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Volumn 5, Issue 1, 2015, Pages 637-650

Adsorption of nucleic acid bases, ribose, and phosphate by some clay minerals

Author keywords

5 AMP; Adenine; Adenosine; Adsorption; Clay minerals; Cytosine; Phosphate; Ribose; Uracil

Indexed keywords


EID: 84924336628     PISSN: None     EISSN: 20751729     Source Type: Journal    
DOI: 10.3390/life5010637     Document Type: Review
Times cited : (36)

References (58)
  • 6
    • 77957094067 scopus 로고    scopus 로고
    • Clay minerals and the origin of life
    • Bergaya, F., Theng, B.K.G., Lagaly, G., Eds.; Elsevier: Amsterdam, The Netherlands
    • Brack, A. Clay minerals and the origin of life. In Handbook of Clay Science; Bergaya, F., Theng, B.K.G., Lagaly, G., Eds.; Elsevier: Amsterdam, The Netherlands, 2006; pp. 379-391.
    • (2006) Handbook of Clay Science , pp. 379-391
    • Brack, A.1
  • 7
    • 0011190457 scopus 로고
    • A model for the RNA-catalyzed replication of RNA
    • Cech, T.R. A model for the RNA-catalyzed replication of RNA. Proc. Nat. Acad. Sci. USA 1986, 83, 4360-4363.
    • (1986) Proc. Nat. Acad. Sci. USA , vol.83 , pp. 4360-4363
    • Cech, T.R.1
  • 8
    • 0021332087 scopus 로고
    • Catalytic activity of an RNA molecule prepared by transcription in vitro
    • Guerrier-Takada, C.; Altman, S. Catalytic activity of an RNA molecule prepared by transcription in vitro. Science 1984, 223, 285-286.
    • (1984) Science , vol.223 , pp. 285-286
    • Guerrier-Takada, C.1    Altman, S.2
  • 9
    • 0029876064 scopus 로고    scopus 로고
    • Synthesis of long prebiotic oligomers on mineral surfaces
    • Ferris, J.P.; Hill, A.R., Jr.; Liu, R.; Orgel, L.E. Synthesis of long prebiotic oligomers on mineral surfaces. Nature 1996, 381, 59-61.
    • (1996) Nature , vol.381 , pp. 59-61
    • Ferris, J.P.1    Hill, A.R.2    Liu, R.3    Orgel, L.E.4
  • 10
    • 27744537803 scopus 로고    scopus 로고
    • Mineral catalysis and prebiotic synthesis: Montmorillonite-Catalyzed formation of RNA
    • Ferris, J.P. Mineral catalysis and prebiotic synthesis: Montmorillonite-Catalyzed formation of RNA. Elements 2005, 1, 145-149.
    • (2005) Elements , vol.1 , pp. 145-149
    • Ferris, J.P.1
  • 11
    • 0036669327 scopus 로고    scopus 로고
    • Montmorillonite catalysis of 30-50 mer oligonucleotides: Laboratory demonstration of potential steps in the origin of the RNA world
    • Ferris, J.P. Montmorillonite catalysis of 30-50 mer oligonucleotides: Laboratory demonstration of potential steps in the origin of the RNA world. Orig. Life Evol. Biosph. 2002, 32, 311-332.
    • (2002) Orig. Life Evol. Biosph. , vol.32 , pp. 311-332
    • Ferris, J.P.1
  • 12
    • 0001505003 scopus 로고
    • Adsorption of pyrimidines, purines, and nucleosides by Li-, Na-, Mg-, and Ca-montmorillonite (Clay-organic studies XII)
    • Lailach, G.E.; Thompson, T.D.; Brindley, G.W. Adsorption of pyrimidines, purines, and nucleosides by Li-, Na-, Mg-, and Ca-montmorillonite (Clay-organic studies XII). Clays Clay Miner. 1968, 16, 285-293.
    • (1968) Clays Clay Miner. , vol.16 , pp. 285-293
    • Lailach, G.E.1    Thompson, T.D.2    Brindley, G.W.3
  • 13
    • 1642522896 scopus 로고
    • Absorption of pyrimidines, purines, and nucleosides by Co-, Ni-, Cu-, and Fe(III)- montmorillonite (Clay-organic studies XIII)
    • Lailach, G.E.; Thompson, T.D.; Brindley, G.W. Absorption of pyrimidines, purines, and nucleosides by Co-, Ni-, Cu-, and Fe(III)- montmorillonite (Clay-organic studies XIII). Clays Clay Miner. 1968, 16, 295-301.
    • (1968) Clays Clay Miner. , vol.16 , pp. 295-301
    • Lailach, G.E.1    Thompson, T.D.2    Brindley, G.W.3
  • 14
    • 46149088665 scopus 로고    scopus 로고
    • Adsorption of nucleic acid bases on clays: An investigation using Langmuir and Freundlich isotherms and FT-IR spectroscopy
    • Benetoli, L.O.B.; de Santana, H.; Zaia, C.T.B.V.; Zaia, D.A.M. Adsorption of nucleic acid bases on clays: An investigation using Langmuir and Freundlich isotherms and FT-IR spectroscopy. Monatsh. Chem. 2008, 139, 753-761.
    • (2008) Monatsh. Chem , vol.139 , pp. 753-761
    • Benetoli, L.O.B.1    de Santana, H.2    Zaia, C.T.B.V.3    Zaia, D.A.M.4
  • 15
    • 84888984420 scopus 로고    scopus 로고
    • Measureing the isoelectric point of the edges of clay mineral particles: The case of montmorillonite
    • Pecini, E.M.; Avena, M.J. Measureing the isoelectric point of the edges of clay mineral particles: The case of montmorillonite. Langmuir 2013, 29, 14926-14934.
    • (2013) Langmuir , vol.29 , pp. 14926-14934
    • Pecini, E.M.1    Avena, M.J.2
  • 17
    • 0029311706 scopus 로고
    • Binding of adenine and adenosine-related compounds to the clay montmorillonite and the mineral hydrocyapatite
    • Winter, D.; Zubay, G. Binding of adenine and adenosine-related compounds to the clay montmorillonite and the mineral hydrocyapatite. Orig. Life Envol. Biosph. 1995, 25, 61-81.
    • (1995) Orig. Life Envol. Biosph. , vol.25 , pp. 61-81
    • Winter, D.1    Zubay, G.2
  • 18
    • 78650134166 scopus 로고    scopus 로고
    • Adsorption of adenine, cytosine, uracil, ribose, and phosphate by Mg-exchanged montmorillonite
    • Hashizume, H.; van der Gaast, S.; Theng, B.K.G. Adsorption of adenine, cytosine, uracil, ribose, and phosphate by Mg-exchanged montmorillonite. Clay Miner. 2010, 45, 469-475.
    • (2010) Clay Miner , vol.45 , pp. 469-475
    • Hashizume, H.1    van der Gaast, S.2    Theng, B.K.G.3
  • 20
    • 0022417282 scopus 로고
    • pH profile of the adsorption of nucleotides onto montmorillonite. II. Adsorption and desorption of 5'-AMP in iron-calcium montmorillonite systems
    • Banin, A.; Lawless, J.G.; Church, F.M.; Margulies, L.; Orenberg, J.B. pH profile of the adsorption of nucleotides onto montmorillonite. II. Adsorption and desorption of 5'-AMP in iron-calcium montmorillonite systems. Orig. Life 1985, 15, 89-101.
    • (1985) Orig. Life , vol.15 , pp. 89-101
    • Banin, A.1    Lawless, J.G.2    Church, F.M.3    Margulies, L.4    Orenberg, J.B.5
  • 22
    • 84924291662 scopus 로고    scopus 로고
    • (accessed on 17 December 2014)
    • Pub Chem. Available online: http://our.edu/cccda/sl/solubility/allsolvent (accessed on 17 December 2014).
    • Pub Chem.
  • 23
    • 70350058219 scopus 로고    scopus 로고
    • (accessed on 17 December 2014)
    • Product Information. Available online: http://www.sigmaaldrich.com/ (accessed on 17 December 2014).
    • Product Information.
  • 24
    • 84924328935 scopus 로고    scopus 로고
    • (accessed on 17 December 2014)
    • Lookchem. Available online: http://www.lookchem.com (accessed on 17 December 2014).
    • Lookchem.
  • 25
    • 76949084464 scopus 로고    scopus 로고
    • Solubility of adenosine 5'-monophosphate in different solvents from (288.15 to 330.15)K
    • Wang, D.; Li, Z.-J.; Ying, H.-J. Solubility of adenosine 5'-monophosphate in different solvents from (288.15 to 330.15)K. J. Chem. Eng. Data 2010, 55, 992-993.
    • (2010) J. Chem. Eng. Data , vol.55 , pp. 992-993
    • Wang, D.1    Li, Z.-J.2    Ying, H.-J.3
  • 26
    • 36049005060 scopus 로고
    • Studies in adsorption. XI A system of classification of solution adsorption isotherms and its use in diagnosis of adsorption mechanisms and in measurement of specific surface areas of solids
    • Giles, C.H.; MacEwan, T.H.; Nakhwa, S.N.; Smith, D. Studies in adsorption. XI. A system of classification of solution adsorption isotherms and its use in diagnosis of adsorption mechanisms and in measurement of specific surface areas of solids. J. Chem. Soc. 1960, 3973-3993.
    • (1960) J. Chem. Soc , pp. 3973-3993
    • Giles, C.H.1    McEwan, T.H.2    Nakhwa, S.N.3    Smith, D.4
  • 30
    • 0041473475 scopus 로고    scopus 로고
    • Cations as mediators of the adsorption of nucleic acids on clay surfaces in prebiotic environments
    • Franchi, M.; Ferris, J.P.; Gallori, E. Cations as mediators of the adsorption of nucleic acids on clay surfaces in prebiotic environments. Orig. Life Evol. Biosph. 2003, 33, 1-16.
    • (2003) Orig. Life Evol. Biosph , vol.33 , pp. 1-16
    • Franchi, M.1    Ferris, J.P.2    Gallori, E.3
  • 31
    • 34648837901 scopus 로고    scopus 로고
    • Motmorillonite protection of an UV-irradiated hairpin ribozyme: Evolution of the RNA world in a mineral environment
    • Biondi, E.; Branciamore, S.; Maurel, M.-C.; Gallori, E. Motmorillonite protection of an UV-irradiated hairpin ribozyme: Evolution of the RNA world in a mineral environment. BMC Evol. Biol. 2007, 7, 1-7.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 1-7
    • Biondi, E.1    Branciamore, S.2    Maurel, M.-C.3    Gallori, E.4
  • 32
    • 78651325656 scopus 로고    scopus 로고
    • Radiation chemistry approach to the study of sedimentary microenvironments as models for the protection of bio-organic molecules on the early earth
    • Aguilar-Ovando, E.; Negron-Medoza, A. Radiation chemistry approach to the study of sedimentary microenvironments as models for the protection of bio-organic molecules on the early earth. J. Radiational Nucleic Chem. 2010, 286, 637-642.
    • (2010) J. Radiational Nucleic Chem. , vol.286 , pp. 637-642
    • Aguilar-Ovando, E.1    Negron-Medoza, A.2
  • 34
    • 77951767420 scopus 로고    scopus 로고
    • Influence of montmorillonte on nucleotide oligomerization reactions: A molecular dyamics study
    • Mathew, D.C.; Luthey-Schulten, Z. Influence of montmorillonte on nucleotide oligomerization reactions: A molecular dyamics study. Orig. Life Evol. Biosph. 2010, 40, 303-317.
    • (2010) Orig. Life Evol. Biosph , vol.40 , pp. 303-317
    • Mathew, D.C.1    Luthey-Schulten, Z.2
  • 35
    • 77957311645 scopus 로고    scopus 로고
    • Clay minerals mediate folding and regioselective interactions of RNA: A large-scale atmistic simulation study
    • Swadling, J.B.; Coveney, P.V.; Greenwell, H.C. Clay minerals mediate folding and regioselective interactions of RNA: A large-scale atmistic simulation study. J. Am. Chem. Soc. 2010, 132, 13750-13764.
    • (2010) J. Am. Chem. Soc. , vol.132 , pp. 13750-13764
    • Swadling, J.B.1    Coveney, P.V.2    Greenwell, H.C.3
  • 36
    • 70349392863 scopus 로고    scopus 로고
    • Mechanism of montmroillonite catalysis in the formation of RNA oligomers
    • Joshi, P.C.; Aldersley, M.F.; Delano, J.W.; Ferris, J.P. Mechanism of montmroillonite catalysis in the formation of RNA oligomers. J. Am. Chem. Soc. 2009, 131, 13369-13374.
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 13369-13374
    • Joshi, P.C.1    Aldersley, M.F.2    Delano, J.W.3    Ferris, J.P.4
  • 37
    • 0033811986 scopus 로고    scopus 로고
    • Sequence- and regio-selectivity in the montmorillonite-catalyzed systems of RNA
    • Ertem, G.; Ferris, J.P. Sequence- and regio-selectivity in the montmorillonite-catalyzed systems of RNA. Orig. Life Evol. Biosph. 2000, 30, 411-422.
    • (2000) Orig. Life Evol. Biosph , vol.30 , pp. 411-422
    • Ertem, G.1    Ferris, J.P.2
  • 38
    • 13344270929 scopus 로고    scopus 로고
    • Synthesis of RNA ligomers on heterogenous templates
    • Ertem, G.; Ferris, J.P. Synthesis of RNA ligomers on heterogenous templates. Nature 1996, 379, 238-240.
    • (1996) Nature , vol.379 , pp. 238-240
    • Ertem, G.1    Ferris, J.P.2
  • 39
    • 84924336726 scopus 로고    scopus 로고
    • (accessed on 16 January 2015). (In Japanese)
    • The clay mineral society of Japan. Available online: http://www.cssj2.org/seminar1/section04/ ext.html (accessed on 16 January 2015). (In Japanese).
    • The clay mineral society of Japan.
  • 40
    • 0002916007 scopus 로고
    • Interaction of clay minerals with adenosine-5-phosphates
    • Graf, G.; Lagaly, G. Interaction of clay minerals with adenosine-5-phosphates. Clays Clay Miner. 1980, 20, 12-18.
    • (1980) Clays Clay Miner. , vol.20 , pp. 12-18
    • Graf, G.1    Lagaly, G.2
  • 41
    • 35348856379 scopus 로고    scopus 로고
    • Hydrogen bonding of thymine and uracil with surface of dickite: An ab intio study
    • Robinson, T.L.; Michalkova, A.; Gorb, L.; Leszczynaski, J. Hydrogen bonding of thymine and uracil with surface of dickite: An ab intio study. J. Mol. Struc. 2007, 844-845, 48-58.
    • (2007) J. Mol. Struc. , vol.844-845 , pp. 48-58
    • Robinson, T.L.1    Michalkova, A.2    Gorb, L.3    Leszczynaski, J.4
  • 42
    • 79956006617 scopus 로고    scopus 로고
    • Adsorption of thymine and uracil on 1:1 clay mineral surfaces: Comprehensive ab initio study on influence of sodium cation and water
    • Michalkove, A.; Robinson, T.L.; Leszczynski, J. Adsorption of thymine and uracil on 1:1 clay mineral surfaces: Comprehensive ab initio study on influence of sodium cation and water. Phys. Chem. Chem. Phys. 2011, 13, 7862-7881.
    • (2011) Phys. Chem. Chem. Phys. , vol.13 , pp. 7862-7881
    • Michalkove, A.1    Robinson, T.L.2    Leszczynski, J.3
  • 43
    • 0033393244 scopus 로고    scopus 로고
    • Adsorption of DL-alanine by allophane: Effect of pH and unit particle aggregation
    • Hashizume, H.; Theng, B.K.G. Adsorption of DL-alanine by allophane: Effect of pH and unit particle aggregation. Clay Miner. 1999, 34, 233-238.
    • (1999) Clay Miner , vol.34 , pp. 233-238
    • Hashizume, H.1    Theng, B.K.G.2
  • 44
    • 38549109763 scopus 로고    scopus 로고
    • Adenine, adenosine, ribose and 5'-AMP adsorption to allophane
    • Hashizume, H.; Theng, B.K.G. Adenine, adenosine, ribose and 5'-AMP adsorption to allophane. Clays Clay Miner. 2007, 55, 599-605.
    • (2007) Clays Clay Miner , vol.55 , pp. 599-605
    • Hashizume, H.1    Theng, B.K.G.2
  • 46
    • 0011841851 scopus 로고
    • Mechanism of phosphate adsorption by allophane clays
    • Rajan, S.S.S. Mechanism of phosphate adsorption by allophane clays. N. Zeal. J. Sci. 1975, 18, 93-101.
    • (1975) N. Zeal. J. Sci , vol.18 , pp. 93-101
    • Rajan, S.S.S.1
  • 48
    • 0042575203 scopus 로고    scopus 로고
    • Sugar-anionic clay composite materials: Interaction of pentoses in layered double hydroxide
    • Aisawa, S.; Hirahara, H.; Ishiyama, K.; Ogasawara, W.; Umetsu, Y.; Narita, E. Sugar-anionic clay composite materials: Interaction of pentoses in layered double hydroxide. J. Solid State Chem. 2003, 174, 342-348.
    • (2003) J. Solid State Chem. , vol.174 , pp. 342-348
    • Aisawa, S.1    Hirahara, H.2    Ishiyama, K.3    Ogasawara, W.4    Umetsu, Y.5    Narita, E.6
  • 50
    • 84858276729 scopus 로고    scopus 로고
    • Stability of free and minerals-protected nucleic acids: Implications for the RNA world
    • Swadling, J.B.; Coveney, P.V.; Christopher Greenwell, H. Stability of free and minerals-protected nucleic acids: Implications for the RNA world. Geochim. Cosmochim. Acta 2013, 83, 360-378.
    • (2013) Geochim. Cosmochim. Acta , vol.83 , pp. 360-378
    • Swadling, J.B.1    Coveney, P.V.2    Christopher Greenwell, H.3
  • 51
    • 77953017231 scopus 로고    scopus 로고
    • Role of clays in the prebiotic synthesis of sugar derivatives from formamide
    • Saladino, R.; Neri, V.; Crestini, C. Role of clays in the prebiotic synthesis of sugar derivatives from formamide. Philos. Mag. 2010, 90, 2329-2337.
    • (2010) Philos. Mag. , vol.90 , pp. 2329-2337
    • Saladino, R.1    Neri, V.2    Crestini, C.3
  • 54
    • 37049243502 scopus 로고
    • A production of amino acids under possible primitive Earth conditions
    • Miller, S.L. A production of amino acids under possible primitive Earth conditions. Science 1953, 117, 528-529.
    • (1953) Science , vol.117 , pp. 528-529
    • Miller, S.L.1
  • 55
    • 33748637711 scopus 로고
    • Organic compound synthesis on the primitive Earth
    • Miller, S.L.; Urey, H.C. Organic compound synthesis on the primitive Earth. Science 1959, 130, 245-251.
    • (1959) Science , vol.130 , pp. 245-251
    • Miller, S.L.1    Urey, H.C.2
  • 57
    • 66149108671 scopus 로고    scopus 로고
    • Syhthesis of activated pyrimidine ribonucleotides in prebiotically plausible coditions
    • Powner, M.W.; Gerland, B.; Stherland, J.D. Syhthesis of activated pyrimidine ribonucleotides in prebiotically plausible coditions. Nature 2009, 459, 239-242.
    • (2009) Nature , vol.459 , pp. 239-242
    • Powner, M.W.1    Gerland, B.2    Stherland, J.D.3
  • 58
    • 0024839355 scopus 로고
    • Mineral catalysis of the formation of dimmers of 5'-AMP in aqueous soltion: The possible role of montmorillonite clays I the prebiotic synthesis of RNA
    • Ferris, J.P.; Erten, G.; Agarwel, V. Mineral catalysis of the formation of dimmers of 5'-AMP in aqueous soltion: The possible role of montmorillonite clays I the prebiotic synthesis of RNA. Orig. Life Evol. Biosph. 1989, 19, 165-178.
    • (1989) Orig. Life Evol. Biosph , vol.19 , pp. 165-178
    • Ferris, J.P.1    Erten, G.2    Agarwel, V.3


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