-
2
-
-
84899415536
-
CTCF: An architectural protein bridging genome topology and function
-
Ong C-T, Corces VG (2014) CTCF: An architectural protein bridging genome topology and function. Nat Rev Genet 15(4):234-246.
-
(2014)
Nat Rev Genet
, vol.15
, Issue.4
, pp. 234-246
-
-
Ong, C.-T.1
Corces, V.G.2
-
3
-
-
82155188552
-
The tumor suppressor role of CTCF
-
Fiorentino FP, Giordano A (2012) The tumor suppressor role of CTCF. J Cell Physiol 227(2):479-492.
-
(2012)
J Cell Physiol
, vol.227
, Issue.2
, pp. 479-492
-
-
Fiorentino, F.P.1
Giordano, A.2
-
4
-
-
60149095014
-
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains
-
Cuddapah S, et al. (2009) Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains. Genome Res 19(1):24-32.
-
(2009)
Genome Res
, vol.19
, Issue.1
, pp. 24-32
-
-
Cuddapah, S.1
-
5
-
-
33847200412
-
CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide
-
Chernukhin I, et al. (2007) CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide. Mol Cell Biol 27(5):1631-1648.
-
(2007)
Mol Cell Biol
, vol.27
, Issue.5
, pp. 1631-1648
-
-
Chernukhin, I.1
-
6
-
-
78649921825
-
Functional analysis of CTCF during mammalian limb development
-
Soshnikova N, Montavon T, Leleu M, Galjart N, Duboule D (2010) Functional analysis of CTCF during mammalian limb development. Dev Cell 19(6):819-830.
-
(2010)
Dev Cell
, vol.19
, Issue.6
, pp. 819-830
-
-
Soshnikova, N.1
Montavon, T.2
Leleu, M.3
Galjart, N.4
Duboule, D.5
-
7
-
-
0037059774
-
A region to the N-terminal side of the CTCF zinc finger domain is essential for activating transcription from the amyloid precursor protein promoter
-
Vostrov AA, Taheny MJ, Quitschke WW (2002) A region to the N-terminal side of the CTCF zinc finger domain is essential for activating transcription from the amyloid precursor protein promoter. J Biol Chem 277(2):1619-1627.
-
(2002)
J Biol Chem
, vol.277
, Issue.2
, pp. 1619-1627
-
-
Vostrov, A.A.1
Taheny, M.J.2
Quitschke, W.W.3
-
8
-
-
84898854590
-
CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53
-
Saldaña-Meyer R, et al. (2014) CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53. Genes Dev 28(7):723-734.
-
(2014)
Genes Dev
, vol.28
, Issue.7
, pp. 723-734
-
-
Saldaña-Meyer, R.1
-
9
-
-
80455176999
-
CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
-
Shukla S, et al. (2011) CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing. Nature 479(7371):74-79.
-
(2011)
Nature
, vol.479
, Issue.7371
, pp. 74-79
-
-
Shukla, S.1
-
10
-
-
84861095603
-
Topological domains in mammalian genomes identified by analysis of chromatin interactions
-
Dixon JR, et al. (2012) Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature 485(7398):376-380.
-
(2012)
Nature
, vol.485
, Issue.7398
, pp. 376-380
-
-
Dixon, J.R.1
-
11
-
-
79959699992
-
CTCF-mediated functional chromatin interactome in pluripotent cells
-
Handoko L, et al. (2011) CTCF-mediated functional chromatin interactome in pluripotent cells. Nat Genet 43(7):630-638.
-
(2011)
Nat Genet
, vol.43
, Issue.7
, pp. 630-638
-
-
Handoko, L.1
-
12
-
-
80053952320
-
CTCF function is modulated by neighboring DNA binding factors
-
Weth O, Renkawitz R (2011) CTCF function is modulated by neighboring DNA binding factors. Biochem Cell Biol 89(5):459-468.
-
(2011)
Biochem Cell Biol
, vol.89
, Issue.5
, pp. 459-468
-
-
Weth, O.1
Renkawitz, R.2
-
13
-
-
35548990188
-
We gather together: Insulators and genome organization
-
Wallace JA, Felsenfeld G (2007) We gather together: Insulators and genome organization. Curr Opin Genet Dev 17(5):400-407.
-
(2007)
Curr Opin Genet Dev
, vol.17
, Issue.5
, pp. 400-407
-
-
Wallace, J.A.1
Felsenfeld, G.2
-
14
-
-
33747885707
-
CTCF-dependent chromatin insulator is linked to epigenetic remodeling
-
Ishihara K, Oshimura M, Nakao M (2006) CTCF-dependent chromatin insulator is linked to epigenetic remodeling. Mol Cell 23(5):733-742.
-
(2006)
Mol Cell
, vol.23
, Issue.5
, pp. 733-742
-
-
Ishihara, K.1
Oshimura, M.2
Nakao, M.3
-
15
-
-
79958065572
-
Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity
-
Xiao T, Wallace J, Felsenfeld G (2011) Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity. Mol Cell Biol 31(11):2174-2183.
-
(2011)
Mol Cell Biol
, vol.31
, Issue.11
, pp. 2174-2183
-
-
Xiao, T.1
Wallace, J.2
Felsenfeld, G.3
-
16
-
-
78349252731
-
Mediation of CTCF transcriptional insulation by DEAD-box RNAbinding protein p68 and steroid receptor RNA activator SRA
-
Yao H, et al. (2010) Mediation of CTCF transcriptional insulation by DEAD-box RNAbinding protein p68 and steroid receptor RNA activator SRA. Genes Dev 24(22): 2543-2555.
-
(2010)
Genes Dev
, vol.24
, Issue.22
, pp. 2543-2555
-
-
Yao, H.1
-
17
-
-
33845969545
-
Identification of a CTCF cofactor, Yy1, for the X chromosome binary switch
-
Donohoe ME, Zhang L-F, Xu N, Shi Y, Lee JT (2007) Identification of a CTCF cofactor, Yy1, for the X chromosome binary switch. Mol Cell 25(1):43-56.
-
(2007)
Mol Cell
, vol.25
, Issue.1
, pp. 43-56
-
-
Donohoe, M.E.1
Zhang, L.-F.2
Xu, N.3
Shi, Y.4
Lee, J.T.5
-
18
-
-
0034703086
-
Physical and functional interaction between two pluripotent proteins, the Y-box DNA/RNA-binding factor, YB-1, and the multivalent zinc finger factor, CTCF
-
Chernukhin IV, et al. (2000) Physical and functional interaction between two pluripotent proteins, the Y-box DNA/RNA-binding factor, YB-1, and the multivalent zinc finger factor, CTCF. J Biol Chem 275(38):29915-29921.
-
(2000)
J Biol Chem
, vol.275
, Issue.38
, pp. 29915-29921
-
-
Chernukhin, I.V.1
-
19
-
-
84875127327
-
CTCF and cohesin: Linking gene regulatory elements with their targets
-
Merkenschlager M, Odom DT (2013) CTCF and cohesin: Linking gene regulatory elements with their targets. Cell 152(6):1285-1297.
-
(2013)
Cell
, vol.152
, Issue.6
, pp. 1285-1297
-
-
Merkenschlager, M.1
Odom, D.T.2
-
20
-
-
0842310349
-
CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species
-
Yusufzai TM, Tagami H, Nakatani Y, Felsenfeld G (2004) CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species. Mol Cell 13(2):291-298.
-
(2004)
Mol Cell
, vol.13
, Issue.2
, pp. 291-298
-
-
Yusufzai, T.M.1
Tagami, H.2
Nakatani, Y.3
Felsenfeld, G.4
-
21
-
-
34948900929
-
The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning
-
Mohan M, et al. (2007) The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning. EMBO J 26(19):4203-4214.
-
(2007)
EMBO J
, vol.26
, Issue.19
, pp. 4203-4214
-
-
Mohan, M.1
-
22
-
-
84878590595
-
A genome-wide map of CTCF multivalency redefines the CTCF code
-
Nakahashi H, et al. (2013) A genome-wide map of CTCF multivalency redefines the CTCF code. Cell Reports 3(5):1678-1689.
-
(2013)
Cell Reports
, vol.3
, Issue.5
, pp. 1678-1689
-
-
Nakahashi, H.1
-
23
-
-
84903954669
-
Genomic and proteomic analysis of transcription factor TFII-I reveals insight into the response to cellular stress
-
Fan AX, et al. (2014) Genomic and proteomic analysis of transcription factor TFII-I reveals insight into the response to cellular stress. Nucleic Acids Res 42(12):7625-7641.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.12
, pp. 7625-7641
-
-
Fan, A.X.1
-
24
-
-
0025996912
-
Cooperative interaction of an initiator-binding transcription initiation factor and the helix-loop-helix activator USF
-
Roy AL, Meisterernst M, Pognonec P, Roeder RG (1991) Cooperative interaction of an initiator-binding transcription initiation factor and the helix-loop-helix activator USF. Nature 354(6350):245-248.
-
(1991)
Nature
, vol.354
, Issue.6350
, pp. 245-248
-
-
Roy, A.L.1
Meisterernst, M.2
Pognonec, P.3
Roeder, R.G.4
-
25
-
-
0032509536
-
Regulation of TFII-I activity by phosphorylation
-
Novina CD, Cheriyath V, Roy AL (1998) Regulation of TFII-I activity by phosphorylation. J Biol Chem 273(50):33443-33448.
-
(1998)
J Biol Chem
, vol.273
, Issue.50
, pp. 33443-33448
-
-
Novina, C.D.1
Cheriyath, V.2
Roy, A.L.3
-
26
-
-
33749656892
-
Opposing functions of TFII-I spliced isoforms in growth factorinduced gene expression
-
Hakre S, et al. (2006) Opposing functions of TFII-I spliced isoforms in growth factorinduced gene expression. Mol Cell 24(2):301-308.
-
(2006)
Mol Cell
, vol.24
, Issue.2
, pp. 301-308
-
-
Hakre, S.1
-
27
-
-
65549159993
-
Epigenetic silencing of the p16(INK4a) tumor suppressor is associated with loss of CTCF binding and a chromatin boundary
-
Witcher M, Emerson BM (2009) Epigenetic silencing of the p16(INK4a) tumor suppressor is associated with loss of CTCF binding and a chromatin boundary. Mol Cell 34(3):271-284.
-
(2009)
Mol Cell
, vol.34
, Issue.3
, pp. 271-284
-
-
Witcher, M.1
Emerson, B.M.2
-
28
-
-
70349760656
-
-
Reinders J, Sickmann A Humana, New York
-
Weiss W, Görg A (2009) High-Resolution Two-Dimensional Electrophoresis. Proteomics, Methods in Molecular Biology, eds Reinders J, Sickmann A (Humana, New York), Vol 564, pp 13-32.
-
(2009)
High-Resolution Two-Dimensional Electrophoresis. Proteomics, Methods in Molecular Biology
, vol.564
, pp. 13-32
-
-
Weiss, W.1
Görg, A.2
-
29
-
-
79955163875
-
A practical guide to evaluating colocalization in biological microscopy
-
Dunn KW, Kamocka MM, McDonald JH (2011) A practical guide to evaluating colocalization in biological microscopy. Am J Physiol Cell Physiol 300(4):C723-C742.
-
(2011)
Am J Physiol Cell Physiol
, vol.300
, Issue.4
, pp. C723-C742
-
-
Dunn, K.W.1
Kamocka, M.M.2
McDonald, J.H.3
-
30
-
-
78049456151
-
CTCF regulates the local epigenetic state of ribosomal DNA repeats
-
van de Nobelen S, et al. (2010) CTCF regulates the local epigenetic state of ribosomal DNA repeats. Epigenetics Chromatin 3(1):19.
-
(2010)
Epigenetics Chromatin
, vol.3
, Issue.1
, pp. 19
-
-
Van De Nobelen, S.1
-
31
-
-
0033984934
-
Extracellular signal-regulated kinase binds to TFII-I and regulates its activation of the c-fos promoter
-
Kim D-W, Cochran BH (2000) Extracellular signal-regulated kinase binds to TFII-I and regulates its activation of the c-fos promoter. Mol Cell Biol 20(4):1140-1148.
-
(2000)
Mol Cell Biol
, vol.20
, Issue.4
, pp. 1140-1148
-
-
Kim, D.-W.1
Cochran, B.H.2
-
32
-
-
33847371073
-
Cutting edge: TFII-I controls B cell proliferation via regulating NF-kappaB
-
Ashworth T, Roy AL (2007) Cutting edge: TFII-I controls B cell proliferation via regulating NF-kappaB. J Immunol 178(5):2631-2635.
-
(2007)
J Immunol
, vol.178
, Issue.5
, pp. 2631-2635
-
-
Ashworth, T.1
Roy, A.L.2
-
33
-
-
77951037516
-
Epigenetic regulation of the human p53 gene promoter by the CTCF transcription factor in transformed cell lines
-
Soto-Reyes E, Recillas-Targa F (2010) Epigenetic regulation of the human p53 gene promoter by the CTCF transcription factor in transformed cell lines. Oncogene 29(15): 2217-2227.
-
(2010)
Oncogene
, vol.29
, Issue.15
, pp. 2217-2227
-
-
Soto-Reyes, E.1
Recillas-Targa, F.2
-
34
-
-
33748259774
-
CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus
-
Splinter E, et al. (2006) CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus. Genes Dev 20(17):2349-2354.
-
(2006)
Genes Dev
, vol.20
, Issue.17
, pp. 2349-2354
-
-
Splinter, E.1
-
35
-
-
0033542484
-
Enhancement of TBP binding by activators and general transcription factors
-
Li X-Y, Virbasius A, Zhu X, Green MR (1999) Enhancement of TBP binding by activators and general transcription factors. Nature 399(6736):605-609.
-
(1999)
Nature
, vol.399
, Issue.6736
, pp. 605-609
-
-
Li, X.-Y.1
Virbasius, A.2
Zhu, X.3
Green, M.R.4
-
36
-
-
44149124228
-
Cracking the RNA polymerase II CTD code
-
Egloff S, Murphy S (2008) Cracking the RNA polymerase II CTD code. Trends Genet 24(6):280-288.
-
(2008)
Trends Genet
, vol.24
, Issue.6
, pp. 280-288
-
-
Egloff, S.1
Murphy, S.2
-
37
-
-
84892653664
-
RNA polymerase II CTD modifications: How many tales from a single tail
-
Napolitano G, Lania L, Majello B (2014) RNA polymerase II CTD modifications: How many tales from a single tail. J Cell Physiol 229(5):538-544.
-
(2014)
J Cell Physiol
, vol.229
, Issue.5
, pp. 538-544
-
-
Napolitano, G.1
Lania, L.2
Majello, B.3
-
38
-
-
79960284319
-
Requirement of TFIIH kinase subunit Mat1 for RNA Pol II Cterminal domain Ser5 phosphorylation, transcription and mRNA turnover
-
Helenius K, et al. (2011) Requirement of TFIIH kinase subunit Mat1 for RNA Pol II Cterminal domain Ser5 phosphorylation, transcription and mRNA turnover. Nucleic Acids Res 39(12):5025-5035.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.12
, pp. 5025-5035
-
-
Helenius, K.1
-
39
-
-
0033611561
-
Cyclin C/CDK8 and cyclin H/CDK7/p36 are biochemically distinct CTD kinases
-
Rickert P, Corden JL, Lees E (1999) Cyclin C/CDK8 and cyclin H/CDK7/p36 are biochemically distinct CTD kinases. Oncogene 18(4):1093-1102.
-
(1999)
Oncogene
, vol.18
, Issue.4
, pp. 1093-1102
-
-
Rickert, P.1
Corden, J.L.2
Lees, E.3
-
40
-
-
0035815612
-
Three RNA polymerase II carboxyl-terminal domain kinases display distinct substrate preferences
-
Ramanathan Y, et al. (2001) Three RNA polymerase II carboxyl-terminal domain kinases display distinct substrate preferences. J Biol Chem 276(14):10913-10920.
-
(2001)
J Biol Chem
, vol.276
, Issue.14
, pp. 10913-10920
-
-
Ramanathan, Y.1
-
41
-
-
84862493306
-
Updating the RNA polymerase CTD code: Adding gene-specific layers
-
Egloff S, Dienstbier M, Murphy S (2012) Updating the RNA polymerase CTD code: Adding gene-specific layers. Trends Genet 28(7):333-341.
-
(2012)
Trends Genet
, vol.28
, Issue.7
, pp. 333-341
-
-
Egloff, S.1
Dienstbier, M.2
Murphy, S.3
-
43
-
-
80052297694
-
Control of embryonic stem cell lineage commitment by core promoter factor, TAF3
-
Liu Z, Scannell DR, Eisen MB, Tjian R (2011) Control of embryonic stem cell lineage commitment by core promoter factor, TAF3. Cell 146(5):720-731.
-
(2011)
Cell
, vol.146
, Issue.5
, pp. 720-731
-
-
Liu, Z.1
Scannell, D.R.2
Eisen, M.B.3
Tjian, R.4
-
44
-
-
0842347413
-
Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex
-
Liu Y, et al. (2004) Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex. Mol Cell Biol 24(4):1721-1735.
-
(2004)
Mol Cell Biol
, vol.24
, Issue.4
, pp. 1721-1735
-
-
Liu, Y.1
-
45
-
-
77952328364
-
Gene-specific repression of the p53 target gene PUMA via intragenic CTCF-Cohesin binding
-
Gomes NP, Espinosa JM (2010) Gene-specific repression of the p53 target gene PUMA via intragenic CTCF-Cohesin binding. Genes Dev 24(10):1022-1034.
-
(2010)
Genes Dev
, vol.24
, Issue.10
, pp. 1022-1034
-
-
Gomes, N.P.1
Espinosa, J.M.2
-
46
-
-
84905577590
-
A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors
-
Petrini I, et al. (2014) A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors. Nat Genet 46(8):844-849.
-
(2014)
Nat Genet
, vol.46
, Issue.8
, pp. 844-849
-
-
Petrini, I.1
-
47
-
-
28544445933
-
Inhibition of TFII-I-dependent cell cycle regulation by p53
-
Desgranges ZP, et al. (2005) Inhibition of TFII-I-dependent cell cycle regulation by p53. Mol Cell Biol 25(24):10940-10952.
-
(2005)
Mol Cell Biol
, vol.25
, Issue.24
, pp. 10940-10952
-
-
Desgranges, Z.P.1
-
48
-
-
61449193297
-
Phase specific functions of the transcription factor TFII-I during cell cycle
-
Ashworth T, Roy AL (2009) Phase specific functions of the transcription factor TFII-I during cell cycle. Cell Cycle 8(4):596-605.
-
(2009)
Cell Cycle
, vol.8
, Issue.4
, pp. 596-605
-
-
Ashworth, T.1
Roy, A.L.2
-
49
-
-
32944471980
-
The expression of ketohexokinase is diminished in human clear cell type of renal cell carcinoma
-
Hwa JS, et al. (2006) The expression of ketohexokinase is diminished in human clear cell type of renal cell carcinoma. Proteomics 6(3):1077-1084.
-
(2006)
Proteomics
, vol.6
, Issue.3
, pp. 1077-1084
-
-
Hwa, J.S.1
-
50
-
-
76349090199
-
CDK8 is a positive regulator of transcriptional elongation within the serum response network
-
Donner AJ, Ebmeier CC, Taatjes DJ, Espinosa JM (2010) CDK8 is a positive regulator of transcriptional elongation within the serum response network. Nat Struct Mol Biol 17(2):194-201.
-
(2010)
Nat Struct Mol Biol
, vol.17
, Issue.2
, pp. 194-201
-
-
Donner, A.J.1
Ebmeier, C.C.2
Taatjes, D.J.3
Espinosa, J.M.4
-
51
-
-
84878831596
-
HIF1A employs CDK8-mediator to stimulate RNAPII elongation in response to hypoxia
-
Galbraith MD, et al. (2013) HIF1A employs CDK8-mediator to stimulate RNAPII elongation in response to hypoxia. Cell 153(6):1327-1339.
-
(2013)
Cell
, vol.153
, Issue.6
, pp. 1327-1339
-
-
Galbraith, M.D.1
-
52
-
-
77951987104
-
Cyclin-dependent kinase 8 positively cooperates with Mediator to promote thyroid hormone receptor-dependent transcriptional activation
-
Belakavadi M, Fondell JD (2010) Cyclin-dependent kinase 8 positively cooperates with Mediator to promote thyroid hormone receptor-dependent transcriptional activation. Mol Cell Biol 30(10):2437-2448.
-
(2010)
Mol Cell Biol
, vol.30
, Issue.10
, pp. 2437-2448
-
-
Belakavadi, M.1
Fondell, J.D.2
-
53
-
-
26844559000
-
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
-
Ishihama Y, et al. (2005) Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol Cell Proteomics 4(9):1265-1272.
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.9
, pp. 1265-1272
-
-
Ishihama, Y.1
-
54
-
-
33644872577
-
Limma: Linear models for microarray data
-
Statistics for Biology and Health, eds Gentleman R, et al (Springer, New York)
-
Smyth GK (2005) limma: Linear models for microarray data. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Statistics for Biology and Health, eds Gentleman R, et al (Springer, New York), pp 397-420.
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
, pp. 397-420
-
-
Smyth, G.K.1
-
55
-
-
58249088468
-
A handcuff model for the cohesin complex
-
Zhang N, et al. (2008) A handcuff model for the cohesin complex. J Cell Biol 183(6): 1019-1031.
-
(2008)
J Cell Biol
, vol.183
, Issue.6
, pp. 1019-1031
-
-
Zhang, N.1
-
56
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25(14):1754-1760.
-
(2009)
Bioinformatics
, vol.25
, Issue.14
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
57
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang Y, et al. (2008) Model-based analysis of ChIP-Seq (MACS). Genome Biol 9(9): R137.
-
(2008)
Genome Biol
, vol.9
, Issue.9
, pp. R137
-
-
Zhang, Y.1
-
58
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
-
Heinz S, et al. (2010) Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol Cell 38(4):576-589.
-
(2010)
Mol Cell
, vol.38
, Issue.4
, pp. 576-589
-
-
Heinz, S.1
-
59
-
-
79953699973
-
SeqMINER: An integrated ChIP-seq data interpretation platform
-
Ye T, et al. (2011) seqMINER: An integrated ChIP-seq data interpretation platform. Nucleic Acids Res 39(6):e35.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.6
, pp. e35
-
-
Ye, T.1
-
60
-
-
24044522270
-
BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis
-
Durinck S, et al. (2005) BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis. Bioinformatics 21(16):3439-3440.
-
(2005)
Bioinformatics
, vol.21
, Issue.16
, pp. 3439-3440
-
-
Durinck, S.1
-
61
-
-
33846689706
-
Using GOstats to test gene lists for GO term association
-
Falcon S, Gentleman R (2007) Using GOstats to test gene lists for GO term association. Bioinformatics 23(2):257-258.
-
(2007)
Bioinformatics
, vol.23
, Issue.2
, pp. 257-258
-
-
Falcon, S.1
Gentleman, R.2
-
62
-
-
84923149611
-
KEGGprofile: An annotation and visualization package for multitypes and multi-groups expression data in KEGG pathway
-
Shao S, Shyr Y (2012) KEGGprofile: An annotation and visualization package for multitypes and multi-groups expression data in KEGG pathway. R package version 1.6.1. Available at www.bioconductor.org/packages/release/bioc/html/KEGGprofile.html.
-
(2012)
R Package Version 1.6.1.
-
-
Shao, S.1
Shyr, Y.2
|