-
1
-
-
0024496311
-
Lysine 2,3-aminomutase. Support for a mechanism of hydrogen transfer involving S-adenosylmethionine
-
Baraniak, J., Moss, M. L. & Frey, P. A. Lysine 2,3-aminomutase. Support for a mechanism of hydrogen transfer involving S-adenosylmethionine. J. Biol. Chem. 264, 1357-1360 (1989).
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1357-1360
-
-
Baraniak, J.1
Moss, M.L.2
Frey, P.A.3
-
2
-
-
0023645851
-
The role of S-adenosylmethionine in the lysine 2,3-aminomutase reaction
-
Moss, M. & Frey, P. A. The role of S-adenosylmethionine in the lysine 2,3-aminomutase reaction. J. Biol. Chem. 262, 14859-14862 (1987).
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14859-14862
-
-
Moss, M.1
Frey, P.A.2
-
3
-
-
0026606405
-
An organic radical in the lysine 2,3-aminomutase reaction
-
Ballinger, M. D., Reed, G. H. & Frey, P. A. An organic radical in the lysine 2,3-aminomutase reaction. Biochemistry 31, 949-953 (1992).
-
(1992)
Biochemistry
, vol.31
, pp. 949-953
-
-
Ballinger, M.D.1
Reed, G.H.2
Frey, P.A.3
-
4
-
-
0034673538
-
Pyruvate formate-lyase-activating enzyme: Strictly anaerobic isolation yields active enzyme containing a [3Fe-4S](+) cluster
-
Broderick, J. B. et al. Pyruvate formate-lyase-activating enzyme: strictly anaerobic isolation yields active enzyme containing a [3Fe-4S](+) cluster. Biochem. Biophys. Res. Commun. 269, 451-456 (2000).
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.269
, pp. 451-456
-
-
Broderick, J.B.1
-
5
-
-
0034792676
-
Radical mechanisms of S-adenosylmethionine dependent enzymes
-
Frey, P. A. & Booker, S. J. Radical mechanisms of S-adenosylmethionine dependent enzymes. Adv. Protein Chem. 58, 1-45 (2001).
-
(2001)
Adv. Protein Chem.
, vol.58
, pp. 1-45
-
-
Frey, P.A.1
Booker, S.J.2
-
6
-
-
0032562217
-
S-adenosylmethionine-dependent reduction of lysine 2,3-aminomutase and observation of the catalytically functional iron-sulfur centers by electron paramagnetic resonance
-
Lieder, K. W. et al. S-adenosylmethionine-dependent reduction of lysine 2,3-aminomutase and observation of the catalytically functional iron-sulfur centers by electron paramagnetic resonance. Biochemistry 37, 2578-2585 (1998).
-
(1998)
Biochemistry
, vol.37
, pp. 2578-2585
-
-
Lieder, K.W.1
-
7
-
-
0035282866
-
Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: Functional characterization using new analysis and information visualization methods
-
Sofia, H. J., Chen, G., Hetzler, B. G., Reyes-Spindola, J. F. & Miller, N. E. Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods. Nucleic Acids Res. 29, 1097-1106 (2001).
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1097-1106
-
-
Sofia, H.J.1
Chen, G.2
Hetzler, B.G.3
Reyes-Spindola, J.F.4
Miller, N.E.5
-
8
-
-
78649637486
-
S-adenosylmethionine-dependent radical-based modification of biological macromolecules
-
Atta, M. et al. S-adenosylmethionine-dependent radical-based modification of biological macromolecules. Curr. Opin. Struct. Biol. 20, 684-692 (2010).
-
(2010)
Curr. Opin. Struct. Biol.
, vol.20
, pp. 684-692
-
-
Atta, M.1
-
10
-
-
84866021687
-
Structural diversity in the AdoMet radical enzyme superfamily
-
Dowling, D. P., Vey, J. L., Croft, A. K. & Drennan, C. L. Structural diversity in the AdoMet radical enzyme superfamily. Biochim. Biophys. Acta 1824, 1178-1195 (2012).
-
(2012)
Biochim. Biophys. Acta
, vol.1824
, pp. 1178-1195
-
-
Dowling, D.P.1
Vey, J.L.2
Croft, A.K.3
Drennan, C.L.4
-
11
-
-
0037174377
-
An anchoring role for FeS clusters: Chelation of the amino acid moiety of S-adenosylmethionine to the unique iron site of the [4Fe-4S] cluster of pyruvate formate-lyase activating enzyme
-
Walsby, C. J., Ortillo, D., Broderick, W. E., Broderick, J. B. & Hoffman, B. M. An anchoring role for FeS clusters: chelation of the amino acid moiety of S-adenosylmethionine to the unique iron site of the [4Fe-4S] cluster of pyruvate formate-lyase activating enzyme. J. Am. Chem. Soc. 124, 11270-11271 (2002).
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 11270-11271
-
-
Walsby, C.J.1
Ortillo, D.2
Broderick, W.E.3
Broderick, J.B.4
Hoffman, B.M.5
-
12
-
-
39849096603
-
The radical SAM superfamily
-
Frey, P. A., Hegeman, A. D. & Ruzicka, F. J. The radical SAM superfamily. Crit. Rev. Biochem. Mol. Biol. 43, 63-88 (2008).
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 63-88
-
-
Frey, P.A.1
Hegeman, A.D.2
Ruzicka, F.J.3
-
13
-
-
84355162021
-
Intermediates in the transformation of phosphonates to phosphate by bacteria
-
Kamat, S. S., Williams, H. J. & Raushel, F. M. Intermediates in the transformation of phosphonates to phosphate by bacteria. Nature 480, 570-573 (2011).
-
(2011)
Nature
, vol.480
, pp. 570-573
-
-
Kamat, S.S.1
Williams, H.J.2
Raushel, F.M.3
-
14
-
-
84877584386
-
The catalytic mechanism for aerobic formation of methane by bacteria
-
Kamat, S. S., Williams, H. J., Dangott, L. J., Chakrabarti, M. & Raushel, F. M. The catalytic mechanism for aerobic formation of methane by bacteria. Nature 497, 132-136 (2013).
-
(2013)
Nature
, vol.497
, pp. 132-136
-
-
Kamat, S.S.1
Williams, H.J.2
Dangott, L.J.3
Chakrabarti, M.4
Raushel, F.M.5
-
15
-
-
73649096195
-
Identification and characterization of a novel member of the radical AdoMet enzyme superfamily and implications for the biosynthesis of the Hmd hydrogenase active site cofactor
-
McGlynn, S. E. et al. Identification and characterization of a novel member of the radical AdoMet enzyme superfamily and implications for the biosynthesis of the Hmd hydrogenase active site cofactor. J. Bacteriol. 192, 595-598 (2010).
-
(2010)
J. Bacteriol.
, vol.192
, pp. 595-598
-
-
McGlynn, S.E.1
-
16
-
-
84897116014
-
Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism
-
Dowling, D. P. et al. Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism. Nat. Chem. Biol. 10, 106-112 (2014).
-
(2014)
Nat. Chem. Biol.
, vol.10
, pp. 106-112
-
-
Dowling, D.P.1
-
17
-
-
67650729745
-
The structural and biochemical foundations of thiamin biosynthesis
-
Jurgenson, C. T., Begley, T. P. & Ealick, S. E. The structural and biochemical foundations of thiamin biosynthesis. Annu. Rev. Biochem. 78, 569-603 (2009).
-
(2009)
Annu. Rev. Biochem.
, vol.78
, pp. 569-603
-
-
Jurgenson, C.T.1
Begley, T.P.2
Ealick, S.E.3
-
18
-
-
56249110190
-
Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily
-
Chatterjee, A. et al. Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily. Nat. Chem. Biol. 4, 758-765 (2008).
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 758-765
-
-
Chatterjee, A.1
-
19
-
-
78149460648
-
A 'radical dance' in thiamin biosynthesis: Mechanistic analysis of the bacterial hydroxymethylpyrimidine phosphate synthase
-
Chatterjee, A., Hazra, A. B., Abdelwahed, S., Hilmey, D. G. & Begley, T. P. A 'radical dance' in thiamin biosynthesis: mechanistic analysis of the bacterial hydroxymethylpyrimidine phosphate synthase. Angew. Chem. Int. Ed. Engl. 49, 8653-8656 (2010).
-
(2010)
Angew. Chem. Int. Ed. Engl.
, vol.49
, pp. 8653-8656
-
-
Chatterjee, A.1
Hazra, A.B.2
Abdelwahed, S.3
Hilmey, D.G.4
Begley, T.P.5
-
20
-
-
84888039165
-
High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thaliana
-
Coquille, S. et al. High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thaliana. J. Struct. Biol. 184, 438-444 (2013).
-
(2013)
J. Struct. Biol.
, vol.184
, pp. 438-444
-
-
Coquille, S.1
-
21
-
-
84886893789
-
The thiamine biosynthetic enzyme ThiC catalyzes multiple turnovers and is inhibited by S-adenosylmethionine (AdoMet) metabolites
-
Palmer, L. D. & Downs, D. M. The thiamine biosynthetic enzyme ThiC catalyzes multiple turnovers and is inhibited by S-adenosylmethionine (AdoMet) metabolites. J. Biol. Chem. 288, 30693-30699 (2013).
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 30693-30699
-
-
Palmer, L.D.1
Downs, D.M.2
-
22
-
-
49649115936
-
X-ray structure of the [FeFe]-hydrogenase maturase HydE from Thermotoga maritima
-
Nicolet, Y. et al. X-ray structure of the [FeFe]-hydrogenase maturase HydE from Thermotoga maritima. J. Biol. Chem. 283, 18861-18872 (2008).
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 18861-18872
-
-
Nicolet, Y.1
-
23
-
-
78650493707
-
Regioselectivity in the homolytic cleavage of Sadenosylmethionine
-
Kampmeier, J. A. Regioselectivity in the homolytic cleavage of Sadenosylmethionine. Biochemistry 49, 10770-10772 (2010).
-
(2010)
Biochemistry
, vol.49
, pp. 10770-10772
-
-
Kampmeier, J.A.1
-
24
-
-
0346727529
-
Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme
-
Berkovitch, F., Nicolet, Y., Wan, J. T., Jarrett, J. T. & Drennan, C. L. Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme. Science 303, 76-79 (2004).
-
(2004)
Science
, vol.303
, pp. 76-79
-
-
Berkovitch, F.1
Nicolet, Y.2
Wan, J.T.3
Jarrett, J.T.4
Drennan, C.L.5
-
25
-
-
0034912671
-
Radical mechanisms of enzymatic catalysis
-
Frey, P. A. Radical mechanisms of enzymatic catalysis. Annu. Rev. Biochem. 70, 121-148 (2001).
-
(2001)
Annu. Rev. Biochem.
, vol.70
, pp. 121-148
-
-
Frey, P.A.1
-
26
-
-
0035903592
-
Radical shuttling in a protein: Ribose pseudorotation controls alkyl-radical transfer in the coenzyme B(12) dependent enzyme glutamate mutase
-
Gruber, K., Reitzer, R. & Kratky, C. Radical shuttling in a protein: ribose pseudorotation controls alkyl-radical transfer in the coenzyme B(12) dependent enzyme glutamate mutase. Angew. Chem. Int. Ed. Engl. 40, 3377-3380 (2001).
-
(2001)
Angew. Chem. Int. Ed. Engl.
, vol.40
, pp. 3377-3380
-
-
Gruber, K.1
Reitzer, R.2
Kratky, C.3
-
27
-
-
37649011175
-
Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC
-
Raschke, M. et al. Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC. Proc. Natl Acad. Sci. USA 104, 19637-19642 (2007).
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 19637-19642
-
-
Raschke, M.1
-
28
-
-
4444372513
-
Characterization of MOCS1A, an oxygen-sensitive iron-sulfur protein involved in human molybdenum cofactor biosynthesis
-
Hanzelmann, P. et al. Characterization of MOCS1A, an oxygen-sensitive iron-sulfur protein involved in human molybdenum cofactor biosynthesis. J. Biol. Chem. 279, 34721-34732 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 34721-34732
-
-
Hanzelmann, P.1
-
29
-
-
84874066127
-
Catalysis of a new ribose carbon-insertion reaction by the molybdenum cofactor biosynthetic enzyme MoaA
-
Mehta, A. P. et al. Catalysis of a new ribose carbon-insertion reaction by the molybdenum cofactor biosynthetic enzyme MoaA. Biochemistry 52, 1134-1136 (2013).
-
(2013)
Biochemistry
, vol.52
, pp. 1134-1136
-
-
Mehta, A.P.1
-
30
-
-
0037047411
-
A third bacterial system for the assembly of iron-sulfur clusters with homologs in archaea and plastids
-
Takahashi, Y. & Tokumoto, U. A third bacterial system for the assembly of iron-sulfur clusters with homologs in archaea and plastids. J. Biol. Chem. 277, 28380-28383 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 28380-28383
-
-
Takahashi, Y.1
Tokumoto, U.2
-
31
-
-
0032557666
-
Assembly of iron-sulfur clusters. Identification of an iscSUA-hscBA-fdx gene cluster from Azotobacter vinelandii
-
Zheng, L., Cash, V. L., Flint, D. H. & Dean, D. R. Assembly of iron-sulfur clusters. Identification of an iscSUA-hscBA-fdx gene cluster from Azotobacter vinelandii. J. Biol. Chem. 273, 13264-13272 (1998).
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 13264-13272
-
-
Zheng, L.1
Cash, V.L.2
Flint, D.H.3
Dean, D.R.4
-
32
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. & Minor, W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326 (1997).
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
33
-
-
80053642374
-
The Phenix software for automated determination of macromolecular structures
-
Adams, P. D. et al. The Phenix software for automated determination of macromolecular structures. Methods 55, 94-106 (2011).
-
(2011)
Methods
, vol.55
, pp. 94-106
-
-
Adams, P.D.1
-
34
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 66, 486-501 (2010).
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
35
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen, V. B. et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D Biol. Crystallogr. 66, 12-21 (2010).
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
-
37
-
-
25144517646
-
Integrated modeling program, applied chemical theory (IMPACT)
-
Banks, J. L. et al. Integrated modeling program, applied chemical theory (IMPACT). J. Comput. Chem. 26, 1752-1780 (2005).
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1752-1780
-
-
Banks, J.L.1
-
38
-
-
4444221565
-
UCSF Chimera-A visualization system for exploratory research and analysis
-
Pettersen, E. F. et al. UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612 (2004).
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
|