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Volumn 11, Issue 3, 2014, Pages 254-272

Ten lessons with Carl Woese about RNA and comparative analysis

Author keywords

Carl Woese; Comparative analysis; Covariation analysis; RNA; RNA higher order structure; RNA secondary structure; RNA structure principles

Indexed keywords

RNA; RNA 16S; RNA 23S; TRANSFER RNA; RIBOSOME RNA;

EID: 84925285149     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.28718     Document Type: Review
Times cited : (15)

References (61)
  • 1
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • PMID:368799
    • Brosius J, Palmer ML, Kennedy PJ, Noller HF. Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A 1978; 75:4801-5; PMID:368799; http://dx.doi.org/10.1073/pnas.75.10.4801
    • (1978) Proc Natl Acad Sci U S A , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.F.4
  • 2
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • PMID:7028991
    • Brosius J, Dull TJ, Sleeter DD, Noller HF. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 1981; 148:107-27; PMID:7028991; http://dx.doi.org/10.1016/0022-2836(81)90508-8
    • (1981) J Mol Biol , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 3
    • 13344279384 scopus 로고    scopus 로고
    • Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction
    • PMID:15296519
    • Doshi KJ, Cannone JJ, Cobaugh CW, Gutell RR. Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. BMC Bioinformatics 2004; 5:105; PMID:15296519; http://dx.doi.org/10.1186/1471-2105-5-105
    • (2004) BMC Bioinformatics , vol.5 , pp. 105
    • Doshi, K.J.1    Cannone, J.J.2    Cobaugh, C.W.3    Gutell, R.R.4
  • 4
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • PMID:2468181
    • Zuker M. On finding all suboptimal foldings of an RNA molecule. Science 1989; 244:48-52; PMID:2468181; http://dx.doi.org/10.1126/science.2468181
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1
  • 5
    • 0022292369 scopus 로고
    • Comparative anatomy of 16-S-like ribosomal RNA
    • PMID:3911275
    • Gutell RR, Weiser B, Woese CR, Noller HF. Comparative anatomy of 16-S-like ribosomal RNA. Prog Nucleic Acid Res Mol Biol 1985; 32:155-216; PMID:3911275; http://dx.doi.org/10.1016/S0079-6603(08)60348-7
    • (1985) Prog Nucleic Acid Res Mol Biol , vol.32 , pp. 155-216
    • Gutell, R.R.1    Weiser, B.2    Woese, C.R.3    Noller, H.F.4
  • 6
    • 0036600570 scopus 로고    scopus 로고
    • The accuracy of ribosomal RNA comparative structure models
    • PMID:12127448
    • Gutell RR, Lee JC, Cannone JJ. The accuracy of ribosomal RNA comparative structure models. Curr Opin Struct Biol 2002; 12:301-10; PMID:12127448; http://dx.doi.org/10.1016/S0959-440X(02)00339-1
    • (2002) Curr Opin Struct Biol , vol.12 , pp. 301-310
    • Gutell, R.R.1    Lee, J.C.2    Cannone, J.J.3
  • 8
    • 0001861319 scopus 로고
    • How to fold graciously
    • Debrunner P, Tsibris JCM, E. M, eds. Proceedings of a Meeting held at Allerton House, Monticello, IL. Urbana: University of Illinois Press
    • Levinthal C. How to fold graciously. In: Mossbauer Spectroscopy in Biological Systems. In: Debrunner P, Tsibris JCM, E. M, eds. Proceedings of a Meeting held at Allerton House, Monticello, IL. Urbana: University of Illinois Press, 1969:22-4.
    • (1969) Mossbauer Spectroscopy in Biological Systems , pp. 22-24
    • Levinthal, C.1
  • 9
    • 0000616205 scopus 로고
    • RNA secondary structures and their prediction
    • Zuker M, Sankoff D. RNA secondary structures and their prediction. Bull Math Biol 1984; 46:591-621; http://dx.doi.org/10.1007/BF02459506
    • (1984) Bull Math Biol , vol.46 , pp. 591-621
    • Zuker, M.1    Sankoff, D.2
  • 10
    • 0021012648 scopus 로고
    • Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids
    • PMID:6363901
    • Woese CR, Gutell R, Gupta R, Noller HF. Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. Microbiol Rev 1983; 47:621-69; PMID:6363901
    • (1983) Microbiol Rev , vol.47 , pp. 621-669
    • Woese, C.R.1    Gutell, R.2    Gupta, R.3    Noller, H.F.4
  • 11
    • 0028261409 scopus 로고
    • Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
    • PMID:8177168
    • Gutell RR, Larsen N, Woese CR. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol Rev 1994; 58:10-26; PMID:8177168
    • (1994) Microbiol Rev , vol.58 , pp. 10-26
    • Gutell, R.R.1    Larsen, N.2    Woese, C.R.3
  • 13
    • 0025047647 scopus 로고
    • Architecture of ribosomal RNA: Constraints on the sequence of “tetraloops”
    • PMID:2236056
    • Woese CR, Winker S, Gutell RR. Architecture of ribosomal RNA: constraints on the sequence of “tetraloops”. Proc Natl Acad Sci U S A 1990; 87:8467-71; PMID:2236056; http://dx.doi.org/10.1073/pnas.87.21.8467
    • (1990) Proc Natl Acad Sci U S A , vol.87 , pp. 8467-8471
    • Woese, C.R.1    Winker, S.2    Gutell, R.R.3
  • 16
    • 0029877001 scopus 로고    scopus 로고
    • Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23 S-like) ribosomal RNA
    • PMID:8642592
    • Schnare MN, Damberger SH, Gray MW, Gutell RR. Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23 S-like) ribosomal RNA. J Mol Biol 1996; 256:701-19; PMID:8642592; http://dx.doi.org/10.1006/jmbi.1996.0119
    • (1996) J Mol Biol , vol.256 , pp. 701-719
    • Schnare, M.N.1    Damberger, S.H.2    Gray, M.W.3    Gutell, R.R.4
  • 17
    • 0026050670 scopus 로고
    • A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
    • PMID:11540071
    • Winker S, Woese CR. A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics. Syst Appl Microbiol 1991; 14:305-10; PMID:11540071; http://dx.doi.org/10.1016/S0723-2020(11)80303-6
    • (1991) Syst Appl Microbiol , vol.14 , pp. 305-310
    • Winker, S.1    Woese, C.R.2
  • 18
    • 0023184331 scopus 로고
    • Bacterial evolution
    • PMID:2439888
    • Woese CR. Bacterial evolution. Microbiol Rev 1987; 51:221-71; PMID:2439888
    • (1987) Microbiol Rev , vol.51 , pp. 221-271
    • Woese, C.R.1
  • 19
    • 2942571539 scopus 로고    scopus 로고
    • The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
    • PMID:11869452
    • Cannone JJ, Subramanian S, Schnare MN, Collett JR, D’Souza LM, Du Y, Feng B, Lin N, Madabusi LV, Müller KM, et al. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 2002; 3:2; PMID:11869452; http://dx.doi.org/10.1186/1471-2105-3-2
    • (2002) BMC Bioinformatics , vol.3 , pp. 2
    • Cannone, J.J.1    Subramanian, S.2    Schnare, M.N.3    Collett, J.R.4    D’Souza, L.M.5    Du, Y.6    Feng, B.7    Lin, N.8    Madabusi, L.V.9    Müller, K.M.10
  • 20
    • 0022719007 scopus 로고
    • Higher order structure in ribosomal RNA
    • PMID:3720727
    • Gutell RR, Noller HF, Woese CR. Higher order structure in ribosomal RNA. EMBO J 1986; 5:1111-3; PMID:3720727
    • (1986) EMBO J , vol.5 , pp. 1111-1113
    • Gutell, R.R.1    Noller, H.F.2    Woese, C.R.3
  • 21
    • 0024343769 scopus 로고
    • Additional Watson-Crick interactions suggest a structural core in large subunit ribosomal RNA
    • PMID:2684221
    • Haselman T, Gutell RR, Jurka J, Fox GE. Additional Watson-Crick interactions suggest a structural core in large subunit ribosomal RNA. J Biomol Struct Dyn 1989; 7:181-6; PMID:2684221
    • (1989) J Biomol Struct Dyn , vol.7 , pp. 181-186
    • Haselman, T.1    Gutell, R.R.2    Jurka, J.3    Fox, G.E.4
  • 22
    • 0343007324 scopus 로고
    • Evidence for several higher order structural elements in ribosomal RNA
    • PMID:2654936
    • Woese CR, Gutell RR. Evidence for several higher order structural elements in ribosomal RNA. Proc Natl Acad Sci U S A 1989; 86:3119-22; PMID:2654936; http://dx.doi.org/10.1073/pnas.86.9.3119
    • (1989) Proc Natl Acad Sci U S A , vol.86 , pp. 3119-3122
    • Woese, C.R.1    Gutell, R.R.2
  • 23
    • 0025191217 scopus 로고
    • Higher order structural elements in ribosomal RNAs: Pseudo-knots and the use of noncanonical pairs
    • PMID:2300554
    • Gutell RR, Woese CR. Higher order structural elements in ribosomal RNAs: pseudo-knots and the use of noncanonical pairs. Proc Natl Acad Sci U S A 1990; 87:663-7; PMID:2300554; http://dx.doi.org/10.1073/pnas.87.2.663
    • (1990) Proc Natl Acad Sci U S A , vol.87 , pp. 663-667
    • Gutell, R.R.1    Woese, C.R.2
  • 24
    • 0026466830 scopus 로고
    • Identifying constraints on the higher-order structure of RNA: Continued development and application of comparative sequence analysis methods
    • PMID:1454539
    • Gutell RR, Power A, Hertz GZ, Putz EJ, Stormo GD. Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods. Nucleic Acids Res 1992; 20:5785-95; PMID:1454539; http://dx.doi.org/10.1093/nar/20.21.5785
    • (1992) Nucleic Acids Res , vol.20 , pp. 5785-5795
    • Gutell, R.R.1    Power, A.2    Hertz, G.Z.3    Putz, E.J.4    Stormo, G.D.5
  • 25
    • 84862523226 scopus 로고    scopus 로고
    • Structural constraints identified with covariation analysis in ribosomal RNA
    • PMID:22724009
    • Shang L, Xu W, Ozer S, Gutell RR. Structural constraints identified with covariation analysis in ribosomal RNA. PLoS One 2012; 7:e39383; PMID:22724009; http://dx.doi.org/10.1371/journal.pone.0039383
    • (2012) Plos One , vol.7
    • Shang, L.1    Xu, W.2    Ozer, S.3    Gutell, R.R.4
  • 29
    • 0034637111 scopus 로고    scopus 로고
    • The complete atomic structure of the large ribosomal subunit at 2.4 A resolution
    • PMID:10937989
    • Ban N, Nissen P, Hansen J, Moore PB, Steitz TA. The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. Science 2000; 289:905-20; PMID:10937989; http://dx.doi.org/10.1126/science.289.5481.905
    • (2000) Science , vol.289 , pp. 905-920
    • Ban, N.1    Nissen, P.2    Hansen, J.3    Moore, P.B.4    Steitz, T.A.5
  • 30
    • 0343266576 scopus 로고
    • The simplicity behind the elucidation of complex structure in ribosomal RNA
    • Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds., New York: Plenum Press
    • Gutell RR. The simplicity behind the elucidation of complex structure in ribosomal RNA. In: Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds. The Translational Apparatus: Structure, Fuction, Regulation, Evolution. New York: Plenum Press, 1993.
    • (1993) The Translational Apparatus: Structure, Fuction, Regulation, Evolution
    • Gutell, R.R.1
  • 31
    • 84987978423 scopus 로고    scopus 로고
    • Ribosomal RNA and group I introns
    • Green R, Schroeder R, eds., Austin, TX: R.G. Landes
    • Gutell RR. H. DS. Ribosomal RNA and group I introns. In: Green R, Schroeder R, eds. Molecular Biology Intelligence Unit. Austin, TX: R.G. Landes, 1996:15-33.
    • (1996) Molecular Biology Intelligence Unit , pp. 15-33
    • Gutell, R.1
  • 32
    • 0037258776 scopus 로고    scopus 로고
    • The lonepair triloop: A new motif in RNA structure
    • PMID:12473452
    • Lee JC, Cannone JJ, Gutell RR. The lonepair triloop: a new motif in RNA structure. J Mol Biol 2003; 325:65-83; PMID:12473452; http://dx.doi.org/10.1016/S0022-2836(02)01106-3
    • (2003) J Mol Biol , vol.325 , pp. 65-83
    • Lee, J.C.1    Cannone, J.J.2    Gutell, R.R.3
  • 33
    • 0029382234 scopus 로고
    • G.U base pairing motifs in ribosomal RNA
    • PMID:7493326
    • Gautheret D, Konings D, Gutell RRG. G.U base pairing motifs in ribosomal RNA. RNA 1995; 1:807-14; PMID:7493326
    • (1995) RNA , vol.1 , pp. 807-814
    • Gautheret, D.1    Konings, D.2    Gutell, R.R.G.3
  • 34
    • 0028916219 scopus 로고
    • Identification of base-triples in RNA using comparative sequence analysis
    • PMID:7537339
    • Gautheret D, Damberger SH, Gutell RR. Identification of base-triples in RNA using comparative sequence analysis. J Mol Biol 1995; 248:27-43; PMID:7537339; http://dx.doi.org/10.1006/jmbi.1995.0200
    • (1995) J Mol Biol , vol.248 , pp. 27-43
    • Gautheret, D.1    Damberger, S.H.2    Gutell, R.R.3
  • 35
    • 0019830772 scopus 로고
    • Secondary structure of 16S ribosomal RNA
    • PMID:6163215
    • Noller HF, Woese CR. Secondary structure of 16S ribosomal RNA. Science 1981; 212:403-11; PMID:6163215; http://dx.doi.org/10.1126/science.6163215
    • (1981) Science , vol.212 , pp. 403-411
    • Noller, H.F.1    Woese, C.R.2
  • 36
    • 0027956537 scopus 로고
    • A major family of motifs involving G.A mismatches in ribosomal RNA
    • PMID:8078068
    • Gautheret D, Konings D, Gutell RR. A major family of motifs involving G.A mismatches in ribosomal RNA. J Mol Biol 1994; 242:1-8; PMID:8078068; http://dx.doi.org/10.1006/jmbi.1994.1552
    • (1994) J Mol Biol , vol.242 , pp. 1-8
    • Gautheret, D.1    Konings, D.2    Gutell, R.R.3
  • 37
    • 0035919726 scopus 로고    scopus 로고
    • AA.AG@helix.ends: A:A and A:G basepairs at the ends of 16 S and 23 S rRNA helices
    • PMID:11453684
    • Elgavish T, Cannone JJ, Lee JC, Harvey SC, Gutell RRAAAG. AA.AG@helix.ends: A:A and A:G basepairs at the ends of 16 S and 23 S rRNA helices. J Mol Biol 2001; 310:735-53; PMID:11453684; http://dx.doi.org/10.1006/jmbi.2001.4807
    • (2001) J Mol Biol , vol.310 , pp. 735-753
    • Elgavish, T.1    Cannone, J.J.2    Lee, J.C.3    Harvey, S.C.4    Gutell, R.5
  • 38
    • 0034405491 scopus 로고    scopus 로고
    • A story: Unpaired adenosine bases in ribosomal RNAs
    • PMID:11090278
    • Gutell RR, Cannone JJ, Shang Z, Du Y, Serra MJ. A story: unpaired adenosine bases in ribosomal RNAs. J Mol Biol 2000; 304:335-54; PMID:11090278; http://dx.doi.org/10.1006/jmbi.2000.4172
    • (2000) J Mol Biol , vol.304 , pp. 335-354
    • Gutell, R.R.1    Cannone, J.J.2    Shang, Z.3    Du, Y.4    Serra, M.J.5
  • 39
    • 33745951899 scopus 로고    scopus 로고
    • The UAA/GAN internal loop motif: A new RNA structural element that forms a cross-strand AAA stack and long-range tertiary interactions
    • PMID:16828489
    • Lee JC, Gutell RR, Russell R. The UAA/GAN internal loop motif: a new RNA structural element that forms a cross-strand AAA stack and long-range tertiary interactions. J Mol Biol 2006; 360:978-88; PMID:16828489; http://dx.doi.org/10.1016/j.jmb.2006.05.066
    • (2006) J Mol Biol , vol.360 , pp. 978-988
    • Lee, J.C.1    Gutell, R.R.2    Russell, R.3
  • 40
    • 0001791833 scopus 로고    scopus 로고
    • Comparative sequence analysis and the structure of 16S and 23S rRNA
    • Zimmermann RA, Dahlberg AE, eds., Boca Raton, FL: CRC Press
    • Gutell RR. Comparative sequence analysis and the structure of 16S and 23S rRNA. In: Zimmermann RA, Dahlberg AE, eds. Ribosomal RNA: Structure, Evolution, Processing, and Function in Protein Biosynthesis. Boca Raton, FL: CRC Press, 1996:111-28.
    • (1996) Ribosomal RNA: Structure, Evolution, Processing, and Function in Protein Biosynthesis , pp. 111-128
    • Gutell, R.R.1
  • 41
    • 0017182937 scopus 로고
    • Structural domains of transfer RNA molecules
    • PMID:790568
    • Quigley GJ, Rich A. Structural domains of transfer RNA molecules. Science 1976; 194:796-806; PMID:790568; http://dx.doi.org/10.1126/science.790568
    • (1976) Science , vol.194 , pp. 796-806
    • Quigley, G.J.1    Rich, A.2
  • 42
    • 0034697987 scopus 로고    scopus 로고
    • Predicting U-turns in ribosomal RNA with comparative sequence analysis
    • PMID:10891269
    • Gutell RR, Cannone JJ, Konings D, Gautheret D. Predicting U-turns in ribosomal RNA with comparative sequence analysis. J Mol Biol 2000; 300:791-803; PMID:10891269; http://dx.doi.org/10.1006/jmbi.2000.3900
    • (2000) J Mol Biol , vol.300 , pp. 791-803
    • Gutell, R.R.1    Cannone, J.J.2    Konings, D.3    Gautheret, D.4
  • 43
    • 84987960092 scopus 로고    scopus 로고
    • PhD. Dissertation. The University of Texas at Austin
    • Lee JC PhD. Dissertation. The University of Texas at Austin. 2003.
    • (2003)
    • Lee, J.C.1
  • 45
    • 84861706653 scopus 로고    scopus 로고
    • A comparison of the crystal structures of eukaryotic and bacterial SSU ribosomal RNAs reveals common structural features in the hypervariable regions
    • PMID:22693601
    • Lee JC, Gutell RR. A comparison of the crystal structures of eukaryotic and bacterial SSU ribosomal RNAs reveals common structural features in the hypervariable regions. PLoS One 2012; 7:e38203; PMID:22693601; http://dx.doi.org/10.1371/journal.pone.0038203
    • (2012) Plos One , vol.7
    • Lee, J.C.1    Gutell, R.R.2
  • 46
    • 0035028632 scopus 로고    scopus 로고
    • An extended structural signature for the tRNA anticodon loop
    • PMID:11333014
    • Auffinger P, Westhof E. An extended structural signature for the tRNA anticodon loop. RNA 2001; 7:334-41; PMID:11333014; http://dx.doi.org/10.1017/S1355838201002382
    • (2001) RNA , vol.7 , pp. 334-341
    • Auffinger, P.1    Westhof, E.2
  • 47
    • 0015223081 scopus 로고
    • Tryptophan transfer RNA as the UGA suppressor
    • PMID:4933412
    • Hirsh D. Tryptophan transfer RNA as the UGA suppressor. J Mol Biol 1971; 58:439-58; PMID:4933412; http://dx.doi.org/10.1016/0022-2836(71)90362-7
    • (1971) J Mol Biol , vol.58 , pp. 439-458
    • Hirsh, D.1
  • 48
    • 0015223090 scopus 로고
    • Translation of the UGA triplet in vitro by tryptophan transfer RNA’s
    • PMID:4933413
    • Hirsh D, Gold L. Translation of the UGA triplet in vitro by tryptophan transfer RNA’s. J Mol Biol 1971; 58:459-68; PMID:4933413; http://dx.doi.org/10.1016/0022-2836(71)90363-9
    • (1971) J Mol Biol , vol.58 , pp. 459-468
    • Hirsh, D.1    Gold, L.2
  • 49
    • 18844408328 scopus 로고    scopus 로고
    • An active role for tRNA in decoding beyond codon:Anticodon pairing
    • PMID:15905403
    • Cochella L, Green R. An active role for tRNA in decoding beyond codon:anticodon pairing. Science 2005; 308:1178-80; PMID:15905403; http://dx.doi.org/10.1126/science.1111408
    • (2005) Science , vol.308 , pp. 1178-1180
    • Cochella, L.1    Green, R.2
  • 50
    • 79953780968 scopus 로고    scopus 로고
    • How mutations in tRNA distant from the anticodon affect the fidelity of decoding
    • PMID:21378964
    • Schmeing TM, Voorhees RM, Kelley AC, Ramakrishnan V. How mutations in tRNA distant from the anticodon affect the fidelity of decoding. Nat Struct Mol Biol 2011; 18:432-6; PMID:21378964; http://dx.doi.org/10.1038/nsmb.2003
    • (2011) Nat Struct Mol Biol , vol.18 , pp. 432-436
    • Schmeing, T.M.1    Voorhees, R.M.2    Kelley, A.C.3    Ramakrishnan, V.4
  • 51
    • 79955113244 scopus 로고    scopus 로고
    • Tuning the affinity of aminoacyl-tRNA to elongation factor Tu for optimal decoding
    • PMID:21402928
    • Schrader JM, Chapman SJ, Uhlenbeck OC. Tuning the affinity of aminoacyl-tRNA to elongation factor Tu for optimal decoding. Proc Natl Acad Sci U S A 2011; 108:5215-20; PMID:21402928; http://dx.doi.org/10.1073/pnas.1102128108
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 5215-5220
    • Schrader, J.M.1    Chapman, S.J.2    Uhlenbeck, O.C.3
  • 52
    • 34248993209 scopus 로고    scopus 로고
    • The 51-63 base pair of tRNA confers specificity for binding by EF-Tu
    • PMID:17449728
    • Sanderson LE, Uhlenbeck OC. The 51-63 base pair of tRNA confers specificity for binding by EF-Tu. RNA 2007; 13:835-40; PMID:17449728; http://dx.doi.org/10.1261/rna.485307
    • (2007) RNA , vol.13 , pp. 835-840
    • Sanderson, L.E.1    Uhlenbeck, O.C.2
  • 53
    • 84866740707 scopus 로고    scopus 로고
    • Data Deluge and the Human Microbiome Project
    • Sagoff M. Data Deluge and the Human Microbiome Project. Issues Sci Technol 2012; 28:71-8
    • (2012) Issues Sci Technol , vol.28 , pp. 71-78
    • Sagoff, M.1
  • 54
    • 84858439578 scopus 로고    scopus 로고
    • The human microbiome: At the interface of health and disease
    • PMID:22411464
    • Cho I, Blaser MJ. The human microbiome: at the interface of health and disease. Nat Rev Genet 2012; 13:260-70; PMID:22411464
    • (2012) Nat Rev Genet , vol.13 , pp. 260-270
    • Cho, I.1    Blaser, M.J.2
  • 55
    • 0008048504 scopus 로고
    • Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
    • PMID:2413450
    • Lane DJ, Pace B, Olsen GJ, Stahl DA, Sogin ML, Pace NR. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Natl Acad Sci U S A 1985; 82:6955-9; PMID:2413450; http://dx.doi.org/10.1073/pnas.82.20.6955
    • (1985) Proc Natl Acad Sci U S A , vol.82 , pp. 6955-6959
    • Lane, D.J.1    Pace, B.2    Olsen, G.J.3    Stahl, D.A.4    Sogin, M.L.5    Pace, N.R.6
  • 56
    • 2942526841 scopus 로고    scopus 로고
    • A new biology for a new century
    • PMID:15187180
    • Woese CR. A new biology for a new century. Microbiol Mol Biol Rev 2004; 68:173-86; PMID:15187180; http://dx.doi.org/10.1128/MMBR.68.2.173-186.2004
    • (2004) Microbiol Mol Biol Rev , vol.68 , pp. 173-186
    • Woese, C.R.1
  • 57
    • 38749143827 scopus 로고    scopus 로고
    • Our Biotech Future
    • PMID:17326316
    • Dyson F. Our Biotech Future. New York Rev Books 2007; 54:4-8; PMID:17326316
    • (2007) New York Rev Books , vol.54 , pp. 4-8
    • Dyson, F.1
  • 59
    • 84886460602 scopus 로고    scopus 로고
    • Two accurate sequence, structure, and phylogenetic template-based RNA alignment systems
    • PMID:24565058
    • Shang L, Gardner DP, Xu W, Cannone JJ, Miranker DP, Ozer S, Gutell RR. Two accurate sequence, structure, and phylogenetic template-based RNA alignment systems. BMC Syst Biol 2013; 7(Suppl 4):S13; PMID:24565058; http://dx.doi.org/10.1186/1752-0509-7-S4-S13
    • (2013) BMC Syst Biol , vol.7
    • Shang, L.1    Gardner, D.P.2    Xu, W.3    Cannone, J.J.4    Miranker, D.P.5    Ozer, S.6    Gutell, R.R.7
  • 60
    • 80054749075 scopus 로고    scopus 로고
    • Statistical potentials for hairpin and internal loops improve the accuracy of the predicted RNA structure
    • PMID:21889515
    • Gardner DP, Ren P, Ozer S, Gutell RR. Statistical potentials for hairpin and internal loops improve the accuracy of the predicted RNA structure. J Mol Biol 2011; 413:473-83; PMID:21889515; http://dx.doi.org/10.1016/j.jmb.2011.08.033
    • (2011) J Mol Biol , vol.413 , pp. 473-483
    • Gardner, D.P.1    Ren, P.2    Ozer, S.3    Gutell, R.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.