메뉴 건너뛰기




Volumn 55, Issue 3, 2015, Pages 529-537

Strategy to discover diverse optimal molecules in the small molecule universe

Author keywords

[No Author keywords available]

Indexed keywords

LIBRARIES; STOCHASTIC SYSTEMS;

EID: 84925441528     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci500749q     Document Type: Article
Times cited : (74)

References (26)
  • 1
    • 84877823346 scopus 로고    scopus 로고
    • Virshup et al.
    • Virshup et al. J. Am. Chem. Soc. 2013, 135, 7296-7303
    • (2013) J. Am. Chem. Soc. , vol.135 , pp. 7296-7303
  • 2
    • 84877823346 scopus 로고    scopus 로고
    • Stochastic Voyages into Uncharted Chemical Space Produce a Representative Library of All Possible Drug-like Compounds
    • Virshup, A. M.; Contreras-Garcia, J.; Wipf, P.; Yang, W.; Beratan, D. N. Stochastic Voyages into Uncharted Chemical Space Produce a Representative Library of All Possible Drug-like Compounds J. Am. Chem. Soc. 2013, 135, 7296-7303
    • (2013) J. Am. Chem. Soc. , vol.135 , pp. 7296-7303
    • Virshup, A.M.1    Contreras-Garcia, J.2    Wipf, P.3    Yang, W.4    Beratan, D.N.5
  • 3
    • 0030039619 scopus 로고    scopus 로고
    • The Art and Practice of Structure-Based Drug Design: A Molecular Modeling Perspective
    • Bohacek, R. S.; McMartin, C.; Guida, W. C. The Art and Practice of Structure-Based Drug Design: A Molecular Modeling Perspective Med. Res. Rev. 1996, 16, 3-50
    • (1996) Med. Res. Rev. , vol.16 , pp. 3-50
    • Bohacek, R.S.1    McMartin, C.2    Guida, W.C.3
  • 6
    • 78649254350 scopus 로고    scopus 로고
    • Grand Challenge Commentary: Accessing New Chemical Space for Undruggable Targets
    • Dandapani, S.; Marcaurelle, L. A. Grand Challenge Commentary: Accessing New Chemical Space for Undruggable Targets Nat. Chem. Biol. 2010, 6, 861-863
    • (2010) Nat. Chem. Biol. , vol.6 , pp. 861-863
    • Dandapani, S.1    Marcaurelle, L.A.2
  • 7
    • 84869987352 scopus 로고    scopus 로고
    • Enumeration of 166 Billion Organic Small Molecules in the Chemical Universe Database GDB-17
    • Ruddigkeit, L.; van Deursen, R.; Blum, L. C.; Reymond, J.-L. Enumeration of 166 Billion Organic Small Molecules in the Chemical Universe Database GDB-17 J. Chem. Inf. Model. 2012, 52, 2864-2875
    • (2012) J. Chem. Inf. Model. , vol.52 , pp. 2864-2875
    • Ruddigkeit, L.1    Van Deursen, R.2    Blum, L.C.3    Reymond, J.-L.4
  • 9
    • 0024803111 scopus 로고
    • The NK Model of Rugged Fitness Landscapes and Its Application to Maturation of the Immune Response
    • Kauffman, S. A.; Weinberger, E. D. The NK Model of Rugged Fitness Landscapes and Its Application to Maturation of the Immune Response J. Theor. Biol. 1989, 141, 211-245
    • (1989) J. Theor. Biol. , vol.141 , pp. 211-245
    • Kauffman, S.A.1    Weinberger, E.D.2
  • 10
    • 0030371056 scopus 로고    scopus 로고
    • Landscapes and Their Correlation Functions
    • Stadler, P. F. Landscapes and Their Correlation Functions J. Math. Chem. 1996, 20, 1-45
    • (1996) J. Math. Chem. , vol.20 , pp. 1-45
    • Stadler, P.F.1
  • 11
    • 0001057103 scopus 로고
    • Autocorrelation of Molecular Structures: Application to SAR Studies
    • Moreau, J. L.; Broto, P. Autocorrelation of Molecular Structures: Application to SAR Studies Nouv. J. Chim 1980, 4, 764
    • (1980) Nouv. J. Chim , vol.4 , pp. 764
    • Moreau, J.L.1    Broto, P.2
  • 12
    • 0030278229 scopus 로고    scopus 로고
    • Locating Biologically Active Compounds in Medium-Sized Heterogeneous Datasets by Topological Autocorrelation Vectors: Dopamine and Benzodiazepine Agonists
    • Bauknecht, H.; Zell, A.; Bayer, H.; Levi, P.; Wagener, M.; Sadowski, J.; Gasteiger, J. Locating Biologically Active Compounds in Medium-Sized Heterogeneous Datasets by Topological Autocorrelation Vectors: Dopamine and Benzodiazepine Agonists J. Chem. Inf. Comput. Sci. 1996, 36, 1205-1213
    • (1996) J. Chem. Inf. Comput. Sci. , vol.36 , pp. 1205-1213
    • Bauknecht, H.1    Zell, A.2    Bayer, H.3    Levi, P.4    Wagener, M.5    Sadowski, J.6    Gasteiger, J.7
  • 13
    • 8544256286 scopus 로고    scopus 로고
    • Impact of Different Software Implementations on the Performance of the Maxmin Method for Diverse Subset Selection
    • Schmuker, M.; Givehchi, A.; Schneider, G. Impact of Different Software Implementations on the Performance of the Maxmin Method for Diverse Subset Selection Mol. Divers. 2004, 8, 421-425
    • (2004) Mol. Divers. , vol.8 , pp. 421-425
    • Schmuker, M.1    Givehchi, A.2    Schneider, G.3
  • 15
    • 67649619336 scopus 로고    scopus 로고
    • 970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13
    • Blum, L. C.; Reymond, J.-L. 970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13 J. Am. Chem. Soc. 2009, 131, 8732-8733
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 8732-8733
    • Blum, L.C.1    Reymond, J.-L.2
  • 17
    • 77951986384 scopus 로고    scopus 로고
    • Conformer Generation with OMEGA: Algorithm and Validation Using High Quality Structures from the Protein Databank and Cambridge Structural Database
    • Hawkins, P. C. D.; Skillman, A. G.; Warren, G. L.; Ellingson, B. A.; Stahl, M. T. Conformer Generation with OMEGA: Algorithm and Validation Using High Quality Structures from the Protein Databank and Cambridge Structural Database J. Chem. Inf. Model. 2010, 50, 572-584
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 572-584
    • Hawkins, P.C.D.1    Skillman, A.G.2    Warren, G.L.3    Ellingson, B.A.4    Stahl, M.T.5
  • 20
    • 0002084307 scopus 로고    scopus 로고
    • Ruggedness and Neutrality - The NKp Family of Fitness Landscapes
    • In; Adami, C. Belew, R. Kitano, H. Taylor, E. Cambridge, MA
    • Barnett, L. Ruggedness and Neutrality-The NKp Family of Fitness Landscapes. In Proceedings of the 6th International Conference on Artificial Life; Adami, C.; Belew, R.; Kitano, H.; Taylor, E., Eds.; Cambridge, MA, 1998; pp 18-27.
    • (1998) Proceedings of the 6th International Conference on Artificial Life , pp. 18-27
    • Barnett, L.1
  • 22
    • 2442459652 scopus 로고    scopus 로고
    • Rozenberg, G. Back, Th. Eiben, A. E. Kok, J. N. Spaink, H. P. Springer: Heidelberg, Berlin
    • Eiben, A. E.; Smith, J. E. Introduction to Evolutionary Computing: With 28 Tables; Rozenberg, G.; Back, Th.; Eiben, A. E.; Kok, J. N.; Spaink, H. P., Eds.; Springer: Heidelberg, Berlin, 2003; pp 59-65.
    • (2003) Introduction to Evolutionary Computing: With 28 Tables , pp. 59-65
    • Eiben, A.E.1    Smith, J.E.2
  • 24
    • 33751136693 scopus 로고
    • Assessing Similarity and Diversity of Combinatorial Libraries by Spatial Autocorrelation Functions and Neural Networks
    • Sadowski, J.; Wagener, M.; Gasteiger, J. Assessing Similarity and Diversity of Combinatorial Libraries by Spatial Autocorrelation Functions and Neural Networks Angew. Chem., Int. Ed. Engl. 1995, 34, 2674-2677
    • (1995) Angew. Chem., Int. Ed. Engl. , vol.34 , pp. 2674-2677
    • Sadowski, J.1    Wagener, M.2    Gasteiger, J.3
  • 25
    • 22144432626 scopus 로고    scopus 로고
    • The de Novo Design of Median Molecules within a Property Range of Interest
    • Brown, N.; McKay, B.; Gasteiger, J. The de Novo Design of Median Molecules within a Property Range of Interest J. Comput.-Aided. Mol. Des. 2004, 18, 761-771
    • (2004) J. Comput.-Aided. Mol. Des. , vol.18 , pp. 761-771
    • Brown, N.1    McKay, B.2    Gasteiger, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.