An incremental approach to MEDLINE MeSH indexing

CEUR Workshop Proceedings

Volumn 1094, Issue , 2013, Pages

  Zhu, Dongqing ^a   Li, Dingcheng ^b   Carterette, Ben ^a   Liu, Hongfang ^b  

^a UNIVERSITY OF DELAWARE   (United States)

^b MAYO CLINIC   (United States)

Author keywords

Biomedical semantic indexing; Information retrieval; Query formulation; Topic modeling

Indexed keywords

CLASSIFICATION (OF INFORMATION); INFORMATION RETRIEVAL; QUERY PROCESSING; SEMANTICS;

EFFECTIVE SYSTEMS; INCREMENTAL APPROACH; JOURNAL ARTICLES; MEDICAL SUBJECT HEADINGS; MEDLINE DATABASE; QUERY FORMULATION; SEMANTIC INDEXING; TOPIC MODELING;

INDEXING (OF INFORMATION);

EID: 84923078263     PISSN: 16130073     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (14)

1. Funk, M.E., Reid, C.A.: Indexing consistency in medline. Bulletin of the Medical Library Association 71(2) (1983) 176.
2. Aronson, A.R., Mork, J.G., Gay, C.W., Humphrey, S.M., Rogers, W.J.: The NLM indexing initiative's medical text indexer. Medinfo 11(Pt 1) (2004) 268-72.
3. Tsatsaronis, G., Schroeder, M., Paliouras, G., Almirantis, Y., Androutsopoulos, I., Gaussier, E., Gallinari, P., Artieres, T., Alvers, M.R., Zschunke, M., et al.: Bioasq: A challenge on large-scale biomedical semantic indexing and question answering. In: 2012 AAAI Fall Symposium Series. (2012).
4. Androutsopoulos, I.: A challenge on large-scale biomedical semantic indexing and question answering. In: BioNLP Workshop. (8 2013).
5. Kim, W., Aronson, A.R., Wilbur, W.J.: Automatic mesh term assignment and quality assessment. In: Proceedings of the AMIA Symposium, American Medical Informatics Association (2001) 319.
6. Aronson, A.R.: Effective mapping of biomedical text to the UMLS metathesaurus: The MetaMap program. Proceedings of AMIA Symposium (2001) 17-21.
7. Lin, J., Wilbur, W.J.: Pubmed related articles: A probabilistic topic-based model for content similarity. BMC bioinformatics 8(1) (2007) 423.
8. Jimeno Yepes, A., Mork, J.G., Wilkowski, B., Demner Fushman, D., Aronson, A.R.: Medline mesh indexing: lessons learned from machine learning and future directions. In: Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium, ACM (2012) 737-742.
9. Huang, M., Névéol, A., Lu, Z.: Recommending mesh terms for annotating biomedical articles. Journal of the American Medical Informatics Association 18(5) (2011) 660-667.
10. Strohman, T., Metzler, D., Turtle, H., Croft, W.B.: Indri: A language model-based search engine for complex queries. In: Proceedings of the International Conference on Intelligent Analysis. (2005).
11. Hersh, W.: Information Retrieval: A Health and Biomedical Perspective. Third edn. Health Informatics. Springer (2009).
12. Chen, S.F., Goodman, J.: An empirical study of smoothing techniques for language modeling. In: Proceedings of the 34th annual meeting on Association for Computational Linguistics, Association for Computational Linguistics (1996) 310-318.
13. Zhai, C., Lafferty, J.: A study of smoothing methods for language models applied to ad hoc information retrieval. In: Proceedings of SIGIR. (2001) 334-342.
14. Ramage, D., Hall, D., Nallapati, R., Manning, C.D.: Labeled LDA: A supervised topic model for credit attribution in multi-labeled corpora. In: Proceedings of EMNLP: Volume 1 - Volume 1. (2009) 248-256.