Response of peripheral rhythms to the timing of food intake

Methods in Enzymology

Volumn 552, Issue , 2015, Pages 145-161

  Hatori, Megumi ^a   Panda, Satchidananda ^b  

^a KEIO UNIVERSITY   (Japan)

^b SALK INSTITUTE FOR BIOLOGICAL STUDIES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; TRANSCRIPTOME;

AGE; ANIMAL TISSUE; ARTICLE; CIRCADIAN RHYTHM; DIET RESTRICTION; DIETARY INTAKE; EXPERIMENTAL MOUSE; FEEDING BEHAVIOR; FOOD INTAKE; FOOD QUALITY; GENE EXPRESSION PROFILING; ILLUMINATION; LABORATORY; METABOLOME; MOLECULAR CLOCK; MONITORING; MOUSE; NONHUMAN; NUTRITION; PHYSIOLOGICAL PROCESS; PRIORITY JOURNAL; STRAIN DIFFERENCE; TRANSCRIPTOMICS; ANIMAL; DIET; INBRED MOUSE STRAIN;

ANIMALIA; MUS;

ANIMALS; CIRCADIAN RHYTHM; DIET; FEEDING BEHAVIOR; MICE; MICE, INBRED STRAINS;

EID: 84923312769     PISSN: 00766879     EISSN: 15577988     Source Type: Book Series    
DOI: 10.1016/bs.mie.2014.10.027     Document Type: Chapter

References (46)

1. Y. Adamovich, L. Rousso-Noori, Z. Zwighaft, A. Neufeld-Cohen, M. Golik, and J. Kraut-Cohen Circadian clocks and feeding time regulate the oscillations and levels of hepatic triglycerides Cell Metabolism 19 2 2014 319 330
2. R.A. Akhtar, A.B. Reddy, E.S. Maywood, J.D. Clayton, V.M. King, and A.G. Smith Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus Current Biology 12 7 2002 540 550
3. G. Asher, H. Reinke, M. Altmeyer, M. Gutierrez-Arcelus, M.O. Hottiger, and U. Schibler Poly(ADP-ribose) polymerase 1 participates in the phase entrainment of circadian clocks to feeding Cell 142 6 2010 943 953
4. A. Balsalobre, S.A. Brown, L. Marcacci, F. Tronche, C. Kellendonk, and H.M. Reichardt Resetting of circadian time in peripheral tissues by glucocorticoid signaling Science 289 5488 2000 2344 2347
5. A. Balsalobre, L. Marcacci, and U. Schibler Multiple signaling pathways elicit circadian gene expression in cultured Rat-1 fibroblasts Current Biology 10 20 2000 1291 1294
6. J.L. Barclay, J. Husse, B. Bode, N. Naujokat, J. Meyer-Kovac, and S.M. Schmid Circadian desynchrony promotes metabolic disruption in a mouse model of shiftwork PLoS One 7 5 2012 e37150
7. J.L. Barclay, A. Shostak, A. Leliavski, A.H. Tsang, O. Jöhren, and H. Müller-Fielitz High-fat diet-induced hyperinsulinemia and tissue-specific insulin resistance in Cry-deficient mice American Journal of Physiology, Endocrinology and Metabolism 304 10 2013 E1053 E1063
8. J. Bass Circadian topology of metabolism Nature 491 7424 2012 348 356
9. H. Cho, X. Zhao, M. Hatori, R.T. Yu, G.D. Barish, and M.T. Lam Regulation of circadian behaviour and metabolism by REV-ERB-alpha and REV-ERB-beta Nature 485 7396 2012 123 127
10. F. Damiola, N. Le Minh, N. Preitner, B. Kornmann, F. Fleury-Olela, and U. Schibler Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus Genes & Development 14 23 2000 2950 2961
11. S. Davis, D.K. Mirick, and R.G. Stevens Night shift work, light at night, and risk of breast cancer Journal of the National Cancer Institute 93 20 2001 1557 1562
12. J.A. Evans, S.N. Carter, D.A. Freeman, and M.R. Gorman Dim nighttime illumination alters photoperiodic responses of hamsters through the intergeniculate leaflet and other photic pathways Neuroscience 202 2012 300 308
13. J.A. Evans, J.A. Elliott, and M.R. Gorman Dim nighttime illumination interacts with parametric effects of bright light to increase the stability of circadian rhythm bifurcation in hamsters Chronobiology International 28 6 2011 488 496
14. P.C. Even, A. Mokhtarian, and A. Pele Practical aspects of indirect calorimetry in laboratory animals Neuroscience & Biobehavioral Reviews 18 3 1994 435 447
15. L.K. Fonken, J.L. Workman, J.C. Walton, Z.M. Weil, J.S. Morris, and A. Haim Light at night increases body mass by shifting the time of food intake Proceedings of the National Academy of Sciences of the United States of America 107 43 2010 18664 18669
16. S. Gill, and S. Panda Feeding mistiming decreases reproductive fitness in flies Cell Metabolism 13 6 2011 613 614
17. M.H. Hastings, A.B. Reddy, and E.S. Maywood A clockwork web: Circadian timing in brain and periphery, in health and disease Nature Reviews. Neuroscience 4 8 2003 649 661
18. M. Hatori, and S. Panda The emerging roles of melanopsin in behavioral adaptation to light Trends in Molecular Medicine 16 10 2010 435 446
19. M. Hatori, C. Vollmers, A. Zarrinpar, L. DiTacchio, E.A. Bushong, and S. Gill Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet Cell Metabolism 15 6 2012 848 860
20. J.B. Hogenesch, S. Panda, S. Kay, and J.S. Takahashi Circadian transcriptional output in the SCN and liver of the mouse Novartis Foundation Symposium 253 2003 171 180 discussion 152-175, 102-179, 180-173 passim
21. M. Hughes, L. Deharo, S.R. Pulivarthy, J. Gu, K. Hayes, and S. Panda High-resolution time course analysis of gene expression from pituitary Cold Spring Harbor Symposia on Quantitative Biology 72 2007 381 386
22. M.E. Hughes, L. DiTacchio, K.R. Hayes, C. Vollmers, S. Pulivarthy, and J.E. Baggs Harmonics of circadian gene transcription in mammals PLoS Genetics 5 4 2009 e1000442
23. B. Karlsson, A. Knutsson, and B. Lindahl Is there an association between shift work and having a metabolic syndrome? Results from a population based study of 27,485 people Occupational and Environmental Medicine 58 11 2001 747 752
24. A. Kohsaka, A.D. Laposky, K.M. Ramsey, C. Estrada, C. Joshu, and Y. Kobayashi High-fat diet disrupts behavioral and molecular circadian rhythms in mice Cell Metabolism 6 5 2007 414 421
25. N. Koike, S.H. Yoo, H.C. Huang, V. Kumar, C. Lee, and T.K. Kim Transcriptional architecture and chromatin landscape of the core circadian clock in mammals Science 338 6105 2012 349 354
26. K.A. Lamia, K.F. Storch, and C.J. Weitz Physiological significance of a peripheral tissue circadian clock Proceedings of the National Academy of Sciences of the United States of America 105 39 2008 15172 15177
27. Z. Liu, M. Huang, X. Wu, G. Shi, L. Xing, and Z. Dong PER1 phosphorylation specifies feeding rhythm in mice Cell Reports 7 5 2014 1509 1520
28. B. Marcheva, K.M. Ramsey, E.D. Buhr, Y. Kobayashi, H. Su, and C.H. Ko Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes Nature 466 7306 2010 627 631
29. J.J. McCarthy, J.L. Andrews, E.L. McDearmon, K.S. Campbell, B.K. Barber, and B.H. Miller Identification of the circadian transcriptome in adult mouse skeletal muscle Physiological Genomics 31 1 2007 86 95
30. B.H. Miller, E.L. McDearmon, S. Panda, K.R. Hayes, J. Zhang, and J.L. Andrews Circadian and CLOCK-controlled regulation of the mouse transcriptome and cell proliferation Proceedings of the National Academy of Sciences of the United States of America 104 9 2007 3342 3347
31. S. Panda, M.P. Antoch, B.H. Miller, A.I. Su, A.B. Schook, and M. Straume Coordinated transcription of key pathways in the mouse by the circadian clock Cell 109 3 2002 307 320
32. G. Rey, F. Cesbron, J. Rougemont, H. Reinke, M. Brunner, and F. Naef Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liver PLoS Biology 9 2 2011 e1000595
33. R.D. Rudic, P. McNamara, A.M. Curtis, R.C. Boston, S. Panda, and J.B. Hogenesch BMAL1 and CLOCK, two essential components of the circadian clock, are involved in glucose homeostasis PLoS Biology 2 11 2004 e377
34. R.D. Rudic, P. McNamara, D. Reilly, T. Grosser, A.M. Curtis, and T.S. Price Bioinformatic analysis of circadian gene oscillation in mouse aorta Circulation 112 17 2005 2716 2724
35. L.A. Sadacca, K.A. Lamia, A.S. deLemos, B. Blum, and C.J. Weitz An intrinsic circadian clock of the pancreas is required for normal insulin release and glucose homeostasis in mice Diabetologia 54 1 2011 120 124
36. C. Saini, A. Liani, P. Gos, F. Kreppel, Y. Emmenegger, and L. Bonacina Real-time recording of circadian liver gene expression in freely moving mice reveals the phase-setting behavior of hepatocyte clocks Genes & Development 27 13 2013 1526 1536
37. T.K. Sato, S. Panda, L.J. Miraglia, T.M. Reyes, R.D. Rudic, and P. McNamara A functional genomics strategy reveals Rora as a component of the mammalian circadian clock Neuron 43 4 2004 527 537
38. W.J. Schwartz, and P. Zimmerman Circadian timekeeping in BALB/c and C57BL/6 inbred mouse strains The Journal of Neuroscience 10 11 1990 3685 3694
39. K. Shimomura, S.S. Low-Zeddies, D.P. King, T.D. Steeves, A. Whiteley, and J. Kushla Genome-wide epistatic interaction analysis reveals complex genetic determinants of circadian behavior in mice Genome Research 11 6 2001 959 980
40. S.M. Siepka, and J.S. Takahashi Methods to record circadian rhythm wheel running activity in mice Methods in Enzymology 393 2005 230 239
41. K.A. Stokkan, S. Yamazaki, H. Tei, Y. Sakaki, and M. Menaker Entrainment of the circadian clock in the liver by feeding Science 291 5503 2001 490 493
42. K.L. Toh, C.R. Jones, Y. He, E.J. Eide, W.A. Hinz, and D.M. Virshup An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome Science 291 5506 2001 1040 1043
43. H.R. Ueda, W. Chen, A. Adachi, H. Wakamatsu, S. Hayashi, and T. Takasugi A transcription factor response element for gene expression during circadian night Nature 418 6897 2002 534 539
44. C. Vollmers, S. Gill, L. DiTacchio, S.R. Pulivarthy, H.D. Le, and S. Panda Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression Proceedings of the National Academy of Sciences of the United States of America 106 50 2009 21453 21458
45. C. Vollmers, R.J. Schmitz, J. Nathanson, G. Yeo, J.R. Ecker, and S. Panda Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome Cell Metabolism 16 6 2012 833 845
46. D.B. West, C.N. Boozer, D.L. Moody, and R.L. Atkinson Dietary obesity in nine inbred mouse strains The American Journal of Physiology 262 6 Pt 2 1992 R1025 R1032