Novel algorithms and the benefits of comparative validation

Bioinformatics

Volumn 29, Issue 12, 2013, Pages 1583-1585

  Smith, Robert ^a   Ventura, Dan ^a   Prince, John T ^b  

^a 3361 TMCB   (United States)

^b Brigham Young University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; LETTER; PUBLICATION; REPRODUCIBILITY;

ALGORITHMS; PERIODICALS AS TOPIC; REPRODUCIBILITY OF RESULTS;

EID: 84878882380     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btt176     Document Type: Letter

References (5)

1. Ballardini, R. et al. (2011) MassUntangler: a novel alignment tool for label-free liquid chromatography-mass spectrometry proteomic data. J. Chromatogr. A, 1218, 8859-8868.
2. Christin, C. et al. (2008) Optimized time alignment algorithm for LC-MS data: correlation optimized warping using component detection algorithm-selected mass chromatograms. Anal. Chem., 80, 7012-7021.
3. Christin, C. et al. (2010) Time alignment algorithms based on selected mass traces for complex LC-MS data. J. Proteome Res., 9, 1483-1495.
4. Lange, E. et al. (2008) Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements. BMC Bioinformatics, 9, 375.
5. Van Nederkassel, A. et al. (2006) A comparison of three algorithms for chromatograms alignment. J. Chromatogr. A, 1118, 199-210.