-
1
-
-
80052121849
-
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing
-
Angiuoli SV, Matalka M, Gussman A, Galens K, Vangala M, Riley DR et al. (2011). CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing. BMC Bioinformatics 12: 356.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 356
-
-
Angiuoli, S.V.1
Matalka, M.2
Gussman, A.3
Galens, K.4
Vangala, M.5
Riley, D.R.6
-
2
-
-
84880658726
-
The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria
-
Bayer T, Neave MJ, Alsheikh-Hussain A, Aranda M, Yum LK, Mincer T et al. (2013). The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria. Appl Environ Microbiol 79: 4759-4762.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 4759-4762
-
-
Bayer, T.1
Neave, M.J.2
Alsheikh-Hussain, A.3
Aranda, M.4
Yum, L.K.5
Mincer, T.6
-
3
-
-
84861340113
-
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella
-
Behrendt L, Larkum AW, Trampe E, Norman A, Sorensen SJ, Kuhl M. (2012). Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella. ISME J 6: 1222-1237.
-
(2012)
ISME J
, vol.6
, pp. 1222-1237
-
-
Behrendt, L.1
Larkum, A.W.2
Trampe, E.3
Norman, A.4
Sorensen, S.J.5
Kuhl, M.6
-
4
-
-
0028135607
-
Bistramides A, B, C, D, and K: A new class of bioactive cyclic polyethers from Lissoclinum bistratum
-
Biard JF, Roussakis C, Kornprobst JM, Gouiffes-Barbin D, Verbist JF, Cotelle P et al. (1994). Bistramides A, B, C, D, and K: a new class of bioactive cyclic polyethers from Lissoclinum bistratum. J Nat Prod 57: 1336-1345.
-
(1994)
J Nat Prod
, vol.57
, pp. 1336-1345
-
-
Biard, J.F.1
Roussakis, C.2
Kornprobst, J.M.3
Gouiffes-Barbin, D.4
Verbist, J.F.5
Cotelle, P.6
-
5
-
-
75249107844
-
PyNAST: A flexible tool for aligning sequences to a template alignment
-
Caporaso JG, Bittinger K, Bushman FD, DeSantis TZ, Andersen GL, Knight R. (2010a). PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics 26: 266-267.
-
(2010)
Bioinformatics
, vol.26
, pp. 266-267
-
-
Caporaso, J.G.1
Bittinger, K.2
Bushman, F.D.3
Desantis, T.Z.4
Andersen, G.L.5
Knight, R.6
-
6
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK et al. (2010b). QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
7
-
-
0000192163
-
Patellins 1-6 and trunkamide A: Novel cyclic hexa-, hepta-and octa-peptides from colonial ascidians, Lissoclinum sp
-
Carroll AR, Coll JC, Bourne DJ, MacLeod JK, Zabriskie TM. (1996). Patellins 1-6 and trunkamide A: novel cyclic hexa-, hepta-and octa-peptides from colonial ascidians, Lissoclinum sp. Aust J Chem 49: 659-667.
-
(1996)
Aust J Chem
, vol.49
, pp. 659-667
-
-
Carroll, A.R.1
Coll, J.C.2
Bourne, D.J.3
Macleod, J.K.4
Zabriskie, T.M.5
-
8
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17: 540-552.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
9
-
-
0033519437
-
Ecological patterns in multivariate assemblages: Information and interpretation of negative values in ANOSIM tests
-
Chapman MG, Underwood AJ. (1999). Ecological patterns in multivariate assemblages: Information and interpretation of negative values in ANOSIM tests. Mar Ecol Prog Ser 180: 257-265.
-
(1999)
Mar Ecol Prog ser
, vol.180
, pp. 257-265
-
-
Chapman, M.G.1
Underwood, A.J.2
-
10
-
-
0027804103
-
Non-parametric multivariate analyses of changes in community structure
-
Clarke KR. (1993). Non-parametric multivariate analyses of changes in community structure. Aust J Ecol 18: 117-143.
-
(1993)
Aust J Ecol
, vol.18
, pp. 117-143
-
-
Clarke, K.R.1
-
12
-
-
0023686085
-
Patellazole B: A novel cytotoxic thiazole-containing macrolide from the marine tunicate Lissoclinum patella
-
Corley DG, Moore RE, Paul VJ. (1988). Patellazole B: a novel cytotoxic thiazole-containing macrolide from the marine tunicate Lissoclinum patella. J Am Chem Soc 110: 7920-7922.
-
(1988)
J Am Chem Soc
, vol.110
, pp. 7920-7922
-
-
Corley, D.G.1
Moore, R.E.2
Paul, V.J.3
-
13
-
-
84885914590
-
Bacterial communities of the gorgonian octocoral Pseudopterogorgia elisabethae
-
Correa H, Haltli B, Duque C, Kerr R. (2013). Bacterial communities of the gorgonian octocoral Pseudopterogorgia elisabethae. Microb Ecol 66: 972-985.
-
(2013)
Microb Ecol
, vol.66
, pp. 972-985
-
-
Correa, H.1
Haltli, B.2
Duque, C.3
Kerr, R.4
-
14
-
-
0024323123
-
Novel cytotoxic compounds from the ascidian Lissoclinum bistratum
-
Degnan BM, Hawkins CJ, Lavin MF, McCaffrey EJ, Parry DL, Watters DJ. (1989). Novel cytotoxic compounds from the ascidian Lissoclinum bistratum. J Med Chem 32: 1354-1359.
-
(1989)
J Med Chem
, vol.32
, pp. 1354-1359
-
-
Degnan, B.M.1
Hawkins, C.J.2
Lavin, M.F.3
McCaffrey, E.J.4
Parry, D.L.5
Watters, D.J.6
-
15
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K et al. (2006). Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069-5072.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
Desantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
-
16
-
-
84898879957
-
The gut of geographically disparate Ciona intestinalis harbors a core microbiota
-
Dishaw LJ, Flores-Torres J, Lax S, Gemayel K, Leigh B, Melillo D et al. (2014). The gut of geographically disparate Ciona intestinalis harbors a core microbiota. PLoS One 9: e93386.
-
(2014)
PLoS One
, vol.9
, pp. e93386
-
-
Dishaw, L.J.1
Flores-Torres, J.2
Lax, S.3
Gemayel, K.4
Leigh, B.5
Melillo, D.6
-
17
-
-
33751096434
-
Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians
-
DoniaMS, Hathaway BJ, Sudek S, HaygoodMG, Rosovitz MJ, Ravel J et al. (2006). Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians. Nat Chem Biol 2: 729-735.
-
(2006)
Nat Chem Biol
, vol.2
, pp. 729-735
-
-
Donia, M.S.1
Hathaway, B.J.2
Sudek, S.3
Haygood, M.G.4
Rosovitz, M.J.5
Ravel, J.6
-
19
-
-
84855492367
-
Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis
-
Donia MS, Fricke WF, Partensky F, Cox J, Elshahawi SI, White JR et al. (2011a). Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis. Proc Natl Acad Sci USA 108: E1423-E1432.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. E1423-E1432
-
-
Donia, M.S.1
Fricke, W.F.2
Partensky, F.3
Cox, J.4
Elshahawi, S.I.5
White, J.R.6
-
20
-
-
79952937941
-
Variation in tropical reef symbiont metagenomes defined by secondary metabolism
-
Donia MS, Fricke WF, Ravel J, Schmidt EW. (2011b). Variation in tropical reef symbiont metagenomes defined by secondary metabolism. PLoS One 6: e17897.
-
(2011)
PLoS One
, vol.6
, pp. e17897
-
-
Donia, M.S.1
Fricke, W.F.2
Ravel, J.3
Schmidt, E.W.4
-
21
-
-
79955979636
-
Accessing the hidden majority of marine natural products through metagenomics
-
Donia MS, Ruffner DE, Cao S, Schmidt EW. (2011c). Accessing the hidden majority of marine natural products through metagenomics. Chembiochem 12: 1230-1236.
-
(2011)
Chembiochem
, vol.12
, pp. 1230-1236
-
-
Donia, M.S.1
Ruffner, D.E.2
Cao, S.3
Schmidt, E.W.4
-
22
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
23
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
24
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. (2011). UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27: 2194-2200.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
25
-
-
84894307158
-
Down under the tunic: Bacterial biodiversity hotspots and widespread ammonia-oxidizing archaea in coral reef ascidians
-
Erwin PM, Pineda MC, Webster N, Turon X, Lopez-Legentil S. (2013). Down under the tunic: bacterial biodiversity hotspots and widespread ammonia-oxidizing archaea in coral reef ascidians. ISME J 8: 575-588.
-
(2013)
ISME J
, vol.8
, pp. 575-588
-
-
Erwin, P.M.1
Pineda, M.C.2
Webster, N.3
Turon, X.4
Lopez-Legentil, S.5
-
26
-
-
84875219536
-
Small core communities and high variability in bacteria associated with the introduced ascidian Styela plicata
-
Erwin PM, Pineda MC, Webster N, Turon X, Lopez-Legentil S. (2013). Small core communities and high variability in bacteria associated with the introduced ascidian Styela plicata. Symbiosis 59: 35-46.
-
(2013)
Symbiosis
, vol.59
, pp. 35-46
-
-
Erwin, P.M.1
Pineda, M.C.2
Webster, N.3
Turon, X.4
Lopez-Legentil, S.5
-
28
-
-
84879882426
-
Salimabromide: Unexpected chemistry from the obligate marine myxobacterium Enhygromxya salina
-
Felder S, Dreisigacker S, Kehraus S, Neu E, Bierbaum G, Wright PR et al. (2013). Salimabromide: unexpected chemistry from the obligate marine myxobacterium Enhygromxya salina. Chemistry 19: 9319-9324.
-
(2013)
Chemistry
, vol.19
, pp. 9319-9324
-
-
Felder, S.1
Dreisigacker, S.2
Kehraus, S.3
Neu, E.4
Bierbaum, G.5
Wright, P.R.6
-
29
-
-
84876774347
-
Bisucaberin B, a linear hydroxamate class siderophore from the marine bacterium Tenacibaculum mesophilum
-
Fujita MJ, Nakano K, Sakai R. (2013). Bisucaberin B, a linear hydroxamate class siderophore from the marine bacterium Tenacibaculum mesophilum. Molecules 18: 3917-3926.
-
(2013)
Molecules
, vol.18
, pp. 3917-3926
-
-
Fujita, M.J.1
Nakano, K.2
Sakai, R.3
-
30
-
-
33750339153
-
Vertical transmission of photosymbionts in the colonial ascidian Didemnum molle: The larval tunic prevents symbionts from attaching to the anterior part of larvae
-
Hirose E, Fukuda T. (2006). Vertical transmission of photosymbionts in the colonial ascidian Didemnum molle: the larval tunic prevents symbionts from attaching to the anterior part of larvae. Zoolog Sci 23: 669-674.
-
(2006)
Zoolog Sci
, vol.23
, pp. 669-674
-
-
Hirose, E.1
Fukuda, T.2
-
31
-
-
33646554525
-
UV protection in the photosymbiotic ascidian Didemnum molle inhabiting different depths
-
Hirose E, Hirabayashi S, Hori K, Kasai F, Watanabe MM. (2006). UV protection in the photosymbiotic ascidian Didemnum molle inhabiting different depths. Zoolog Sci 23: 57-63.
-
(2006)
Zoolog Sci
, vol.23
, pp. 57-63
-
-
Hirose, E.1
Hirabayashi, S.2
Hori, K.3
Kasai, F.4
Watanabe, M.M.5
-
32
-
-
84896174524
-
Enigmatic life and evolution of Prochloron and related cyanobacteria inhabiting colonial ascidians
-
Nova Science Publishers Inc.: Hauppauge, NY, USA
-
Hirose E, Neilan BA, Schmidt EW, Murakami A. (2009). Enigmatic life and evolution of Prochloron and related cyanobacteria inhabiting colonial ascidians. Handbook on Cyanobacteria. Nova Science Publishers Inc.: Hauppauge, NY, USA, pp 161-189.
-
(2009)
Handbook on Cyanobacteria
, pp. 161-189
-
-
Hirose, E.1
Neilan, B.A.2
Schmidt, E.W.3
Murakami, A.4
-
33
-
-
84861179772
-
Microbial strain prioritization using metabolomics tools for the discovery of natural products
-
Hou Y, Braun DR, Michel CR, Klassen JL, Adnani N, Wyche TP et al. (2012). Microbial strain prioritization using metabolomics tools for the discovery of natural products. Anal Chem 84: 4277-4283.
-
(2012)
Anal Chem
, vol.84
, pp. 4277-4283
-
-
Hou, Y.1
Braun, D.R.2
Michel, C.R.3
Klassen, J.L.4
Adnani, N.5
Wyche, T.P.6
-
34
-
-
0037262687
-
Chemical defense in ascidians of the didemnidae family
-
Joullie MM, Leonard MS, Portonovo P, Liang B, Ding X, La Clair JJ. (2003). Chemical defense in ascidians of the didemnidae family. Bioconjug Chem 14: 30-37.
-
(2003)
Bioconjug Chem
, vol.14
, pp. 30-37
-
-
Joullie, M.M.1
Leonard, M.S.2
Portonovo, P.3
Liang, B.4
Ding, X.5
La Clair, J.J.6
-
35
-
-
0001214183
-
Eudistomins A, D, G, H, I, J, M, N, O, P, and Q, bromo, hydroxy, pyrrolyl and iminoazepino. Beta.-carbolines from the antiviral Caribbean tunicate Eudistoma olivaceum
-
Kobayashi J, Harbour GC, Gilmore J, Rinehart KL. (1984). Eudistomins A, D, G, H, I, J, M, N, O, P, and Q, bromo, hydroxy, pyrrolyl and iminoazepino.beta.-carbolines from the antiviral Caribbean tunicate Eudistoma olivaceum. J Am Chem Soc 106: 1526-1528.
-
(1984)
J Am Chem Soc
, vol.106
, pp. 1526-1528
-
-
Kobayashi, J.1
Harbour, G.C.2
Gilmore, J.3
Rinehart, K.L.4
-
36
-
-
0026323161
-
Cystodytins D-I, new cytotoxic tetracyclic aromatic alkaloids from the Okinawan marine tunicate Cystodytes dellechiajei
-
Kobayashi J, Tsuda M, Tanabe A, Ishibashi M, Cheng JF, Yamamura S et al. (1991). Cystodytins D-I, new cytotoxic tetracyclic aromatic alkaloids from the Okinawan marine tunicate Cystodytes dellechiajei. J Nat Prod 54: 1634-1638.
-
(1991)
J Nat Prod
, vol.54
, pp. 1634-1638
-
-
Kobayashi, J.1
Tsuda, M.2
Tanabe, A.3
Ishibashi, M.4
Cheng, J.F.5
Yamamura, S.6
-
37
-
-
79952202448
-
Cytoscape: Software for visualization and analysis of biological networks
-
Kohl M, Wiese S, Warscheid B. (2011). Cytoscape: software for visualization and analysis of biological networks. Methods Mol Biol 696: 291-303.
-
(2011)
Methods Mol Biol
, vol.696
, pp. 291-303
-
-
Kohl, M.1
Wiese, S.2
Warscheid, B.3
-
38
-
-
77951914994
-
Transfer of prokaryotic algal symbionts from a tropical ascidian (Lissoclinum punctatum) colony to its larvae
-
Kojima A, Hirose E. (2010). Transfer of prokaryotic algal symbionts from a tropical ascidian (Lissoclinum punctatum) colony to its larvae. Zoolog Sci 27: 124-127.
-
(2010)
Zoolog Sci
, vol.27
, pp. 124-127
-
-
Kojima, A.1
Hirose, E.2
-
39
-
-
34249897808
-
A marine Mesorhizobium sp. Produces structurally novel long-chain N-acyl-L-homoserine lactones
-
Krick A, Kehraus S, Eberl L, Riedel K, Anke H, Kaesler I et al. (2007). A marine Mesorhizobium sp. produces structurally novel long-chain N-acyl-L-homoserine lactones. Appl Environ Microbiol 73: 3587-3594.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 3587-3594
-
-
Krick, A.1
Kehraus, S.2
Eberl, L.3
Riedel, K.4
Anke, H.5
Kaesler, I.6
-
40
-
-
84873886920
-
Genome streamlining and chemical defense in a coral reef symbiosis
-
Kwan JC, Donia MS, Han AW, Hirose E, Haygood MG, Schmidt EW. (2012). Genome streamlining and chemical defense in a coral reef symbiosis. Proc Natl Acad Sci USA 109: 20655-20660.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 20655-20660
-
-
Kwan, J.C.1
Donia, M.S.2
Han, A.W.3
Hirose, E.4
Haygood, M.G.5
Schmidt, E.W.6
-
41
-
-
84891896177
-
Bacterial endosymbiosis in a chordate host: Long-term co-evolution and conservation of secondary metabolism
-
Kwan JC, Schmidt EW. (2013). Bacterial endosymbiosis in a chordate host: long-term co-evolution and conservation of secondary metabolism. PLoS One 8: e80822.
-
(2013)
PLoS One
, vol.8
, pp. e80822
-
-
Kwan, J.C.1
Schmidt, E.W.2
-
42
-
-
84900408676
-
Host control of symbiont natural product chemistry in cryptic populations of the tunicate Lissoclinum patella
-
Kwan JC, Tianero MDB, Donia MS, Wyche TP, Bugni TS, Schmidt EW. (2014). Host control of symbiont natural product chemistry in cryptic populations of the tunicate Lissoclinum patella. PLoS One 9: e95850.
-
(2014)
PLoS One
, vol.9
, pp. e95850
-
-
Kwan, J.C.1
Tianero, M.D.B.2
Donia, M.S.3
Wyche, T.P.4
Bugni, T.S.5
Schmidt, E.W.6
-
43
-
-
84907866173
-
Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome
-
December 2013
-
Lema KA, Willis BL, Bourne DG. (2013). Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome. Environ Microbiol; e-pub ahead of print 24 December 2013; doi:10.1111/ 1462-2920.12366.
-
(2013)
Environ Microbiol; E-pub Ahead of Print
, vol.24
-
-
Lema, K.A.1
Willis, B.L.2
Bourne, D.G.3
-
44
-
-
79960004119
-
Interactive Tree of Life v2: Online annotation and display of phylogenetic trees made easy
-
Letunic I, Bork P. (2011). Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy. Nucleic Acids Res 39: W475-W478.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W475-W478
-
-
Letunic, I.1
Bork, P.2
-
45
-
-
78751575501
-
UniFrac: An effective distance metric for microbial community comparison
-
Lozupone C, Lladser ME, Knights D, Stombaugh J, Knight R. (2011). UniFrac: an effective distance metric for microbial community comparison. ISME J 5: 169-172.
-
(2011)
ISME J
, vol.5
, pp. 169-172
-
-
Lozupone, C.1
Lladser, M.E.2
Knights, D.3
Stombaugh, J.4
Knight, R.5
-
46
-
-
84875875462
-
The genome of nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer
-
Lucker S, Nowka B, Rattei T, Spieck E, Daims H. (2013). The genome of nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer. Front Microbiol 4: 27.
-
(2013)
Front Microbiol
, vol.4
, Issue.27
-
-
Lucker, S.1
Nowka, B.2
Rattei, T.3
Spieck, E.4
Daims, H.5
-
47
-
-
11144339340
-
Biological activities of pyridoacridines
-
Marshall KM, Barrows LR. (2004). Biological activities of pyridoacridines. Nat Prod Rep 21: 731-751.
-
(2004)
Nat Prod Rep
, vol.21
, pp. 731-751
-
-
Marshall, K.M.1
Barrows, L.R.2
-
48
-
-
33846054483
-
Microbial community associated with the colonial ascidian Cystodytes dellechiajei
-
Martinez-Garcia M, Diaz-Valdes M, Wanner G, Ramos-Espla A, Anton J. (2007). Microbial community associated with the colonial ascidian Cystodytes dellechiajei. Environ Microbiol 9: 521-534.
-
(2007)
Environ Microbiol
, vol.9
, pp. 521-534
-
-
Martinez-Garcia, M.1
Diaz-Valdes, M.2
Wanner, G.3
Ramos-Espla, A.4
Anton, J.5
-
49
-
-
84876427223
-
Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
-
McMurdie PJ, Holmes S. (2013). phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS One 8: e61217.
-
(2013)
PLoS One
, vol.8
, pp. e61217
-
-
McMurdie, P.J.1
Holmes, S.2
-
50
-
-
0024464131
-
Varamines A and B, new cytotoxic thioalkaloids from Lissoclinum vareau
-
Molinski TF, Ireland CM. (1989). Varamines A and B, new cytotoxic thioalkaloids from Lissoclinum vareau. J Org Chem 54: 4256-4259.
-
(1989)
J Org Chem
, vol.54
, pp. 4256-4259
-
-
Molinski, T.F.1
Ireland, C.M.2
-
51
-
-
85028149831
-
Coral Reef Ascidians of New Caledonia. Intracellular bacteria associated with the ascidian Ecteinascidia turbinata: Phylogenetic and in situ hybridisation analysis
-
Editions de 'ORSTOM: Paris, France.
-
Monniot C, Monniot F, Laboute P. (1991). Coral Reef Ascidians of New Caledonia. Editions de 'ORSTOM: Paris, France.
-
(1991)
Mar Biol
-
-
Monniot, C.1
Monniot, F.2
Laboute, P.3
-
52
-
-
0041629457
-
Intracellular bacteria associated with the ascidian Ecteinascidia turbinata: Phylogenetic and in situ hybridisation analysis
-
Moss C, Green DH, Perez B, Velasco A, Henriquez R, McKenzie JD. (2003). Intracellular bacteria associated with the ascidian Ecteinascidia turbinata: Phylogenetic and in situ hybridisation analysis. Mar Biol 143: 99-110.
-
(2003)
Mar Biol
, vol.143
, pp. 99-110
-
-
Moss, C.1
Green, D.H.2
Perez, B.3
Velasco, A.4
Henriquez, R.5
McKenzie, J.D.6
-
53
-
-
84965001094
-
-
Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O' Hara RB et al. (2013). vegan: Community Ecology Package, R Package version 2.0-8 edn.
-
(2013)
Vegan: Community Ecology Package, R Package Version 2.0-8 Edn
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
Hara R B O.'.6
-
54
-
-
84867554678
-
Assessing group differences in biodiversity by simultaneously testing a user-defined selection of diversity indices
-
Pallmann P, Schaarschmidt F, Hothorn LA, Fischer C, Nacke H, Priesnitz KU et al. (2012). Assessing group differences in biodiversity by simultaneously testing a user-defined selection of diversity indices. Mol Ecol Resour 12: 1068-1078.
-
(2012)
Mol Ecol Resour
, vol.12
, pp. 1068-1078
-
-
Pallmann, P.1
Schaarschmidt, F.2
Hothorn, L.A.3
Fischer, C.4
Nacke, H.5
Priesnitz, K.U.6
-
55
-
-
84911935821
-
Lipids in marine ecosystems
-
Parrish C. (2013). Lipids in marine ecosystems. ISRN Oceanogr 2013: article ID 604045.
-
(2013)
ISRN Oceanogr
, vol.2013
-
-
Parrish, C.1
-
56
-
-
0001517229
-
Chemical defenses of the tropical ascidian Atapozoa sp.and its nudibranch predators Nembrotha spp
-
Paul VJ, Lindquist N, Fenical W. (1990). Chemical defenses of the tropical ascidian Atapozoa sp. and its nudibranch predators Nembrotha spp. Mar Ecol Prog Ser 59: 109-118.
-
(1990)
Mar Ecol Prog ser
, vol.59
, pp. 109-118
-
-
Paul, V.J.1
Lindquist, N.2
Fenical, W.3
-
57
-
-
33747364737
-
Discovery of a marine bacterium producing 4-hydroxybenzoate and its alkyl esters, parabens
-
Peng X, Adachi K, Chen C, Kasai H, Kanoh K, Shizuri Yet al. (2006). Discovery of a marine bacterium producing 4-hydroxybenzoate and its alkyl esters, parabens. Appl Environ Microbiol 72: 5556-5561.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5556-5561
-
-
Peng, X.1
Adachi, K.2
Chen, C.3
Kasai, H.4
Kanoh, K.5
Shizuri, Y.6
-
58
-
-
0037332151
-
Bistratamides E-J, modified cyclic hexapeptides from the Philippines ascidian Lissoclinum bistratum
-
Perez LJ, Faulkner DJ. (2003). Bistratamides E-J, modified cyclic hexapeptides from the Philippines ascidian Lissoclinum bistratum. J Nat Prod 66: 247-250.
-
(2003)
J Nat Prod
, vol.66
, pp. 247-250
-
-
Perez, L.J.1
Faulkner, D.J.2
-
59
-
-
34447332478
-
Bacterial diversity associated with the Caribbean tunicate Ecteinascidia turbinata
-
Perez-Matos AE, Rosado W, Govind NS. (2007). Bacterial diversity associated with the Caribbean tunicate Ecteinascidia turbinata. Antonie Van Leeuwenhoek 92: 155-164.
-
(2007)
Antonie Van Leeuwenhoek
, vol.92
, pp. 155-164
-
-
Perez-Matos, A.E.1
Rosado, W.2
Govind, N.S.3
-
60
-
-
77954772536
-
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
-
Pluskal T, Castillo S, Villar-Briones A, Oresic M. (2010). MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics 11: 395.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 395
-
-
Pluskal, T.1
Castillo, S.2
Villar-Briones, A.3
Oresic, M.4
-
61
-
-
77949718257
-
FastTree 2-approximately maximum-likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP. (2010). FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS One 5: e9490.
-
(2010)
PLoS One
, vol.5
, pp. e9490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
62
-
-
81555208983
-
Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743
-
Rath CM, Janto B, Earl J, Ahmed A, Hu FZ, Hiller L et al. (2011). Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743. ACS Chem Biol 6: 1244-1256.
-
(2011)
ACS Chem Biol
, vol.6
, pp. 1244-1256
-
-
Rath, C.M.1
Janto, B.2
Earl, J.3
Ahmed, A.4
Hu, F.Z.5
Hiller, L.6
-
63
-
-
0033068941
-
The ecology of the myxobacteria
-
Reichenbach H. (1999). The ecology of the myxobacteria. Environ Microbiol 1: 15-21.
-
(1999)
Environ Microbiol
, vol.1
, pp. 15-21
-
-
Reichenbach, H.1
-
64
-
-
58149145729
-
Characterization of the microbial community and polyketide biosynthetic potential in the palmerolide-producing tunicate Synoicum adareanum
-
Riesenfeld CS, Murray AE, Baker BJ. (2008). Characterization of the microbial community and polyketide biosynthetic potential in the palmerolide-producing tunicate Synoicum adareanum. J Nat Prod 71: 1812-1818.
-
(2008)
J Nat Prod
, vol.71
, pp. 1812-1818
-
-
Riesenfeld, C.S.1
Murray, A.E.2
Baker, B.J.3
-
65
-
-
18844410256
-
Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella
-
Schmidt EW, Nelson JT, Rasko DA, Sudek S, Eisen JA, Haygood MG et al. (2005). Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella. Proc Natl Acad Sci USA 102: 7315-7320.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7315-7320
-
-
Schmidt, E.W.1
Nelson, J.T.2
Rasko, D.A.3
Sudek, S.4
Eisen, J.A.5
Haygood, M.G.6
-
66
-
-
64249133292
-
Chapter 23. Cyanobactin ribosomally synthesized peptides-a case of deep metagenome mining
-
Schmidt EW, Donia MS. (2009). Chapter 23. Cyanobactin ribosomally synthesized peptides-a case of deep metagenome mining. Methods Enzymol 458: 575-596.
-
(2009)
Methods Enzymol
, vol.458
, pp. 575-596
-
-
Schmidt, E.W.1
Donia, M.S.2
-
67
-
-
78349310737
-
Life in cellulose houses: Symbiotic bacterial biosynthesis of ascidian drugs and drug leads
-
Schmidt EW, Donia MS. (2010). Life in cellulose houses: symbiotic bacterial biosynthesis of ascidian drugs and drug leads. Curr Opin Biotechnol 21: 827-833.
-
(2010)
Curr Opin Biotechnol
, vol.21
, pp. 827-833
-
-
Schmidt, E.W.1
Donia, M.S.2
-
68
-
-
84857539801
-
Origin and variation of tunicate secondary metabolites
-
Schmidt EW, Donia MS, McIntosh JA, Fricke WF, Ravel J. (2012). Origin and variation of tunicate secondary metabolites. J Nat Prod 75: 295-304.
-
(2012)
J Nat Prod
, vol.75
, pp. 295-304
-
-
Schmidt, E.W.1
Donia, M.S.2
McIntosh, J.A.3
Fricke, W.F.4
Ravel, J.5
-
69
-
-
84857121586
-
Assessing the complex sponge microbiota: Core, variable and species-specific bacterial communities in marine sponges
-
Schmitt S, Tsai P, Bell J, Fromont J, IlanM, Lindquist N et al. (2012). Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J 6: 564-576.
-
(2012)
ISME J
, vol.6
, pp. 564-576
-
-
Schmitt, S.1
Tsai, P.2
Bell, J.3
Fromont, J.4
Ilan, M.5
Lindquist, N.6
-
70
-
-
42049108725
-
Bacterial aggregates in the tentacles of the sea anemone Metridium senile
-
Schuett C, Doepke H, Grathoff A, Gedde M. (2007). Bacterial aggregates in the tentacles of the sea anemone Metridium senile. Helgol Mar Res 61: 211-216.
-
(2007)
Helgol Mar Res
, vol.61
, pp. 211-216
-
-
Schuett, C.1
Doepke, H.2
Grathoff, A.3
Gedde, M.4
-
71
-
-
79959362622
-
Global diversity of Ascidiacea
-
Shenkar N, Swalla BJ. (2011). Global diversity of Ascidiacea. PLoS One 6: e20657.
-
(2011)
PLoS One
, vol.6
, pp. e20657
-
-
Shenkar, N.1
Swalla, B.J.2
-
72
-
-
79956287318
-
Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean
-
Shi Y, Tyson GW, Eppley JM, DeLong EF. (2011). Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean. ISME J 5: 999-1013.
-
(2011)
ISME J
, vol.5
, pp. 999-1013
-
-
Shi, Y.1
Tyson, G.W.2
Eppley, J.M.3
Delong, E.F.4
-
73
-
-
84856569941
-
Sponge-specific clusters revisited: A comprehensive phylogeny of sponge-associated microorganisms
-
Simister RL, Deines P, Botte ES, Webster NS, Taylor MW. (2012). Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms. Environ Microbiol 14: 517-524.
-
(2012)
Environ Microbiol
, vol.14
, pp. 517-524
-
-
Simister, R.L.1
Deines, P.2
Botte, E.S.3
Webster, N.S.4
Taylor, M.W.5
-
74
-
-
0033696661
-
An improved method for DNA isolation from mucopolysaccharide-rich molluscan tissues
-
Sokolov EP. (2000). An improved method for DNA isolation from mucopolysaccharide-rich molluscan tissues. J Mollusc Stud 66: 573-575.
-
(2000)
J Mollusc Stud
, vol.66
, pp. 573-575
-
-
Sokolov, E.P.1
-
75
-
-
84907095419
-
R: A Language and Environment for Statistical Computing
-
R Core Team Austria
-
R Core Team (2013). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing: Vienna, Austria.
-
(2013)
R Foundation for Statistical Computing: Vienna
-
-
-
76
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity GM, Tiedje JM, Cole JR. (2007). Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
77
-
-
84861409243
-
Bacterial biosynthesis and maturation of the didemnin anti-cancer agents
-
Xu Y, Kersten RD, Nam SJ, Lu L, Al-Suwailem AM, Zheng H et al. (2012). Bacterial biosynthesis and maturation of the didemnin anti-cancer agents. J Am Chem Soc 134: 8625-8632.
-
(2012)
J Am Chem Soc
, vol.134
, pp. 8625-8632
-
-
Xu, Y.1
Kersten, R.D.2
Nam, S.J.3
Lu, L.4
Al-Suwailem, A.M.5
Zheng, H.6
-
78
-
-
33745176613
-
Multiple origins of the ascidian-Prochloron symbiosis: Molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences
-
Yokobori S, Kurabayashi A, Neilan BA, Maruyama T, Hirose E. (2006). Multiple origins of the ascidian-Prochloron symbiosis: molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences. Mol Phylogenet Evol 40: 8-19.
-
(2006)
Mol Phylogenet Evol
, vol.40
, pp. 8-19
-
-
Yokobori, S.1
Kurabayashi, A.2
Neilan, B.A.3
Maruyama, T.4
Hirose, E.5
-
79
-
-
0023792179
-
Patellazole C: A novel cytotoxic macrolide from Lissoclinum patella
-
Zabriskie TM, Mayne CL, Ireland CM. (1988). Patellazole C: A novel cytotoxic macrolide from Lissoclinum patella. J Am Chem Soc 110: 7919-7920.
-
(1988)
J Am Chem Soc
, vol.110
, pp. 7919-7920
-
-
Zabriskie, T.M.1
Mayne, C.L.2
Ireland, C.M.3
|