMID: 14657406
    • Mudgil Y, Shiu SH, Stone SL, Salt JN, Goring DR. A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family. Plant Physiol. 2004; 134: 59-66. PMID: 14657406
    • (2004) Plant Physiol , vol.134 , pp. 59-66
    • Mudgil, Y.1    Shiu, S.H.2    Stone, S.L.3    Salt, J.N.4    Goring, D.R.5
  • 59
    • 84901048926 scopus 로고    scopus 로고
    • Plasma membraneassociation of SAUL1-type plant U-box armadillo repeat proteins is conserved in land plants
    • PMID: 24600457
    • Vogelmann K, Subert C, Danzberger N, Drechsel G, Bergler J, Kotur T, et al. Plasma membraneassociation of SAUL1-type plant U-box armadillo repeat proteins is conserved in land plants. Front Plant Sci. 2014; 5: 37. doi: 10.3389/fpls.2014.00037 PMID: 24600457
    • (2014) Front Plant Sci , vol.5 , pp. 37
    • Vogelmann, K.1    Subert, C.2    Danzberger, N.3    Drechsel, G.4    Bergler, J.5    Kotur, T.6
  • 60
    • 0027033951 scopus 로고
    • Expression of antisense or sense RNA of an ankyrin repeat-containing gene blocks chloroplast differentiation in Arabidopsis
    • PMID: 1281700
    • Zhang H, Scheirer DC, FowleWH, Goodman HM. Expression of antisense or sense RNA of an ankyrin repeat-containing gene blocks chloroplast differentiation in Arabidopsis. Plant Cell. 1992; 4: 1575-1588. PMID: 1281700
    • (1992) Plant Cell , vol.4 , pp. 1575-1588
    • Zhang, H.1    Scheirer, D.C.2    Fowle, W.H.3    Goodman, H.M.4
  • 61
    • 0142028809 scopus 로고    scopus 로고
    • ACD6, a novel ankyrin protein, is a regulator and an effector of salicylic acid signaling in the Arabidopsis defense response
    • PMID: 14507999
    • Lu H, Rate DN, Song JT, Greenberg JT. ACD6, a novel ankyrin protein, is a regulator and an effector of salicylic acid signaling in the Arabidopsis defense response. Plant Cell. 2003; 15: 2408-2420. PMID: 14507999
    • (2003) Plant Cell , vol.15 , pp. 2408-2420
    • Lu, H.1    Rate, D.N.2    Song, J.T.3    Greenberg, J.T.4
  • 62
    • 77950915395 scopus 로고    scopus 로고
    • Molecular characterization of rice OsBIANK1, encoding a plasma membrane-anchored ankyrin repeat protein, and its inducible expression in defense responses
    • PMID: 19288292
    • Zhang X, Li D, Zhang H, Wang X, Zheng Z, Song F. Molecular characterization of rice OsBIANK1, encoding a plasma membrane-anchored ankyrin repeat protein, and its inducible expression in defense responses. Mol Biol Rep. 2010; 37: 653-660. doi: 10.1007/s11033-009-9507-5 PMID: 19288292
    • (2010) Mol Biol Rep , vol.37 , pp. 653-660
    • Zhang, X.1    Li, D.2    Zhang, H.3    Wang, X.4    Zheng, Z.5    Song, F.6
  • 63
    • 84901331596 scopus 로고    scopus 로고
    • Exploring the role of a stigma-expressed plant U-box gene in the pollination responses of transgenic self-incompatible Arabidopsis thaliana
    • PMID: 24573467
    • Zhang J, Rea AC, Fu T, Ma C, Nasrallah JB. Exploring the role of a stigma-expressed plant U-box gene in the pollination responses of transgenic self-incompatible Arabidopsis thaliana. Plant Reprod. 2014; 27: 59-68. doi: 10.1007/s00497-014-0240-4 PMID: 24573467
    • (2014) Plant Reprod. , vol.27 , pp. 59-68
    • Zhang, J.1    Rea, A.C.2    Fu, T.3    Ma, C.4    Nasrallah, J.B.5
  • 64
    • 85046982566 scopus 로고    scopus 로고
    • PUB13, a U-box/ARM E3 ligase, regulates plant defense, cell death, and flowering time
    • PMID: 22827949
    • Li W, Dai L, Wang GL. PUB13, a U-box/ARM E3 ligase, regulates plant defense, cell death, and flowering time. Plant Signal Behav. 2012; 7: 898-900. doi: 10.4161/psb.20703 PMID: 22827949
    • (2012) Plant Signal Behav , vol.7 , pp. 898-900
    • Li, W.1    Dai, L.2    Wang, G.L.3
  • 65
    • 84891162708 scopus 로고    scopus 로고
    • Effect of nitrogen concentration on lipid productivity and fatty acid composition of Monoraphidium sp
    • PMID: 24360518
    • Dhup S, Dhawan V. Effect of nitrogen concentration on lipid productivity and fatty acid composition of Monoraphidium sp. Bioresour Technol. 2014; 152: 572-575. doi: 10.1016/j.biortech.2013.11.068 PMID: 24360518
    • (2014) Bioresour Technol , vol.152 , pp. 572-575
    • Dhup, S.1    Dhawan, V.2
  • 66
    • 35148872652 scopus 로고    scopus 로고
    • The E3 ligase AtCHIP ubiquitylates FtsH1, a component of the chloroplast FtsH protease, and affects protein degradation in chloroplasts
    • PMID: 17714429
    • Shen G, Adam Z, Zhang H. The E3 ligase AtCHIP ubiquitylates FtsH1, a component of the chloroplast FtsH protease, and affects protein degradation in chloroplasts. Plant J. 2007; 52: 309-321. PMID: 17714429
    • (2007) Plant J , vol.52 , pp. 309-321
    • Shen, G.1    Adam, Z.2    Zhang, H.3
  • 67
    • 79961023324 scopus 로고    scopus 로고
    • Plant U-box armadillo repeat proteins AtPUB18 and AtPUB19 are involved in salt inhibition of germination in Arabidopsis
    • PMID: 21815976
    • Bergler J, Hoth S. Plant U-box armadillo repeat proteins AtPUB18 and AtPUB19 are involved in salt inhibition of germination in Arabidopsis. Plant Biol (Stuttg). 2011; 13: 725-730. doi: 10.1111/j.1438-8677.2010.00431.x PMID: 21815976
    • (2011) Plant Biol (Stuttg) , vol.13 , pp. 725-730
    • Bergler, J.1    Hoth, S.2
  • 68
    • 82255194156 scopus 로고    scopus 로고
    • AtPUB19, a U-box E3 ubiquitin ligase, negatively regulates abscisic acid and drought responses in Arabidopsis thaliana
    • PMID: 21502661
    • Liu YC, Wu YR, Huang XH, Sun J, Xie Q. AtPUB19, a U-box E3 ubiquitin ligase, negatively regulates abscisic acid and drought responses in Arabidopsis thaliana. Mol Plant. 2011; 4: 938-946. doi: 10.1093/mp/ssr030 PMID: 21502661
    • (2011) Mol Plant , vol.4 , pp. 938-946
    • Liu, Y.C.1    Wu, Y.R.2    Huang, X.H.3    Sun, J.4    Xie, Q.5
  • 69
    • 79959579848 scopus 로고    scopus 로고
    • Altered germination and subcellular localization patterns for PUB44/SAUL1 in response to stress and phytohormone treatments
    • PMID: 21738636
    • Salt JN, Yoshioka K, Moeder W, Goring DR. Altered germination and subcellular localization patterns for PUB44/SAUL1 in response to stress and phytohormone treatments. PLoS One. 2011. 6: e21321. doi: 10.1371/journal.pone.0021321 PMID: 21738636
    • (2011) PLoS One , vol.6
    • Salt, J.N.1    Yoshioka, K.2    Moeder, W.3    Goring, D.R.4
  • 70
    • 78651399515 scopus 로고    scopus 로고
    • OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment
    • PMID: 21223385
    • Park JJ, Yi J, Yoon J, Cho LH, Ping J, Jeong HJ, et al. OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment. Plant J. 2011; 65: 194-205. doi: 10.1111/j.1365-313X.2010.04416.x PMID: 21223385
    • (2011) Plant J , vol.65 , pp. 194-205
    • Park, J.J.1    Yi, J.2    Yoon, J.3    Cho, L.H.4    Ping, J.5    Jeong, H.J.6
  • 71
    • 0642280695 scopus 로고    scopus 로고
    • CHRK1, a chitinase-related receptor-like kinase, interacts with NtPUB4, an armadillo repeat protein, in tobacco
    • PMID: 14499588
    • Kim M, Cho HS, Kim DM, Lee JH, Pai HS. CHRK1, a chitinase-related receptor-like kinase, interacts with NtPUB4, an armadillo repeat protein, in tobacco. Biochim Biophys Acta. 2003; 1651: 50-59. PMID: 14499588
    • (2003) Biochim Biophys Acta , vol.1651 , pp. 50-59
    • Kim, M.1    Cho, H.S.2    Kim, D.M.3    Lee, J.H.4    Pai, H.S.5


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