-
1
-
-
46249112137
-
Water, mining, and waste: an historical and economic perspective on conflict management in South Africa
-
Adler RA, Claassen M, Godfrey L, Turton AR (2007) Water, mining, and waste: an historical and economic perspective on conflict management in South Africa. Econ Peace Secur J 2:33–44
-
(2007)
Econ Peace Secur J
, vol.2
, pp. 33-44
-
-
Adler, R.A.1
Claassen, M.2
Godfrey, L.3
Turton, A.R.4
-
4
-
-
84872210300
-
Too much bacteria still unculturable
-
Aslam Z, Yasir M, Khaliq A, Matsui K, Chung YR (2010) Too much bacteria still unculturable. Crop Environ 1:59–60
-
(2010)
Crop Environ
, vol.1
, pp. 59-60
-
-
Aslam, Z.1
Yasir, M.2
Khaliq, A.3
Matsui, K.4
Chung, Y.R.5
-
5
-
-
84868382773
-
Long-term Cu exposure selects for Cu-tolerant bacterial communities with altered composition, but unaltered richness
-
COI: 1:CAS:528:DC%2BC38XhsVOnu7vK, PID: 22904046
-
Berg J, Brandt KK, Al-Soud WA, Holm PE, Hansen LH, Sørensen SJ, Nybroe O (2012) Long-term Cu exposure selects for Cu-tolerant bacterial communities with altered composition, but unaltered richness. Appl Environ Microbiol 78:7438–7446
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 7438-7446
-
-
Berg, J.1
Brandt, K.K.2
Al-Soud, W.A.3
Holm, P.E.4
Hansen, L.H.5
Sørensen, S.J.6
Nybroe, O.7
-
6
-
-
84855589634
-
In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes
-
PID: 21947461
-
Bohorquez LC, Delgado-Serrano L, López G, Osorio-Forero C, Klepac-Ceraj V, Kolter R, Junca H, Baena S, Zambrano MM (2012) In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes. Microb Ecol 63:103–115
-
(2012)
Microb Ecol
, vol.63
, pp. 103-115
-
-
Bohorquez, L.C.1
Delgado-Serrano, L.2
López, G.3
Osorio-Forero, C.4
Klepac-Ceraj, V.5
Kolter, R.6
Junca, H.7
Baena, S.8
Zambrano, M.M.9
-
7
-
-
84876187622
-
Improved selection of internal transcribed spacer-specific primers enables quantitative, ultra-high-throughput profiling of fungal communities
-
COI: 1:CAS:528:DC%2BC3sXlvVKlsr0%3D, PID: 23377949
-
Bokulich NA, Mills DA (2013) Improved selection of internal transcribed spacer-specific primers enables quantitative, ultra-high-throughput profiling of fungal communities. Appl Environ Microbiol 79:2519–2526
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 2519-2526
-
-
Bokulich, N.A.1
Mills, D.A.2
-
8
-
-
0033831747
-
Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site
-
COI: 1:CAS:528:DC%2BD3cXmsVajsr0%3D, PID: 10966399
-
Bond PL, Smriga SP, Banfield JF (2000) Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site. Appl Environ Microbiol 66:3842–3849
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 3842-3849
-
-
Bond, P.L.1
Smriga, S.P.2
Banfield, J.F.3
-
9
-
-
76549087358
-
Archaea and bacteria with surprising microdiversity show shifts in dominance over 1,000-year time scales in hydrothermal chimneys
-
COI: 1:CAS:528:DC%2BC3cXhslGgsLo%3D, PID: 20080654
-
Brazelton WJ, Ludwig KA, Sogin ML, Andreishcheva EN, Kelley DS, Shen C-C, Edwards RL, Baross JA (2010) Archaea and bacteria with surprising microdiversity show shifts in dominance over 1,000-year time scales in hydrothermal chimneys. Proc Natl Acad Sci U S A 107:1612–1617
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 1612-1617
-
-
Brazelton, W.J.1
Ludwig, K.A.2
Sogin, M.L.3
Andreishcheva, E.N.4
Kelley, D.S.5
Shen, C.-C.6
Edwards, R.L.7
Baross, J.A.8
-
10
-
-
84863981120
-
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
-
COI: 1:CAS:528:DC%2BC38XhtVOjtL3N, PID: 22402401
-
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, Gormley N, Gilbert JA, Smith G, Knight R (2012) Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J 6:1621–1624
-
(2012)
ISME J
, vol.6
, pp. 1621-1624
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Huntley, J.5
Fierer, N.6
Owens, S.M.7
Betley, J.8
Fraser, L.9
Bauer, M.10
Gormley, N.11
Gilbert, J.A.12
Smith, G.13
Knight, R.14
-
11
-
-
0041924004
-
Growth in sulfidic mineral environments: metal resistance mechanisms in acidophilic micro-organisms
-
COI: 1:CAS:528:DC%2BD3sXmslaqs7g%3D, PID: 12904536
-
Dopson M, Baker-Austin C, Koppineedi PR, Bond PL (2003) Growth in sulfidic mineral environments: metal resistance mechanisms in acidophilic micro-organisms. Microbiology 149:1959–1970
-
(2003)
Microbiology
, vol.149
, pp. 1959-1970
-
-
Dopson, M.1
Baker-Austin, C.2
Koppineedi, P.R.3
Bond, P.L.4
-
12
-
-
19144366548
-
Acid mine drainage biogeochemistry at Iron Mountain, California
-
COI: 1:CAS:528:DC%2BD28Xpt1CmsLs%3D
-
Druschel GK, Baker BJ, Gihring TM, Banfield JF (2004) Acid mine drainage biogeochemistry at Iron Mountain, California. Geochem Trans 5:13–32
-
(2004)
Geochem Trans
, vol.5
, pp. 13-32
-
-
Druschel, G.K.1
Baker, B.J.2
Gihring, T.M.3
Banfield, J.F.4
-
13
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
COI: 1:CAS:528:DC%2BC3MXhtVSiurvL, PID: 21700674
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R (2011) UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27:2194–2200
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
14
-
-
84875500588
-
Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA
-
PID: 23493070
-
Gansauge M-T, Meyer M (2013) Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA. Nat Protoc 8:737–748
-
(2013)
Nat Protoc
, vol.8
, pp. 737-748
-
-
Gansauge, M.-T.1
Meyer, M.2
-
15
-
-
35748965835
-
Prokaryotic community composition and ecology of floating macroscopic filaments from an extreme acidic environment, Rio Tinto (SW, Spain)
-
COI: 1:CAS:528:DC%2BD1cXntlemtQ%3D%3D, PID: 17950555
-
Garcia-Moyano A, Gonzalez-Toril E, Aguilera A, Amils R (2007) Prokaryotic community composition and ecology of floating macroscopic filaments from an extreme acidic environment, Rio Tinto (SW, Spain). Syst Appl Microbiol 30:601–614
-
(2007)
Syst Appl Microbiol
, vol.30
, pp. 601-614
-
-
Garcia-Moyano, A.1
Gonzalez-Toril, E.2
Aguilera, A.3
Amils, R.4
-
16
-
-
0028205668
-
Cultural and phylogenetic analysis of mixed microbial populations found in natural and commercial bioleaching environments
-
COI: 1:CAS:528:DyaK2cXlsFeitLo%3D, PID: 7517131
-
Goebel BM, Stackebrandt E (1994) Cultural and phylogenetic analysis of mixed microbial populations found in natural and commercial bioleaching environments. Appl Environ Microbiol 60:1614–1621
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 1614-1621
-
-
Goebel, B.M.1
Stackebrandt, E.2
-
17
-
-
84910002726
-
16S rDNA pyrosequencing analysis of bacterial community in heavy metals polluted soils
-
PID: 24402360
-
Gołębiewski M, Deja-Sikora E, Cichosz M, Tretyn A, Wróbel B (2014) 16S rDNA pyrosequencing analysis of bacterial community in heavy metals polluted soils. Microb Ecol 67:635–647
-
(2014)
Microb Ecol
, vol.67
, pp. 635-647
-
-
Gołębiewski, M.1
Deja-Sikora, E.2
Cichosz, M.3
Tretyn, A.4
Wróbel, B.5
-
18
-
-
0042029329
-
Microbial ecology of an extreme acidic environment, the Tinto River
-
COI: 1:CAS:528:DC%2BD3sXmsFWrtb8%3D, PID: 12902280
-
Gonzalez-Toril E, Llobet-Brossa E, Casamayor EO, Amann R, Amils R (2003) Microbial ecology of an extreme acidic environment, the Tinto River. Appl Environ Microbiol 69:4853–4865
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 4853-4865
-
-
Gonzalez-Toril, E.1
Llobet-Brossa, E.2
Casamayor, E.O.3
Amann, R.4
Amils, R.5
-
19
-
-
79951810485
-
Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient
-
PID: 20811473
-
Gough HL, Stahl DA (2011) Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient. ISME J 5:543–558
-
(2011)
ISME J
, vol.5
, pp. 543-558
-
-
Gough, H.L.1
Stahl, D.A.2
-
20
-
-
38049165717
-
Microbial diversity of mine water at Zhong Tiaoshan copper mine, China
-
COI: 1:CAS:528:DC%2BD1cXhvVCgsr8%3D, PID: 18072249
-
He Z, Xie X, Xiao S, Li J, Qiu G (2007) Microbial diversity of mine water at Zhong Tiaoshan copper mine, China. J Basic Microbiol 47:485–495
-
(2007)
J Basic Microbiol
, vol.47
, pp. 485-495
-
-
He, Z.1
Xie, X.2
Xiao, S.3
Li, J.4
Qiu, G.5
-
21
-
-
84876135163
-
Molecular insights into environmental microbes
-
COI: 1:CAS:528:DC%2BC3sXntleku7c%3D, PID: 23521337
-
Hennecke H, Kjelleberg S, Brussaard C (2013) Molecular insights into environmental microbes. Fems Microbiol Rev 37:285
-
(2013)
Fems Microbiol Rev
, vol.37
, pp. 285
-
-
Hennecke, H.1
Kjelleberg, S.2
Brussaard, C.3
-
22
-
-
0031662188
-
Impact of culture independent studies on the emerging phylogenetic view of bacterial diversity
-
COI: 1:CAS:528:DyaK1cXmt1Sgu7k%3D, PID: 9733676
-
Hugenholtz P, Goebel BM, Pace NR (1998) Impact of culture independent studies on the emerging phylogenetic view of bacterial diversity. J Bacteriol 180:4765–4774
-
(1998)
J Bacteriol
, vol.180
, pp. 4765-4774
-
-
Hugenholtz, P.1
Goebel, B.M.2
Pace, N.R.3
-
23
-
-
33644966656
-
Resistance determinants of a highly arsenic-resistant strain of Leptospirillum ferriphilum isolated from a commercial biooxidation tank
-
Imarla T, Hector SB, Deane SM, Rawlings DE (2006) Resistance determinants of a highly arsenic-resistant strain of Leptospirillum ferriphilum isolated from a commercial biooxidation tank. Appl Environ Microbiol 72:2247–2253
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2247-2253
-
-
Imarla, T.1
Hector, S.B.2
Deane, S.M.3
Rawlings, D.E.4
-
24
-
-
0141741231
-
The microbiology of acidic mine waters
-
COI: 1:CAS:528:DC%2BD3sXnt1CktLs%3D, PID: 14499932
-
Johnson DB, Hallberg KB (2003) The microbiology of acidic mine waters. Res Microbiol 154:466–473
-
(2003)
Res Microbiol
, vol.154
, pp. 466-473
-
-
Johnson, D.B.1
Hallberg, K.B.2
-
25
-
-
84899792849
-
Microbial diversity of Emalahleni mine water in South Africa and tolerance ability of the predominant organism to vanadium and nickel
-
Kamika I, Momba MNB (2013) Microbial diversity of Emalahleni mine water in South Africa and tolerance ability of the predominant organism to vanadium and nickel. Plos One 9:e86189
-
(2013)
Plos One
, vol.9
, pp. 86189
-
-
Kamika, I.1
Momba, M.N.B.2
-
26
-
-
84876836573
-
Contemporary environmental variation determines microbial diversity patterns in acid mine drainage
-
COI: 1:CAS:528:DC%2BC3sXms1Wit7c%3D, PID: 23178673
-
Kuang J-L, Huang L-N, Chen L-X, Hua Z-S, Li S-J, Hu M, Li J-T, Shu W-S (2013) Contemporary environmental variation determines microbial diversity patterns in acid mine drainage. ISME J 7:1038–1050
-
(2013)
ISME J
, vol.7
, pp. 1038-1050
-
-
Kuang, J.-L.1
Huang, L.-N.2
Chen, L.-X.3
Hua, Z.-S.4
Li, S.-J.5
Hu, M.6
Li, J.-T.7
Shu, W.-S.8
-
27
-
-
83755185513
-
Experimental and analytical tools for studying the human microbiome
-
COI: 1:CAS:528:DC%2BC3MXhs1eitr%2FN
-
Kuczynski J, Lauber CL, Walters WA, Parfrey LW, Clemente JC, Gevers D, Knight R (2012) Experimental and analytical tools for studying the human microbiome. Nat Rev Genet 13:47–58
-
(2012)
Nat Rev Genet
, vol.13
, pp. 47-58
-
-
Kuczynski, J.1
Lauber, C.L.2
Walters, W.A.3
Parfrey, L.W.4
Clemente, J.C.5
Gevers, D.6
Knight, R.7
-
28
-
-
84922530295
-
Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains
-
PID: 25093819
-
Kyrpides NC, Hugenholtz P, Eisen JA, Woyke T, Göker M, Parker CT, Amann R, Beck BJ, Chain PS, Chun J, Colwell RR, Danchin A, Dawyndt P, Dedeurwaerdere T, DeLong EF, Detter JC, De Vos P, Donohue TJ, Dong XZ, Ehrlich DS, Fraser C, Gibbs R, Gilbert J, Gilna P, Glöckner FO, Jansson JK, Keasling JD, Knight R, Labeda D, Lapidus A, Lee JS, Li WJ, Ma J, Markowitz V, Moore ER, Morrison M, Meyer F, Nelson KE, Ohkuma M, Ouzounis CA, Pace N, Parkhill J, Qin N, Rossello-Mora R, Sikorski J, Smith D, Sogin M, Stevens R, Stingl U, Suzuki K, Taylor D, Tiedje JM, Tindall B, Wagner M, Weinstock G, Weissenbach J, White O, Wang J, Zhang L, Zhou YG, Field D, Whitman WB, Garrity GM, Klenk HP (2014) Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. PLoS Biol 12:e1001920
-
(2014)
PLoS Biol
, vol.12
, pp. 1001920
-
-
Kyrpides, N.C.1
Hugenholtz, P.2
Eisen, J.A.3
Woyke, T.4
Göker, M.5
Parker, C.T.6
Amann, R.7
Beck, B.J.8
Chain, P.S.9
Chun, J.10
Colwell, R.R.11
Danchin, A.12
Dawyndt, P.13
Dedeurwaerdere, T.14
DeLong, E.F.15
Detter, J.C.16
De Vos, P.17
Donohue, T.J.18
Dong, X.Z.19
Ehrlich, D.S.20
Fraser, C.21
Gibbs, R.22
Gilbert, J.23
Gilna, P.24
Glöckner, F.O.25
Jansson, J.K.26
Keasling, J.D.27
Knight, R.28
Labeda, D.29
Lapidus, A.30
Lee, J.S.31
Li, W.J.32
Ma, J.33
Markowitz, V.34
Moore, E.R.35
Morrison, M.36
Meyer, F.37
Nelson, K.E.38
Ohkuma, M.39
Ouzounis, C.A.40
Pace, N.41
Parkhill, J.42
Qin, N.43
Rossello-Mora, R.44
Sikorski, J.45
Smith, D.46
Sogin, M.47
Stevens, R.48
Stingl, U.49
Suzuki, K.50
Taylor, D.51
Tiedje, J.M.52
Tindall, B.53
Wagner, M.54
Weinstock, G.55
Weissenbach, J.56
White, O.57
Wang, J.58
Zhang, L.59
Zhou, Y.G.60
Field, D.61
Whitman, W.B.62
Garrity, G.M.63
Klenk, H.P.64
more..
-
29
-
-
0001857117
-
16S/23S rRNA sequencing
-
Stackebrandt E, Goodfellow M, (eds), Wiley, Chichester:
-
Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley, Chichester, pp 115–175
-
(1991)
Nucleic acid techniques in bacterial systematics
, pp. 115-175
-
-
Lane, D.J.1
-
30
-
-
0030661563
-
Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
-
COI: 1:CAS:528:DyaK2sXnt12ntbs%3D, PID: 9361437
-
Liu W-T, Marsh TL, Cheng H, Forney LJ (1997) Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol 63:4516–4522
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4516-4522
-
-
Liu, W.-T.1
Marsh, T.L.2
Cheng, H.3
Forney, L.J.4
-
31
-
-
84920521567
-
Diversity analysis of the bacterial community in tobacco waste extract during reconstituted tobacco process
-
Liu H, He H, Cheng C, Liu J, Shu M, Jiao Y, Tao F, Zhong W (2014a) Diversity analysis of the bacterial community in tobacco waste extract during reconstituted tobacco process. Appl Microbiol Biotechnol. doi:10.1007/s00253-014-5960-8
-
(2014)
Appl Microbiol Biotechnol
-
-
Liu, H.1
He, H.2
Cheng, C.3
Liu, J.4
Shu, M.5
Jiao, Y.6
Tao, F.7
Zhong, W.8
-
32
-
-
84901367805
-
Correlating microbial diversity patterns with geochemistry in an extreme and heterogeneous environment of mine tailings
-
COI: 1:CAS:528:DC%2BC2cXhtlersLjJ, PID: 24727268
-
Liu J, Hua Z-S, Chen L-X, Kuang J-L, Li S-J, Shu W-S, Huang L-N (2014b) Correlating microbial diversity patterns with geochemistry in an extreme and heterogeneous environment of mine tailings. Appl Environ Microbiol 80:3677–3686
-
(2014)
Appl Environ Microbiol
, vol.80
, pp. 3677-3686
-
-
Liu, J.1
Hua, Z.-S.2
Chen, L.-X.3
Kuang, J.-L.4
Li, S.-J.5
Shu, W.-S.6
Huang, L.-N.7
-
33
-
-
84875921666
-
A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of shiga-toxigenic Escherichia coli O104:H4
-
COI: 1:CAS:528:DC%2BC3sXmvV2rtbg%3D, PID: 23571589
-
Loman NJ, Constantinidou C, Christner M, Rohde H, Chan JZ, Quick J, Weir JC, Quince C, Smith GP, Betley JR, Aepfelbacher M, Pallen MJ (2013) A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of shiga-toxigenic Escherichia coli O104:H4. JAMA 309:1502–1510
-
(2013)
JAMA
, vol.309
, pp. 1502-1510
-
-
Loman, N.J.1
Constantinidou, C.2
Christner, M.3
Rohde, H.4
Chan, J.Z.5
Quick, J.6
Weir, J.C.7
Quince, C.8
Smith, G.P.9
Betley, J.R.10
Aepfelbacher, M.11
Pallen, M.J.12
-
34
-
-
84906948999
-
Diversity, abundance, and spatial distribution of riverine microbial communities response to effluents from swine farm versus farmhouse restaurant
-
COI: 1:CAS:528:DC%2BC2cXnsl2nu78%3D, PID: 24818690
-
Lu X-M, Lu P-Z (2014) Diversity, abundance, and spatial distribution of riverine microbial communities response to effluents from swine farm versus farmhouse restaurant. Appl Microbiol Biotechnol 98:7597–7608
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 7597-7608
-
-
Lu, X.-M.1
Lu, P.-Z.2
-
35
-
-
84874357602
-
Sex differences in the gut microbiome drive hormone-dependent regulation of autoimmunity
-
Markle JG, Frank DN, Mortin-Toth S, Robertson CE, Feazel LM, Rolle-Kampczyk U, Von Bergen M, McCoy KD, Macpherson AJ, Danska JS (2013) Sex differences in the gut microbiome drive hormone-dependent regulation of autoimmunity. Science 1(339):1084–1088
-
(2013)
Science
, vol.1
, Issue.339
, pp. 1084-1088
-
-
Markle, J.G.1
Frank, D.N.2
Mortin-Toth, S.3
Robertson, C.E.4
Feazel, L.M.5
Rolle-Kampczyk, U.6
Von Bergen, M.7
McCoy, K.D.8
Macpherson, A.J.9
Danska, J.S.10
-
36
-
-
84876795645
-
Genome-wide transcriptional responses of two metal-tolerant symbiotic Mesorhizobium isolates to zinc and cadmium exposure
-
COI: 1:CAS:528:DC%2BC3sXpslyis70%3D, PID: 23631387
-
Maynaud G, Brunel B, Mornico D, Durot M, Severac D, Dubois E, Navarro E, Cleyet-Marel J-C, Quéré AL (2013) Genome-wide transcriptional responses of two metal-tolerant symbiotic Mesorhizobium isolates to zinc and cadmium exposure. BMC Genomics 14:292
-
(2013)
BMC Genomics
, vol.14
, pp. 292
-
-
Maynaud, G.1
Brunel, B.2
Mornico, D.3
Durot, M.4
Severac, D.5
Dubois, E.6
Navarro, E.7
Cleyet-Marel, J.-C.8
Quéré, A.L.9
-
37
-
-
53549118607
-
The metagenomics RAST server—a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
COI: 1:CAS:528:DC%2BD1cXhtlGjsrbM
-
Meyer F, Paarmann D, D’Souza M, Olson R, Glass EM, Kubal M, Paczian T, Rodriguez A, Stevens R, Wilkie A, Wilkening J, Edwards RA (2008) The metagenomics RAST server—a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinforma 9:386–394
-
(2008)
BMC Bioinforma
, vol.9
, pp. 386-394
-
-
Meyer, F.1
Paarmann, D.2
D’Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
Paczian, T.7
Rodriguez, A.8
Stevens, R.9
Wilkie, A.10
Wilkening, J.11
Edwards, R.A.12
-
38
-
-
79957931387
-
Tracking the prokaryotic diversity in acid mine drainage-contaminated environments: a review of molecular methods
-
COI: 1:CAS:528:DC%2BC3MXntVyqsLo%3D
-
Mohapatra BR, Gould WD, Dinardo O, Koren DW (2011) Tracking the prokaryotic diversity in acid mine drainage-contaminated environments: a review of molecular methods. Miner Eng 24:709–718
-
(2011)
Miner Eng
, vol.24
, pp. 709-718
-
-
Mohapatra, B.R.1
Gould, W.D.2
Dinardo, O.3
Koren, D.W.4
-
39
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
COI: 1:CAS:528:DyaK3sXit1Kktrk%3D, PID: 7683183
-
Muyzer G, De Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695–700
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
40
-
-
79960391848
-
Metals and their compounds in the environment. Part II
-
Anke K, Ihnat M, Stoeppler M, (eds), Wiley-VCH, Weinheim, Germany:
-
Nies DH (2004) Metals and their compounds in the environment. Part II. In: Anke K, Ihnat M, Stoeppler M (eds) The elements: essential and toxic effects on microorganisms. Wiley-VCH, Weinheim, Germany
-
(2004)
The elements: essential and toxic effects on microorganisms
-
-
Nies, D.H.1
-
41
-
-
85049594775
-
Mine water pollution—acid mine decant, effluent and treatment: a consideration of key emerging issues that may impact the state of the environment
-
Krishna CS, (ed), The Icfai University Press, India:
-
Oelofse SHH (2009) Mine water pollution—acid mine decant, effluent and treatment: a consideration of key emerging issues that may impact the state of the environment. In: Krishna CS (ed) Mining: environment and health concerns, 1st edn. The Icfai University Press, India, pp 84–91
-
(2009)
Mining: environment and health concerns
, pp. 84-91
-
-
Oelofse, S.H.H.1
-
43
-
-
69549112742
-
Accurate determination of microbial diversity from 454 pyrosequencing data
-
COI: 1:CAS:528:DC%2BD1MXps1ahtL0%3D, PID: 19668203
-
Quince C, Lanzén A, Curtis TP, Davenport RJ, Hall N, Head IM, Read LF, Sloan WT (2009) Accurate determination of microbial diversity from 454 pyrosequencing data. Nat Methods 6:639–641
-
(2009)
Nat Methods
, vol.6
, pp. 639-641
-
-
Quince, C.1
Lanzén, A.2
Curtis, T.P.3
Davenport, R.J.4
Hall, N.5
Head, I.M.6
Read, L.F.7
Sloan, W.T.8
-
44
-
-
84897953488
-
Bacterial diversity of biofilm samples from deep mines in South Africa
-
Raji AI, Moller C, Litthauer D, van Heerden E, Piater LA (2008) Bacterial diversity of biofilm samples from deep mines in South Africa. Biokemistri 20:53–62
-
(2008)
Biokemistri
, vol.20
, pp. 53-62
-
-
Raji, A.I.1
Moller, C.2
Litthauer, D.3
van Heerden, E.4
Piater, L.A.5
-
46
-
-
84882269831
-
Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology
-
PID: 23857503
-
Reuter S, Ellington MJ, Cartwright EP, Köser CU, Török ME, Gouliouris T, Harris SR, Brown NM, Holden MT, Quail M, Parkhill J, Smith GP, Bentley SD, Peacock SJ (2013) Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology. JAMA Intern Med 173:1397–1404
-
(2013)
JAMA Intern Med
, vol.173
, pp. 1397-1404
-
-
Reuter, S.1
Ellington, M.J.2
Cartwright, E.P.3
Köser, C.U.4
Török, M.E.5
Gouliouris, T.6
Harris, S.R.7
Brown, N.M.8
Holden, M.T.9
Quail, M.10
Parkhill, J.11
Smith, G.P.12
Bentley, S.D.13
Peacock, S.J.14
-
47
-
-
84920253614
-
Microbial community composition and dynamics in high-temperature biogas reactors using industrial bioethanol waste as substrate
-
PID: 25012784
-
Röske I, Sabra W, Nacke H, Daniel R, Zeng A-P, Antranikian G, Sahm K (2014) Microbial community composition and dynamics in high-temperature biogas reactors using industrial bioethanol waste as substrate. Appl Microbiol Biotechnol 98:9095–9106
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 9095-9106
-
-
Röske, I.1
Sabra, W.2
Nacke, H.3
Daniel, R.4
Zeng, A.-P.5
Antranikian, G.6
Sahm, K.7
-
48
-
-
84903633269
-
Illumina-based analysis of endophytic bacterial diversity and space-time dynamics in sugar beet on the north slope of Tianshan mountain
-
COI: 1:CAS:528:DC%2BC2cXmsFalt7s%3D, PID: 24752839
-
Shi Y, Yang H, Zhang T, Sun J, Lou K (2014) Illumina-based analysis of endophytic bacterial diversity and space-time dynamics in sugar beet on the north slope of Tianshan mountain. Appl Microbiol Biotechnol 98:6375–6385
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 6375-6385
-
-
Shi, Y.1
Yang, H.2
Zhang, T.3
Sun, J.4
Lou, K.5
-
49
-
-
84925488586
-
-
Diptera: Calliphoridae). Appl Microbiol Biotechnol
-
Singh B, Crippen TL, Zheng L, Fields AT, Yu Z, Ma Q, Wood TK, Dowd SE, Flores M, Tomberlin JK, Tarone AT (2014) A metagenomic assessment of the bacteria associated with Lucilia sericata and Lucilia cuprina (Diptera: Calliphoridae). Appl Microbiol Biotechnol. doi:10.1007/s00253-014-6115-7
-
(2014)
A metagenomic assessment of the bacteria associated with Lucilia sericata and Lucilia cuprina
-
-
Singh, B.1
Crippen, T.L.2
Zheng, L.3
Fields, A.T.4
Yu, Z.5
Ma, Q.6
Wood, T.K.7
Dowd, S.E.8
Flores, M.9
Tomberlin, J.K.10
Tarone, A.T.11
-
50
-
-
67649258517
-
Cytoplasmic pH measurement and homeostasis in bacteria and archaea
-
PID: 19573695
-
Slonczewski JL, Fujisawa M, Dopson M, Krulwich TA, Robert KP (2009) Cytoplasmic pH measurement and homeostasis in bacteria and archaea. Adv Microb Physiol 55:1–79
-
(2009)
Adv Microb Physiol
, vol.55
, pp. 1-79
-
-
Slonczewski, J.L.1
Fujisawa, M.2
Dopson, M.3
Krulwich, T.A.4
Robert, K.P.5
-
51
-
-
84885852128
-
Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River
-
COI: 1:STN:280:DC%2BC3sfns1CltA%3D%3D, PID: 23924231
-
Staley C, Unno T, Gould TJ, Jarvis B, Phillips J, Cotner JB, Sadowsky MJ (2013) Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River. J Appl Microbiol 115:1147–1158
-
(2013)
J Appl Microbiol
, vol.115
, pp. 1147-1158
-
-
Staley, C.1
Unno, T.2
Gould, T.J.3
Jarvis, B.4
Phillips, J.5
Cotner, J.B.6
Sadowsky, M.J.7
-
52
-
-
84899796658
-
Metal(loid) bioaccessibility dictates microbial community composition in acid sulfate soil horizons and sulfidic drain sediments
-
COI: 1:CAS:528:DC%2BC2cXhtFSrtrnO, PID: 25000450
-
Stroud JL, Low A, Collins RN, Manefield M (2014) Metal(loid) bioaccessibility dictates microbial community composition in acid sulfate soil horizons and sulfidic drain sediments. Environ Sci Technol 48:8514–8521
-
(2014)
Environ Sci Technol
, vol.48
, pp. 8514-8521
-
-
Stroud, J.L.1
Low, A.2
Collins, R.N.3
Manefield, M.4
-
53
-
-
84925534230
-
Enhanced degradation of biphenyl from PCB-contaminated sediments: the impact of extracellular organic matter from Micrococcus luteus
-
Su X, Zhang Q, Hu J, Hashmi MZ, Ding L, Shen C (2014) Enhanced degradation of biphenyl from PCB-contaminated sediments: the impact of extracellular organic matter from Micrococcus luteus. Microbiol Biotechnol. doi:10.1007/s00253-014-6108-6
-
(2014)
Microbiol Biotechnol
-
-
Su, X.1
Zhang, Q.2
Hu, J.3
Hashmi, M.Z.4
Ding, L.5
Shen, C.6
-
54
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
COI: 1:CAS:528:DC%2BD2sXpsleqtrc%3D, PID: 17586664
-
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73:5261–5267
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
55
-
-
84899966961
-
Comparison of bacterial community in aqueous and oil phases of water-flooded petroleum reservoirs using pyrosequencing and clone library approaches
-
COI: 1:CAS:528:DC%2BC2cXotFKqtw%3D%3D, PID: 24413919
-
Wang L-Y, Ke W-J, Sun X-B, Liu J-F, Gu J-D, Mu B-Z (2014) Comparison of bacterial community in aqueous and oil phases of water-flooded petroleum reservoirs using pyrosequencing and clone library approaches. Appl Microbiol Biotechnol 98:4209–4221
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 4209-4221
-
-
Wang, L.-Y.1
Ke, W.-J.2
Sun, X.-B.3
Liu, J.-F.4
Gu, J.-D.5
Mu, B.-Z.6
-
57
-
-
84925467328
-
Biofilm bacterial communities in urban drinking water distribution systems transporting waters with different purification strategies
-
Wu H, Zhang J, Mi Z, Xie S, Chen C, Zhang X (2014) Biofilm bacterial communities in urban drinking water distribution systems transporting waters with different purification strategies. Appl Microbiol Biotechnol. doi:10.1007/s00253-014-6095-7
-
(2014)
Appl Microbiol Biotechnol
-
-
Wu, H.1
Zhang, J.2
Mi, Z.3
Xie, S.4
Chen, C.5
Zhang, X.6
-
58
-
-
84878819687
-
Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16S rDNA 454 pyrosequencing
-
COI: 1:CAS:528:DC%2BC3sXjsFGntbo%3D, PID: 22555912
-
Ye L, Zhang T (2013) Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16S rDNA 454 pyrosequencing. Appl Microbiol Biotechnol 97:2681–2690
-
(2013)
Appl Microbiol Biotechnol
, vol.97
, pp. 2681-2690
-
-
Ye, L.1
Zhang, T.2
-
59
-
-
84925464691
-
Effect of hydraulic retention time (HRT) on the biodegradation of trichloroethylene wastewater and anaerobic bacterial community in the UASB reactor
-
Zhang Y, Wang X, Hu M, Li P (2014) Effect of hydraulic retention time (HRT) on the biodegradation of trichloroethylene wastewater and anaerobic bacterial community in the UASB reactor. Appl Microbiol Biotechnol. doi:10.1007/s00253-014-6096-6
-
(2014)
Appl Microbiol Biotechnol
-
-
Zhang, Y.1
Wang, X.2
Hu, M.3
Li, P.4
-
60
-
-
84919935308
-
Pyrosequencing analysis of bacterial community and assembly in activated sludge samples from different geographic regions in China
-
COI: 1:CAS:528:DC%2BC2cXhtFCqtb7J, PID: 25022664
-
Zhao D, Huang R, Zeng J, Yu Z, Liu P, Cheng S, Wu QL (2014) Pyrosequencing analysis of bacterial community and assembly in activated sludge samples from different geographic regions in China. Appl Microbiol Biotechnol 98:9119–9128
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 9119-9128
-
-
Zhao, D.1
Huang, R.2
Zeng, J.3
Yu, Z.4
Liu, P.5
Cheng, S.6
Wu, Q.L.7
|