-
1
-
-
0037144546
-
A microRNA in a multiple-turnover RNAi enzyme complex
-
Hutvágner G, Zamore PD (2002) A microRNA in a multiple-turnover RNAi enzyme complex. Science 297(5589):2056-2060.
-
(2002)
Science
, vol.297
, Issue.5589
, pp. 2056-2060
-
-
Hutvágner, G.1
Zamore, P.D.2
-
2
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel DP (2009) MicroRNAs: Target recognition and regulatory functions. Cell 136(2): 215-233.
-
(2009)
Cell
, vol.136
, Issue.2
, pp. 215-233
-
-
Bartel, D.P.1
-
3
-
-
80054689794
-
An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma
-
Sumazin P, et al. (2011) An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma. Cell 147(2): 370-381.
-
(2011)
Cell
, vol.147
, Issue.2
, pp. 370-381
-
-
Sumazin, P.1
-
4
-
-
80054681545
-
In vivo identification of tumor-suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma
-
Karreth FA, et al. (2011) In vivo identification of tumor-suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma. Cell 147(2):382-395.
-
(2011)
Cell
, vol.147
, Issue.2
, pp. 382-395
-
-
Karreth, F.A.1
-
5
-
-
80054715378
-
A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
-
Cesana M, et al. (2011) A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA. Cell 147(2):358-369.
-
(2011)
Cell
, vol.147
, Issue.2
, pp. 358-369
-
-
Cesana, M.1
-
6
-
-
84875372911
-
Natural RNA circles function as efficient microRNA sponges
-
Hansen TB, et al. (2013) Natural RNA circles function as efficient microRNA sponges. Nature 495(7441):384-388.
-
(2013)
Nature
, vol.495
, Issue.7441
, pp. 384-388
-
-
Hansen, T.B.1
-
7
-
-
84892573723
-
The multilayered complexity of ceRNA crosstalk and competition
-
Tay Y, Rinn J, Pandolfi PP (2014) The multilayered complexity of ceRNA crosstalk and competition. Nature 505(7483):344-352.
-
(2014)
Nature
, vol.505
, Issue.7483
, pp. 344-352
-
-
Tay, Y.1
Rinn, J.2
Pandolfi, P.P.3
-
8
-
-
84876899530
-
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments
-
Ala U, et al. (2013) Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments. Proc Natl Acad Sci USA 110(18):7154-7159.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, Issue.18
, pp. 7154-7159
-
-
Ala, U.1
-
9
-
-
84879486402
-
Modelling competing endogenous RNA networks
-
Bosia C, Pagnani A, Zecchina R (2013) Modelling competing endogenous RNA networks. PLoS ONE 8(6):e66609.
-
(2013)
PLoS ONE
, vol.8
, Issue.6
, pp. e66609
-
-
Bosia, C.1
Pagnani, A.2
Zecchina, R.3
-
10
-
-
84874833554
-
MicroRNAs as a selective channel of communication between competing RNAs: A steady-state theory
-
Figliuzzi M, Marinari E, De Martino A (2013) MicroRNAs as a selective channel of communication between competing RNAs: A steady-state theory. Biophys J 104(5): 1203-1213.
-
(2013)
Biophys J
, vol.104
, Issue.5
, pp. 1203-1213
-
-
Figliuzzi, M.1
Marinari, E.2
De Martino, A.3
-
11
-
-
84924285768
-
RNAi Synthetic Logic Circuits for Sensing, Information Processing, and Actuation
-
Meyers RA Wiley, Hoboken, NJ
-
Xie Z, Wroblewska L, Weiss R (2014) RNAi synthetic logic circuits for sensing, information processing, and actuation. Encyclopedia of Molecular Cell Biology and Molecular Medicine, ed Meyers RA (Wiley, Hoboken, NJ), pp 1-23.
-
(2014)
Encyclopedia of Molecular Cell Biology and Molecular Medicine
, pp. 1-23
-
-
Xie, Z.1
Wroblewska, L.2
Weiss, R.3
-
12
-
-
84885131782
-
MiRNAs confer phenotypic robustness to gene networks by suppressing biological noise
-
Siciliano V, et al. (2013) MiRNAs confer phenotypic robustness to gene networks by suppressing biological noise. Nat Commun 4:2364.
-
(2013)
Nat Commun
, vol.4
, pp. 2364
-
-
Siciliano, V.1
-
13
-
-
80051486871
-
Synthetic incoherent feedforward circuits show adaptation to the amount of their genetic template
-
Bleris L, et al. (2011) Synthetic incoherent feedforward circuits show adaptation to the amount of their genetic template. Mol Syst Biol 7:519.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 519
-
-
Bleris, L.1
-
14
-
-
80052456127
-
Multi-input RNAi-based logic circuit for identification of specific cancer cells
-
Xie Z, Wroblewska L, Prochazka L, Weiss R, Benenson Y (2011) Multi-input RNAi-based logic circuit for identification of specific cancer cells. Science 333(6047):1307-1311.
-
(2011)
Science
, vol.333
, Issue.6047
, pp. 1307-1311
-
-
Xie, Z.1
Wroblewska, L.2
Prochazka, L.3
Weiss, R.4
Benenson, Y.5
-
15
-
-
80052266532
-
MicroRNAs can generate thresholds in target gene expression
-
Mukherji S, et al. (2011) MicroRNAs can generate thresholds in target gene expression. Nat Genet 43(9):854-859.
-
(2011)
Nat Genet
, vol.43
, Issue.9
, pp. 854-859
-
-
Mukherji, S.1
-
16
-
-
34548668642
-
Quantitative characteristics of gene regulation by small RNA
-
Levine E, Zhang Z, Kuhlman T, Hwa T (2007) Quantitative characteristics of gene regulation by small RNA. PLoS Biol 5(9):e229.
-
(2007)
PLoS Biol
, vol.5
, Issue.9
, pp. e229
-
-
Levine, E.1
Zhang, Z.2
Kuhlman, T.3
Hwa, T.4
-
17
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
Landgraf P, et al. (2007) A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 129(7):1401-1414.
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1401-1414
-
-
Landgraf, P.1
-
18
-
-
84878695952
-
Transcripts for combined synthetic microRNA and gene delivery
-
Kashyap N, Pham B, Xie Z, Bleris L (2013) Transcripts for combined synthetic microRNA and gene delivery. Mol Biosyst 9(7):1919-1925.
-
(2013)
Mol Biosyst
, vol.9
, Issue.7
, pp. 1919-1925
-
-
Kashyap, N.1
Pham, B.2
Xie, Z.3
Bleris, L.4
-
19
-
-
55949114921
-
MicroRNA-21 down-regulates the expression of tumor suppressor PDCD4 in human glioblastoma cell T98G
-
Chen Y, et al. (2008) MicroRNA-21 down-regulates the expression of tumor suppressor PDCD4 in human glioblastoma cell T98G. Cancer Lett 272(2):197-205.
-
(2008)
Cancer Lett
, vol.272
, Issue.2
, pp. 197-205
-
-
Chen, Y.1
-
20
-
-
33747849920
-
RNAhybrid: MicroRNA target prediction easy, fast and flexible
-
web server issue
-
Kruger J, RehmsmeierM (2006) RNAhybrid: microRNA target prediction easy, fast and flexible. Nucleic Acids Res 34(web server issue):W451-W454.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W451-W454
-
-
Kruger, J.1
Rehmsmeier, M.2
-
21
-
-
84901838697
-
Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance
-
Denzler R, Agarwal V, Stefano J, Bartel DP, Stoffel M (2014) Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance. Mol Cell 54(5):766-776.
-
(2014)
Mol Cell
, vol.54
, Issue.5
, pp. 766-776
-
-
Denzler, R.1
Agarwal, V.2
Stefano, J.3
Bartel, D.P.4
Stoffel, M.5
-
22
-
-
84870038812
-
Argonaute divides its RNA guide into domains with distinct functions and RNA-binding properties
-
Wee LM, Flores-Jasso CF, Salomon WE, Zamore PD (2012) Argonaute divides its RNA guide into domains with distinct functions and RNA-binding properties. Cell 151(5): 1055-1067.
-
(2012)
Cell
, vol.151
, Issue.5
, pp. 1055-1067
-
-
Wee, L.M.1
Flores-Jasso, C.F.2
Salomon, W.E.3
Zamore, P.D.4
-
23
-
-
74049124186
-
Recognizing and avoiding siRNA off-target effects for target identification and therapeutic application
-
Jackson AL, Linsley PS (2010) Recognizing and avoiding siRNA off-target effects for target identification and therapeutic application. Nat Rev Drug Discov 9(1): 57-67.
-
(2010)
Nat Rev Drug Discov
, vol.9
, Issue.1
, pp. 57-67
-
-
Jackson, A.L.1
Linsley, P.S.2
-
24
-
-
77951474125
-
Target mRNA abundance dilutes microRNA and siRNA activity
-
Arvey A, Larsson E, Sander C, Leslie CS, Marks DS (2010) Target mRNA abundance dilutes microRNA and siRNA activity. Mol Syst Biol 6:363.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 363
-
-
Arvey, A.1
Larsson, E.2
Sander, C.3
Leslie, C.S.4
Marks, D.S.5
-
25
-
-
58749086586
-
Thermodynamic stability and Watson-Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect
-
Ui-Tei K, Naito Y, Nishi K, Juni A, Saigo K (2008) Thermodynamic stability and Watson-Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect. Nucleic Acids Res 36(22):7100-7109.
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.22
, pp. 7100-7109
-
-
Ui-Tei, K.1
Naito, Y.2
Nishi, K.3
Juni, A.4
Saigo, K.5
-
26
-
-
80455154984
-
Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs
-
Garcia DM, et al. (2011) Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs. Nat Struct Mol Biol 18(10):1139-1146.
-
(2011)
Nat Struct Mol Biol
, vol.18
, Issue.10
, pp. 1139-1146
-
-
Garcia, D.M.1
-
27
-
-
84924330592
-
Competition between target sites of regulators shapes post-transcriptional gene regulation
-
Jens M, Rajewsky N (2015) Competition between target sites of regulators shapes post-transcriptional gene regulation. Nat Rev Genet 16(2):113-126.
-
(2015)
Nat Rev Genet
, vol.16
, Issue.2
, pp. 113-126
-
-
Jens, M.1
Rajewsky, N.2
-
28
-
-
84880770383
-
Diversifying microRNA sequence and function
-
Ameres SL, Zamore PD (2013) Diversifying microRNA sequence and function. Nat Rev Mol Cell Biol 14(8):475-488.
-
(2013)
Nat Rev Mol Cell Biol
, vol.14
, Issue.8
, pp. 475-488
-
-
Ameres, S.L.1
Zamore, P.D.2
-
29
-
-
67349123973
-
Redefining microRNA targets
-
Seitz H (2009) Redefining microRNA targets. Curr Biol 19(10):870-873.
-
(2009)
Curr Biol
, vol.19
, Issue.10
, pp. 870-873
-
-
Seitz, H.1
-
30
-
-
79952364512
-
Kinetic analysis reveals the fate of a microRNA following target regulation in mammalian cells
-
Baccarini A, et al. (2011) Kinetic analysis reveals the fate of a microRNA following target regulation in mammalian cells. Curr Biol 21(5):369-376.
-
(2011)
Curr Biol
, vol.21
, Issue.5
, pp. 369-376
-
-
Baccarini, A.1
-
31
-
-
3042602447
-
Kinetic analysis of the RNAi enzyme complex
-
Haley B, Zamore PD (2004) Kinetic analysis of the RNAi enzyme complex. Nat Struct Mol Biol 11(7):599-606.
-
(2004)
Nat Struct Mol Biol
, vol.11
, Issue.7
, pp. 599-606
-
-
Haley, B.1
Zamore, P.D.2
|