Wolbachia small noncoding RNAs and their role in cross-kingdom communications

Proceedings of the National Academy of Sciences of the United States of America

Volumn 111, Issue 52, 2014, Pages 18721-18726

  Mayoral, Jaime G ^a   Hussain, Mazhar ^a   Albert Joubert, D ^b   Iturbe Ormaetxe, Iñaki ^b   O'Neill, Scott L ^b   Asgari, Sassan ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b MONASH UNIVERSITY   (Australia)

Author keywords

Aedes aegypti; MicroRNA; Mosquito

Indexed keywords

CAPSID PROTEIN; DNA FRAGMENT; GENOMIC DNA; RNA POLYMERASE; SMALL UNTRANSLATED RNA; UNTRANSLATED RNA; BACTERIAL RNA;

ADULT; AEDES AEGYPTI; AEDES ALBOPICTUS; AMPLICON; ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; DOWN REGULATION; DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; ENDOSYMBIONT; ESCHERICHIA COLI; EUKARYOTE; FEMALE; GENE INTERACTION; HOST; HOST CELL; IRON TRANSPORT; MALE; NEUROSPORA CRASSA; NONHUMAN; NORTHERN BLOTTING; NUCLEIC ACID STRUCTURE, METABOLISM AND FUNCTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN SECONDARY STRUCTURE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA TRANSCRIPTION; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; SEQUENCE HOMOLOGY; STOP CODON; TRANSCRIPTION INITIATION SITE; UPREGULATION; WOLBACHIA; AEDES; ANIMAL; GENETICS; METABOLISM; MICROBIOLOGY;

AEDES AEGYPTI; BACTERIA (MICROORGANISMS); DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; HEXAPODA; INVERTEBRATA; PROKARYOTA; WOLBACHIA;

AEDES; ANIMALS; DROSOPHILA MELANOGASTER; RNA, BACTERIAL; RNA, SMALL UNTRANSLATED; WOLBACHIA;

EID: 84924560026     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1420131112     Document Type: Article

References (28)

1. Asgari S (2013) MicroRNA functions in insects. Insect Biochem Mol Biol 43(4):388-397.
2. LaMonte G, et al. (2012) Translocation of sickle cell erythrocyte microRNAs into Plasmodium falciparum inhibits parasite translation and contributes to malaria resistance. Cell Host Microbe 12(2):187-199.
3. Zug R, Hammerstein P (2012) Still a host of hosts for Wolbachia: Analysis of recent data suggests that 40% of terrestrial arthropod species are infected. PLoS ONE 7(6):e38544.
4. Moreira LA, et al. (2009) A Wolbachia symbiont in Aedes aegypti limits infection with dengue, Chikungunya, and Plasmodium. Cell 139(7):1268-1278.
5. Bian G, et al. (2013) Wolbachia invades Anopheles stephensi populations and induces refractoriness to Plasmodium infection. Science 340(6133):748-751.
6. Bourtzis K, et al. (2014) Harnessing mosquito-Wolbachia symbiosis for vector and disease control. Acta Trop 132(Suppl):S150-S163.
7. Hussain M, Frentiu FD, Moreira LA, O'Neill SL, Asgari S (2011) Wolbachia uses host microRNAs to manipulate host gene expression and facilitate colonization of the dengue vector Aedes aegypti. Proc Natl Acad Sci USA 108(22):9250-9255.
8. Hussain M, O'Neill SL, Asgari S (2013) Wolbachia interferes with the intracellular distribution of Argonaute 1 in the dengue vector Aedes aegypti by manipulating the host microRNAs. RNA Biol 10(12):1868-1875.
9. Mayoral JG, Etebari K, Hussain M, Khromykh AA, Asgari S (2014) Wolbachia infection modifies the profile, shuttling and structure of microRNAs in a mosquito cell line. PLoS ONE 9(4):e96107.
10. Zhang G, Hussain M, O'Neill SL, Asgari S (2013) Wolbachia uses a host microRNA to regulate transcripts of a methyltransferase, contributing to dengue virus inhibition in Aedes aegypti. Proc Natl Acad Sci USA 110(25):10276-10281.
11. Caldelari I, Chao Y, Romby P, Vogel J (2013) RNA-mediated regulation in pathogenic bacteria. Cold Spring Harb Perspect Med 3(9):a010298.
12. Shmaryahu A, Carrasco M, Valenzuela PD (2014) Prediction of bacterial microRNAs and possible targets in human cell transcriptome. J Microbiol 52(6):482-489.
13. Furuse Y, et al. (2014) Search for microRNAs expressed by intracellular bacterial pathogens in infected mammalian cells. PLoS ONE 9(9):e106434.
14. Friedländer MR, et al. (2008) Discovering microRNAs from deep sequencing data using miRDeep. Nat Biotechnol 26(4):407-415.
15. Darby AC, et al. (2014) Integrated transcriptomic and proteomic analysis of the global response of Wolbachia to doxycycline-induced stress. ISME J 8(4):925-937.
16. Yang Q, et al. (2013) Transcription of the major neurospora crassa microRNA-like small RNAs relies on RNA polymerase III. PLoS Genet 9(1):e1003227.
17. Taylor L, Meador S, Richeson K (2010) The Terminator: A terminator identification tool. Available at gcat.davidson.edu/Spring2010/terminators/index.html. Accessed December 2, 2014.
18. Naville M, Ghuillot-Gaudeffroy A, Marchais A, Gautheret D (2011) ARNold: A web tool for the prediction of Rho-independent transcription terminators. RNA Biol 8(1):11-13.
19. Dobson SL, et al. (1999) Wolbachia infections are distributed throughout insect somatic and germ line tissues. Insect Biochem Mol Biol 29(2):153-160.
20. Vasudevan S (2012) Posttranscriptional upregulation by microRNAs. Wiley Interdiscip Rev RNA 3(3):311-330.
21. Ferree PM, et al. (2005) Wolbachia utilizes host microtubules and Dynein for anterior localization in the Drosophila oocyte. PLoS Pathog 1(2):e14.
22. Weiberg A, et al. (2013) Fungal small RNAs suppress plant immunity by hijacking host RNA interference pathways. Science 342(6154):118-123.
23. McMeniman CJ, et al. (2009) Stable introduction of a life-shortening Wolbachia infection into the mosquito Aedes aegypti. Science 323(5910):141-144.
24. Frentiu FD, Robinson J, Young PR, McGraw EA, O'Neill SL (2010) Wolbachia-mediated resistance to dengue virus infection and death at the cellular level. PLoS ONE 5(10):e13398.
25. Markham NR, Zuker M (2005) DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res 33(Web Server issue):W577-W581.
26. Hofacker IL (2003) Vienna RNA secondary structure server. Nucleic Acids Res 31(13):3429-3431.
27. Iturbe-Ormaetxe I, Woolfit M, Rancès E, Duplouy A, O'Neill SL (2011) A simple protocol to obtain highly pure Wolbachia endosymbiont DNA for genome sequencing. J Microbiol Methods 84(1):134-136.
28. Solovyev V, Salamov A (2011) Automatic annotation of microbial genomes and metagenomic sequences. Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies, ed Li R (Nova Science Publishers, Hauppauge, NY), pp 61-18.