-
1
-
-
79953306449
-
SIMA: simultaneous multiple alignment of LC/MS peak lists
-
Voss B, Hanselmann M, Renard B, et al. SIMA: simultaneous multiple alignment of LC/MS peak lists. Bioinformatics 2011;27(7):987-93.
-
(2011)
Bioinformatics
, vol.27
, Issue.7
, pp. 987-993
-
-
Voss, B.1
Hanselmann, M.2
Renard, B.3
-
3
-
-
42049094894
-
Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments
-
Wong JW, Sullivan MJ, Cagney G. Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments. Brief Bioinformatics 2008;9(2):156-65.
-
(2008)
Brief Bioinformatics
, vol.9
, Issue.2
, pp. 156-165
-
-
Wong, J.W.1
Sullivan, M.J.2
Cagney, G.3
-
4
-
-
65049087175
-
The correspondence problem for metabonomics datasets
-
Åberg K, Alm E, Tosrgrip R. The correspondence problem for metabonomics datasets. Anal Bioanalyt Chem 2009;394(1):151-62.
-
(2009)
Anal Bioanalyt Chem
, vol.394
, Issue.1
, pp. 151-162
-
-
Åberg, K.1
Alm, E.2
Tosrgrip, R.3
-
5
-
-
33646930668
-
A comparison of three algorithms for chromatograms alignment
-
Van Nederkassel A, Daszykowski M, Eilers P, Heyden Y. A comparison of three algorithms for chromatograms alignment. JChromatogrA 2006;1118(2):199-210.
-
(2006)
JChromatogrA
, vol.1118
, Issue.2
, pp. 199-210
-
-
Van Nederkassel, A.1
Daszykowski, M.2
Eilers, P.3
Heyden, Y.4
-
6
-
-
54349106196
-
Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
-
Lange E, Tautenhahn R, Neumann S, Gröpl C. Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements. BMC Bioinformatics 2008; 9(1):375.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.1
, pp. 375
-
-
Lange, E.1
Tautenhahn, R.2
Neumann, S.3
Gröpl, C.4
-
7
-
-
40549126588
-
Alignment of LC-MS images, with applications to biomarker discovery and protein identification
-
Vandenbogaert M, Li-Thiao-Té S, Kaltenbach H, et al. Alignment of LC-MS images, with applications to biomarker discovery and protein identification. Proteomics 2008;8(4):650-72.
-
(2008)
Proteomics
, vol.8
, Issue.4
, pp. 650-672
-
-
Vandenbogaert, M.1
Li-Thiao-Té, S.2
Kaltenbach, H.3
-
8
-
-
85016502755
-
Getting your peaks in line: a review of alignment methods for NMR spectral data
-
Vu TN, Laukens K. Getting your peaks in line: a review of alignment methods for NMR spectral data. Metabolites 2013;3(2):259-76.
-
(2013)
Metabolites
, vol.3
, Issue.2
, pp. 259-276
-
-
Vu, T.N.1
Laukens, K.2
-
9
-
-
35648980489
-
Assessing bias in experiment design for large scale mass spectrometrybased quantitative proteomics
-
Prakash A, Piening B, Whiteaker J, et al. Assessing bias in experiment design for large scale mass spectrometrybased quantitative proteomics. Mol Cell Proteom 2007;6(10):1741-8.
-
(2007)
Mol Cell Proteom
, vol.6
, Issue.10
, pp. 1741-1748
-
-
Prakash, A.1
Piening, B.2
Whiteaker, J.3
-
10
-
-
84873966991
-
De novo correction of mass measurement error in low resolution tandem MS spectra for shotgun proteomics
-
Egertson J, Eng J, Bereman M, et al. De novo correction of mass measurement error in low resolution tandem MS spectra for shotgun proteomics. JAmSocMassSpectrom 2012;23(12):2075-82.
-
(2012)
JAmSocMassSpectrom
, vol.23
, Issue.12
, pp. 2075-2082
-
-
Egertson, J.1
Eng, J.2
Bereman, M.3
-
11
-
-
11144254100
-
Quantifying reproducibility for differential proteomics: noise analysis for protein liquid chromatography-mass spectrometry of human serum
-
Anderle M, Roy S, Lin H, et al. Quantifying reproducibility for differential proteomics: noise analysis for protein liquid chromatography-mass spectrometry of human serum. Bioinformatics 2004;20(18):3575-82.
-
(2004)
Bioinformatics
, vol.20
, Issue.18
, pp. 3575-3582
-
-
Anderle, M.1
Roy, S.2
Lin, H.3
-
12
-
-
19944419092
-
Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. assessment of platform reproducibility
-
Semmes OJ, Feng Z, Adam BL, et al. Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. assessment of platform reproducibility. Clin Chem 2005;51(1):102-12.
-
(2005)
Clin Chem
, vol.51
, Issue.1
, pp. 102-112
-
-
Semmes, O.J.1
Feng, Z.2
Adam, B.L.3
-
13
-
-
76649139789
-
IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation
-
Tsou CC, Tsai CF, Tsui YH, et al. IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation. Mol Cell Proteom 2010;9(1):131-44.
-
(2010)
Mol Cell Proteom
, vol.9
, Issue.1
, pp. 131-144
-
-
Tsou, C.C.1
Tsai, C.F.2
Tsui, Y.H.3
-
14
-
-
79960913301
-
Probabilistic mixture regression models for alignment of LC-MS data
-
Befekadu GK, Tadesse MG, Tsai T, Ressom HW. Probabilistic mixture regression models for alignment of LC-MS data. ACM/IEEETrans Comput Biol Bioinform 2011;8(5):1417-24.
-
(2011)
ACM/IEEETrans Comput Biol Bioinform
, vol.8
, Issue.5
, pp. 1417-1424
-
-
Befekadu, G.K.1
Tadesse, M.G.2
Tsai, T.3
Ressom, H.W.4
-
15
-
-
82955195935
-
MassUntangler: A novel alignment tool for label-free liquid chromatography-mass spectrometry proteomic data
-
Ballardini R, Benevento M, Arrigoni G, et al. MassUntangler: A novel alignment tool for label-free liquid chromatography-mass spectrometry proteomic data. JChromatogrA 2011;1218(49):8859-68.
-
(2011)
JChromatogrA
, vol.1218
, Issue.49
, pp. 8859-8868
-
-
Ballardini, R.1
Benevento, M.2
Arrigoni, G.3
-
16
-
-
77149136461
-
Current technological challenges in biomarker discovery and validation
-
Horvatovich P, Mischoff R. Current technological challenges in biomarker discovery and validation. Eur J Mass Spectrom 2009;16(1):101.
-
(2009)
Eur J Mass Spectrom
, vol.16
, Issue.1
, pp. 101
-
-
Horvatovich, P.1
Mischoff, R.2
-
17
-
-
1842559788
-
Reproducibility of seldi-tof protein patterns in serum: comparing datasets from different experiments
-
Baggerly KA, Morris JS, Coombes KR. Reproducibility of seldi-tof protein patterns in serum: comparing datasets from different experiments. Bioinformatics 2004;20(5):777-85.
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 777-785
-
-
Baggerly, K.A.1
Morris, J.S.2
Coombes, K.R.3
-
18
-
-
34548671166
-
Chromatographic alignment of LC-MS and LC-MS/MS datasets by genetic algorithm feature extraction
-
Palmblad M, Mills D, Bindschedler L, Cramer R. Chromatographic alignment of LC-MS and LC-MS/MS datasets by genetic algorithm feature extraction. J Am Soc Mass Spectrom 2007;18(10):1835-43.
-
(2007)
J Am Soc Mass Spectrom
, vol.18
, Issue.10
, pp. 1835-1843
-
-
Palmblad, M.1
Mills, D.2
Bindschedler, L.3
Cramer, R.4
-
19
-
-
33846783242
-
AMSRPM: robust point matching for retention time alignment of LC/MS data with R
-
Kirchner M, Saussen B, Steen H, et al. AMSRPM: robust point matching for retention time alignment of LC/MS data with R. J Stat Software, 2007;18:4.
-
(2007)
J Stat Software
, vol.18
, pp. 4
-
-
Kirchner, M.1
Saussen, B.2
Steen, H.3
-
20
-
-
34447515704
-
A new algorithm of piecewise automated beam search for peak alignment of chromatographic fingerprints
-
Yao W, Yin X, Hu Y. A new algorithm of piecewise automated beam search for peak alignment of chromatographic fingerprints. JChromatogrA 2007;1160(1):254-62.
-
(2007)
JChromatogrA
, vol.1160
, Issue.1
, pp. 254-262
-
-
Yao, W.1
Yin, X.2
Hu, Y.3
-
21
-
-
0037024701
-
Chromatographic alignment by warping and dynamic programming as a pre-processing tool for parafac modelling of liquid chromatography-mass spectrometry data
-
Bylund D, Danielsson R, Malmquist G, Markides K. Chromatographic alignment by warping and dynamic programming as a pre-processing tool for parafac modelling of liquid chromatography-mass spectrometry data. JChromatogrA 2002;961(2):237-44.
-
(2002)
JChromatogrA
, vol.961
, Issue.2
, pp. 237-244
-
-
Bylund, D.1
Danielsson, R.2
Malmquist, G.3
Markides, K.4
-
22
-
-
33645468005
-
Signal maps for mass spectrometry-based comparative proteomics
-
Prakash A, Mallick P, Whiteaker J, et al. Signal maps for mass spectrometry-based comparative proteomics. Mol Cell Proteom 2006;5(3):423-32.
-
(2006)
Mol Cell Proteom
, vol.5
, Issue.3
, pp. 423-432
-
-
Prakash, A.1
Mallick, P.2
Whiteaker, J.3
-
23
-
-
33845527323
-
Chromalign: a two-step algorithmic procedure for time alignment of threedimensionalLC-MS chromatographic surfaces
-
Sadygov R, Maroto F, Hühmer A. Chromalign: a two-step algorithmic procedure for time alignment of threedimensionalLC-MS chromatographic surfaces. Anal Chem 2006;78(24):8207-17.
-
(2006)
Anal Chem
, vol.78
, Issue.24
, pp. 8207-8217
-
-
Sadygov, R.1
Maroto, F.2
Hühmer, A.3
-
24
-
-
51949110240
-
Optimized time alignment algorithm for LC- MS data: Correlation optimized warping using component detection algorithmselected mass chromatograms
-
Christin C, Smilde A, Hoefsloot H, et al. Optimized time alignment algorithm for LC- MS data: Correlation optimized warping using component detection algorithmselected mass chromatograms. Anal Chem 2008;80(18):7012-21.
-
(2008)
Anal Chem
, vol.80
, Issue.18
, pp. 7012-7021
-
-
Christin, C.1
Smilde, A.2
Hoefsloot, H.3
-
25
-
-
0032076034
-
Aligning of single and multiple wavelength chromatographic profiles for chemometric data analysis using correlation optimised warping
-
Nielsen N, Carstensen J, Smedsgaard J. Aligning of single and multiple wavelength chromatographic profiles for chemometric data analysis using correlation optimised warping. JChromatogrA 1998;805(1):17-35.
-
(1998)
JChromatogrA
, vol.805
, Issue.1
, pp. 17-35
-
-
Nielsen, N.1
Carstensen, J.2
Smedsgaard, J.3
-
27
-
-
33846651082
-
Difference detection in LC-MS data for protein biomarker discovery
-
Listgarten J, Neal R, Roweis S, et al. Difference detection in LC-MS data for protein biomarker discovery. Bioinformatics 2007;23:e198-204.
-
(2007)
Bioinformatics
, vol.23
, pp. e198-204
-
-
Listgarten, J.1
Neal, R.2
Roweis, S.3
-
28
-
-
33745597361
-
Progressive peak clustering in GC-MS metabolomic experiments applied to leishmania parasites
-
DeSouza DP, Saunders EC, McConville MJ, Likić VA. Progressive peak clustering in GC-MS metabolomic experiments applied to leishmania parasites. Bioinformatics 2006;22(11):1391-6.
-
(2006)
Bioinformatics
, vol.22
, Issue.11
, pp. 1391-1396
-
-
DeSouza, D.P.1
Saunders, E.C.2
McConville, M.J.3
Likić, V.A.4
-
29
-
-
0032045464
-
Synchronization of batch trajectories using dynamic time warping
-
Kassidas A, MacGregor J, Taylor P. Synchronization of batch trajectories using dynamic time warping. Am Inst Chem EngJ 1998;44(4):864-75.
-
(1998)
Am Inst Chem EngJ
, vol.44
, Issue.4
, pp. 864-875
-
-
Kassidas, A.1
MacGregor, J.2
Taylor, P.3
-
30
-
-
33748201234
-
Semi-supervised LC/MS alignment for differential proteomics
-
Fischer B, Grossmann J, Roth V, et al. Semi-supervised LC/MS alignment for differential proteomics. Bioinformatics 2006;22(14):e132-40.
-
(2006)
Bioinformatics
, vol.22
, Issue.14
, pp. e132-e140
-
-
Fischer, B.1
Grossmann, J.2
Roth, V.3
-
31
-
-
23944472666
-
Comprehensive label-free method for the relative quantification of proteins from biological samples
-
Higgs RE, Knierman MD, Gelfanova V, et al. Comprehensive label-free method for the relative quantification of proteins from biological samples. J Proteome Res 2005;4(4):1442-50.
-
(2005)
J Proteome Res
, vol.4
, Issue.4
, pp. 1442-1450
-
-
Higgs, R.E.1
Knierman, M.D.2
Gelfanova, V.3
-
32
-
-
33750743755
-
Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline
-
Jaitly N, Monroe M, Petyuk V, et al. Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline. Anal Chem 2006;78(21):7397-409.
-
(2006)
Anal Chem
, vol.78
, Issue.21
, pp. 7397-7409
-
-
Jaitly, N.1
Monroe, M.2
Petyuk, V.3
-
33
-
-
84873700958
-
MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis
-
LaMarche BL, Crowell KL, Jaitly N, et al. MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis. BMC Bioinformatics 2013;14(1):49.
-
(2013)
BMC Bioinformatics
, vol.14
, Issue.1
, pp. 49
-
-
LaMarche, B.L.1
Crowell, K.L.2
Jaitly, N.3
-
34
-
-
42149105642
-
Time-series alignment by non-negative multiple generalized canonical correlation analysis
-
Fischer B, Roth V, Buhmann J. Time-series alignment by non-negative multiple generalized canonical correlation analysis. BMC Bioinformatics 2007;8(Suppl 10):S4.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. S4
-
-
Fischer, B.1
Roth, V.2
Buhmann, J.3
-
35
-
-
65249132985
-
MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing
-
Lommen A. MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing. Anal Chem 2009;81(8):3079-86.
-
(2009)
Anal Chem
, vol.81
, Issue.8
, pp. 3079-3086
-
-
Lommen, A.1
-
36
-
-
33747180294
-
A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS
-
Bellew M, Coram M, Fitzgibbon M, et al. A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS. Bioinformatics 2006;22(15):1902-9.
-
(2006)
Bioinformatics
, vol.22
, Issue.15
, pp. 1902-1909
-
-
Bellew, M.1
Coram, M.2
Fitzgibbon, M.3
-
37
-
-
34547156610
-
A platform for accurate mass and time analyses of mass spectrometry data
-
May D, Fitzgibbon M, Liu Y, et al. A platform for accurate mass and time analyses of mass spectrometry data. JProteome Res 2007;6(7):2685-94.
-
(2007)
JProteome Res
, vol.6
, Issue.7
, pp. 2685-2694
-
-
May, D.1
Fitzgibbon, M.2
Liu, Y.3
-
38
-
-
77954772536
-
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
-
Pluskal T, Castillo S, Villar-Briones A, Oresic M. MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics 2010;11(1):395.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.1
, pp. 395
-
-
Pluskal, T.1
Castillo, S.2
Villar-Briones, A.3
Oresic, M.4
-
39
-
-
33644867564
-
MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data
-
Katajamaa M, Miettinen J, Orešič M. MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data. Bioinformatics 2006;22(5):634-6.
-
(2006)
Bioinformatics
, vol.22
, Issue.5
, pp. 634-636
-
-
Katajamaa, M.1
Miettinen, J.2
Orešič, M.3
-
40
-
-
33748490271
-
Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping
-
Prince J, Marcotte E. Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping. Anal Chem 2006;78(17):6140-52.
-
(2006)
Anal Chem
, vol.78
, Issue.17
, pp. 6140-6152
-
-
Prince, J.1
Marcotte, E.2
-
41
-
-
34547830862
-
A geometric approach for the alignment of liquid chromatography-mass spectrometry data
-
Lange E, Gröpl C, Schulz-Trieglaff O, et al. A geometric approach for the alignment of liquid chromatography-mass spectrometry data. Bioinformatics 2007;23(13):i273-81.
-
(2007)
Bioinformatics
, vol.23
, Issue.13
, pp. i273-i281
-
-
Lange, E.1
Gröpl, C.2
Schulz-Trieglaff, O.3
-
42
-
-
1042291324
-
Peak alignment using reduced set mapping
-
Torgrip R, Åberg M, Karlberg B, Jacobsson S. Peak alignment using reduced set mapping. J Chemometr 2003;17(11):573-82.
-
(2003)
J Chemometr
, vol.17
, Issue.11
, pp. 573-582
-
-
Torgrip, R.1
Åberg, M.2
Karlberg, B.3
Jacobsson, S.4
-
43
-
-
0038697673
-
High-speed peak matching algorithm for retention time alignment of gas chromatographic data for chemometric analysis
-
Johnson K, Wright B, Jarman K, Synovec R. High-speed peak matching algorithm for retention time alignment of gas chromatographic data for chemometric analysis. JChromatogrA 2003;996(1):141-55.
-
(2003)
JChromatogrA
, vol.996
, Issue.1
, pp. 141-155
-
-
Johnson, K.1
Wright, B.2
Jarman, K.3
Synovec, R.4
-
44
-
-
33750615386
-
PEPPeR, a platform for experimental proteomic pattern recognition
-
Jaffe J, Mani D, Leptos K, et al. PEPPeR, a platform for experimental proteomic pattern recognition. Mol Cell Proteomics 2006;5(10):1927-41.
-
(2006)
Mol Cell Proteomics
, vol.5
, Issue.10
, pp. 1927-1941
-
-
Jaffe, J.1
Mani, D.2
Leptos, K.3
-
45
-
-
34147109800
-
A statistical method for chromatographic alignment of LC-MS data
-
Wang P, Tang H, Fitzgibbon M, et al. A statistical method for chromatographic alignment of LC-MS data. Biostatistics 2007;8(2):357-67.
-
(2007)
Biostatistics
, vol.8
, Issue.2
, pp. 357-367
-
-
Wang, P.1
Tang, H.2
Fitzgibbon, M.3
-
46
-
-
84886028630
-
Multi-profile bayesian alignment model for LC-MS data analysis with integration of internal standards
-
Tsai TH, Tadesse MG, Di Poto C, et al. Multi-profile bayesian alignment model for LC-MS data analysis with integration of internal standards. Bioinformatics 2013;29:2774-80.
-
(2013)
Bioinformatics
, vol.29
, pp. 2774-2780
-
-
Tsai, T.H.1
Tadesse, M.G.2
Di Poto, C.3
-
47
-
-
62549154087
-
Retention time alignment algorithms for lc/ms data must consider nonlinear shifts
-
Podwojski K, Fritsch A, Chamrad D, et al. Retention time alignment algorithms for lc/ms data must consider nonlinear shifts. Bioinformatics 2009;25(6):758-64.
-
(2009)
Bioinformatics
, vol.25
, Issue.6
, pp. 758-764
-
-
Podwojski, K.1
Fritsch, A.2
Chamrad, D.3
-
49
-
-
0347758340
-
Parametric time warping
-
Eilers P. Parametric time warping. Anal Chem 2004;76(2):404-11.
-
(2004)
Anal Chem
, vol.76
, Issue.2
, pp. 404-411
-
-
Eilers, P.1
-
51
-
-
14344250874
-
Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry
-
Radulovic D, Jelveh S, Ryu S, et al. Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry. Mol Cellular Proteomics 2004;3(10):984-97.
-
(2004)
Mol Cellular Proteomics
, vol.3
, Issue.10
, pp. 984-997
-
-
Radulovic, D.1
Jelveh, S.2
Ryu, S.3
-
52
-
-
0142033903
-
Metabolomics spectral formatting, alignment and conversion tools (MSFACTs)
-
Duran AL, Yang J, Wang L, Sumner LW. Metabolomics spectral formatting, alignment and conversion tools (MSFACTs). Bioinformatics 2003;19(17):2283-2293.
-
(2003)
Bioinformatics
, vol.19
, Issue.17
, pp. 2283-2293
-
-
Duran, A.L.1
Yang, J.2
Wang, L.3
Sumner, L.W.4
-
53
-
-
84873117425
-
SAGA: A novel signal alignment method based on genetic algorithm
-
Kaya H, Gündüz-Öğüdücüc S. SAGA: A novel signal alignment method based on genetic algorithm. Inform Sci 2013;228:113-30.
-
(2013)
Inform Sci
, vol.228
, pp. 113-130
-
-
Kaya, H.1
Gündüz-Öğüdücüc, S.2
-
54
-
-
34249321998
-
Automated alignment of chromatographic data
-
Skov T, van den Berg F, Tomasi G, Bro R. Automated alignment of chromatographic data. J Chemom 2010; 20(11-12):484-9.
-
(2010)
J Chemom
, vol.20
, Issue.11-12
, pp. 484-489
-
-
Skov, T.1
van den Berg, F.2
Tomasi, G.3
Bro, R.4
-
55
-
-
26844492976
-
A software suite for the generation and comparison of peptide arrays from sets of data collected by liquid chromatography-mass spectrometry
-
2005
-
jun Li MX, Eugene CY, Kemp CJ, et al. A software suite for the generation and comparison of peptide arrays from sets of data collected by liquid chromatography-mass spectrometry. Mol Cell Proteomics 2005;4(9):1328-1340, 2005.
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.9
, pp. 1328-1340
-
-
Jun Li, M.X.1
Eugene, C.Y.2
Kemp, C.J.3
-
56
-
-
42949157310
-
Two-dimensional method for time aligning liquid chromatography-mass spectrometry data
-
Suits F, Lepre J, Du P, et al. Two-dimensional method for time aligning liquid chromatography-mass spectrometry data. Analytical Chemistry 2008;80(9):3095-104.
-
(2008)
Analytical Chemistry
, vol.80
, Issue.9
, pp. 3095-3104
-
-
Suits, F.1
Lepre, J.2
Du, P.3
-
57
-
-
35348965139
-
SuperHirn-a novel tool for high resolution LC-MS-based peptide/protein profiling
-
Mueller L, Rinner O, Schmidt A, et al. SuperHirn-a novel tool for high resolution LC-MS-based peptide/protein profiling. Proteomics 2007;7(19):3470-80.
-
(2007)
Proteomics
, vol.7
, Issue.19
, pp. 3470-3480
-
-
Mueller, L.1
Rinner, O.2
Schmidt, A.3
-
58
-
-
84865379529
-
New supervised alignment method as a preprocessing tool for chromatographic data in metabolomic studies
-
Struck W, Wiczling P, Waszczuk-Jankowska M, et al. New supervised alignment method as a preprocessing tool for chromatographic data in metabolomic studies. J Chromatogr A 2012;1256:150-9.
-
(2012)
J Chromatogr A
, vol.1256
, pp. 150-159
-
-
Struck, W.1
Wiczling, P.2
Waszczuk-Jankowska, M.3
-
59
-
-
65649108127
-
A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatography
-
Valkenborg D, Thomas G, Krols L, et al. A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatography. JMass Spectrom 2009;44(4):516-29.
-
(2009)
JMass Spectrom
, vol.44
, Issue.4
, pp. 516-529
-
-
Valkenborg, D.1
Thomas, G.2
Krols, L.3
-
60
-
-
19344362619
-
Fuzzy warping of chromatograms
-
Walczak B, Wu W. Fuzzy warping of chromatograms. Chemometr Intell Lab Syst 2005;77(1):173-80.
-
(2005)
Chemometr Intell Lab Syst
, vol.77
, Issue.1
, pp. 173-180
-
-
Walczak, B.1
Wu, W.2
-
61
-
-
10744233766
-
Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards
-
Wang W, Zhou H, Lin H, et al. Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards. Anal Chem 2003;75(18):4818-26.
-
(2003)
Anal Chem
, vol.75
, Issue.18
, pp. 4818-4826
-
-
Wang, W.1
Zhou, H.2
Lin, H.3
-
62
-
-
27744448038
-
Data pre-processing in liquid chromatography-mass spectrometry-based proteomics
-
Zhang X, Asara JM, Adamec J, et al. Data pre-processing in liquid chromatography-mass spectrometry-based proteomics. Bioinformatics 2005;21(21):4054-9.
-
(2005)
Bioinformatics
, vol.21
, Issue.21
, pp. 4054-4059
-
-
Zhang, X.1
Asara, J.M.2
Adamec, J.3
-
63
-
-
32444446805
-
XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
-
Smith C, Elizabeth J, O'Maille G, et al. XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal Chem 2006;78(3):779-87.
-
(2006)
Anal Chem
, vol.78
, Issue.3
, pp. 779-787
-
-
Smith, C.1
Elizabeth, J.2
O'Maille, G.3
-
64
-
-
84861860997
-
Retention time alignment of LC/MS data by a divide-and-conquer algorithm
-
Zhang Z. Retention time alignment of LC/MS data by a divide-and-conquer algorithm. JAmSocMass Spectrom 2012;23(4):764-72.
-
(2012)
JAmSocMass Spectrom
, vol.23
, Issue.4
, pp. 764-772
-
-
Zhang, Z.1
-
65
-
-
2442621332
-
Beam search for peak alignment of NMR signals
-
Lee G, Woodruff D. Beam search for peak alignment of NMR signals. Anal Chimica Acta 2004;513(2):413-16.
-
(2004)
Anal Chimica Acta
, vol.513
, Issue.2
, pp. 413-416
-
-
Lee, G.1
Woodruff, D.2
-
66
-
-
0003165311
-
College admissions and the stability of marriage
-
Gale D, Shapley LS. College admissions and the stability of marriage. Am Math Monthly 1962;69(1):9-15.
-
(1962)
Am Math Monthly
, vol.69
, Issue.1
, pp. 9-15
-
-
Gale, D.1
Shapley, L.S.2
-
68
-
-
84878939124
-
A general model for continuous noninvasive pulmonary artery pressure estimation
-
Smith R, Ventura D. A general model for continuous noninvasive pulmonary artery pressure estimation. Comput Biol Med 2013;43(7):904-13.
-
(2013)
Comput Biol Med
, vol.43
, Issue.7
, pp. 904-913
-
-
Smith, R.1
Ventura, D.2
-
69
-
-
84878882380
-
Novel algorithms and the benefits of comparative validation
-
Smith R, Ventura D, Prince JT. Novel algorithms and the benefits of comparative validation. Bioinformatics 2013;29(12):1583-5.
-
(2013)
Bioinformatics
, vol.29
, Issue.12
, pp. 1583-1585
-
-
Smith, R.1
Ventura, D.2
Prince, J.T.3
-
70
-
-
84890105363
-
Mspire-simulator:LC-MS shotgun proteomic simulator for creating realistic gold standard data
-
in press
-
Noyce AB, Smith R, Dalgliesh J, et al. Mspire-simulator:LC-MS shotgun proteomic simulator for creating realistic gold standard data. J ProteomeRes 2013, in press.
-
(2013)
J ProteomeRes
-
-
Noyce, A.B.1
Smith, R.2
Dalgliesh, J.3
|