-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J.H., Zhang Z., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25:3389.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
-
2
-
-
27144489108
-
Protein database searches using compositionally adjusted substitution matrices
-
Altschul S.F., Wootton J.C., Gertz E.M., Agarwala R., Morgulis A., et al. Protein database searches using compositionally adjusted substitution matrices. FEBS J. 2005, 272:5101.
-
(2005)
FEBS J.
, vol.272
, pp. 5101
-
-
Altschul, S.F.1
Wootton, J.C.2
Gertz, E.M.3
Agarwala, R.4
Morgulis, A.5
-
4
-
-
67649111383
-
Coccidioidal meningitis: update on epidemiology, clinical features, diagnosis, and management
-
Blair J.E. Coccidioidal meningitis: update on epidemiology, clinical features, diagnosis, and management. Curr. Infect. Dis. Rep. 2009, 11:289.
-
(2009)
Curr. Infect. Dis. Rep.
, vol.11
, pp. 289
-
-
Blair, J.E.1
-
5
-
-
33751435156
-
Serologic testing for symptomatic coccidioidomycosis in immunocompetent and immunosuppressed hosts
-
Blair J.E., Coakley B., Santelli A.C., Hentz J.G., Wengenack N.L. Serologic testing for symptomatic coccidioidomycosis in immunocompetent and immunosuppressed hosts. Mycopathologia 2006, 162:317.
-
(2006)
Mycopathologia
, vol.162
, pp. 317
-
-
Blair, J.E.1
Coakley, B.2
Santelli, A.C.3
Hentz, J.G.4
Wengenack, N.L.5
-
6
-
-
84871502341
-
Hidden killers: human fungal infections
-
Brown G.D., Denning D.W., Gow N.A.R., Levitz S.M., Netea M.G., et al. Hidden killers: human fungal infections. Sci. Transl. Med. 2012, 4.
-
(2012)
Sci. Transl. Med.
, vol.4
-
-
Brown, G.D.1
Denning, D.W.2
Gow, N.A.R.3
Levitz, S.M.4
Netea, M.G.5
-
7
-
-
84870659704
-
High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays
-
Buus S., Rockberg J., Forsstrom B., Nilsson P., Uhlen M., et al. High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays. Mol. Cell. Proteomics 2012, 11:1790.
-
(2012)
Mol. Cell. Proteomics
, vol.11
, pp. 1790
-
-
Buus, S.1
Rockberg, J.2
Forsstrom, B.3
Nilsson, P.4
Uhlen, M.5
-
8
-
-
85028168158
-
-
Centers for Disease Control and Prevention Tularemia webpage 2011.
-
(2011)
Tularemia webpage
-
-
-
9
-
-
84861209926
-
Do natural proteins differ from random sequences polypeptides? Natural vs. random proteins classification using an evolutionary neural network
-
De Lucrezia D., Slanzi D., Poli I., Polticelli F., Minervini G. Do natural proteins differ from random sequences polypeptides? Natural vs. random proteins classification using an evolutionary neural network. PLoS ONE 2012, 7.
-
(2012)
PLoS ONE
, vol.7
-
-
De Lucrezia, D.1
Slanzi, D.2
Poli, I.3
Polticelli, F.4
Minervini, G.5
-
10
-
-
57549100397
-
Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis
-
Gaseitsiwe S., Valentini D., Mahdavifar S., Magalhaes I., Hoft D.F., et al. Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis. PLoS ONE 2008, 3.
-
(2008)
PLoS ONE
, vol.3
-
-
Gaseitsiwe, S.1
Valentini, D.2
Mahdavifar, S.3
Magalhaes, I.4
Hoft, D.F.5
-
11
-
-
0016197604
-
Amino-acid difference formula to help explain protein evolution
-
Grantham R. Amino-acid difference formula to help explain protein evolution. Science 1974, 185:862.
-
(1974)
Science
, vol.185
, pp. 862
-
-
Grantham, R.1
-
12
-
-
0025082734
-
Itraconazole treatment of coccidioidomycosis
-
Graybill J.R., Stevens D.A., Galgiani J.N., Dismukes W.E., Cloud G.A. Itraconazole treatment of coccidioidomycosis. Am. J. Med. 1990, 89:282.
-
(1990)
Am. J. Med.
, vol.89
, pp. 282
-
-
Graybill, J.R.1
Stevens, D.A.2
Galgiani, J.N.3
Dismukes, W.E.4
Cloud, G.A.5
-
13
-
-
84855243121
-
GuiTope: an application for mapping random-sequence peptides to protein sequences
-
Halperin R.F., Stafford P., Emery J.S., Navalkar K.A., Johnston S.A. GuiTope: an application for mapping random-sequence peptides to protein sequences. BMC Bioinforma. 2012, 13.
-
(2012)
BMC Bioinforma.
, vol.13
-
-
Halperin, R.F.1
Stafford, P.2
Emery, J.S.3
Navalkar, K.A.4
Johnston, S.A.5
-
14
-
-
84861468049
-
MimoDB 2.0: a mimotope database and beyond
-
Huang J., Ru B., Zhu P., Nie F., Yang J., et al. MimoDB 2.0: a mimotope database and beyond. Nucleic Acids Res. 2012, 40:D271.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D271
-
-
Huang, J.1
Ru, B.2
Zhu, P.3
Nie, F.4
Yang, J.5
-
15
-
-
0346186980
-
Identification of a protective antigen of Coccidioides immitis by expression library immunization
-
Ivey F.D., Magee D.M., Woitaske M.D., Johnston S.A., Cox R.A. Identification of a protective antigen of Coccidioides immitis by expression library immunization. Vaccine 2003, 21:4359.
-
(2003)
Vaccine
, vol.21
, pp. 4359
-
-
Ivey, F.D.1
Magee, D.M.2
Woitaske, M.D.3
Johnston, S.A.4
Cox, R.A.5
-
16
-
-
67449086917
-
Extensive antibody cross-reactivity among infectious gram-negative bacteria revealed by proteome microarray analysis
-
Keasey S.L., Schmid K.E., Lee M.S., Meegan J., Tomas P., et al. Extensive antibody cross-reactivity among infectious gram-negative bacteria revealed by proteome microarray analysis. Mol. Cell. Proteomics 2009, 8:924.
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 924
-
-
Keasey, S.L.1
Schmid, K.E.2
Lee, M.S.3
Meegan, J.4
Tomas, P.5
-
17
-
-
84863516670
-
Structural analysis of B-cell epitopes in antibody:protein complexes
-
Kringelum J.V., Nielsen M., Padkjaer S.B., Lund O. Structural analysis of B-cell epitopes in antibody:protein complexes. Mol. Immunol. 2013, 53:24.
-
(2013)
Mol. Immunol.
, vol.53
, pp. 24
-
-
Kringelum, J.V.1
Nielsen, M.2
Padkjaer, S.B.3
Lund, O.4
-
18
-
-
33947501144
-
Diagnosis of coccidioidomycosis by antigen detection using cross-reaction with a histoplasma antigen
-
Kuberski T., Myers R., Wheat L.J., Durkin M., Connolly P., et al. Diagnosis of coccidioidomycosis by antigen detection using cross-reaction with a histoplasma antigen. Clin. Infect. Dis. 2007, 44:50.
-
(2007)
Clin. Infect. Dis.
, vol.44
, pp. 50
-
-
Kuberski, T.1
Myers, R.2
Wheat, L.J.3
Durkin, M.4
Connolly, P.5
-
19
-
-
77953025997
-
A general method for characterization of humoral immunity induced by a vaccine or infection
-
Legutki J.B., Magee D.M., Stafford P., Johnston S.A. A general method for characterization of humoral immunity induced by a vaccine or infection. Vaccine 2010, 28.
-
(2010)
Vaccine
, vol.28
-
-
Legutki, J.B.1
Magee, D.M.2
Stafford, P.3
Johnston, S.A.4
-
20
-
-
34547104630
-
Serological and molecular diagnosis of fungal infections
-
ASM Press, Washington, DC, USA, B.H. Detrick, R.G. Folds, D. James (Eds.)
-
Lindsley DWW, Mark D., Morrison Christine J. Serological and molecular diagnosis of fungal infections. Manual of Molecular and Clinical Laboratory Immunology 2006, 569. ASM Press, Washington, DC, USA. 7th ed. B.H. Detrick, R.G. Folds, D. James (Eds.).
-
(2006)
Manual of Molecular and Clinical Laboratory Immunology
, pp. 569
-
-
Lindsley, D.W.W.1
Mark, D.2
Morrison, C.J.3
-
21
-
-
78149275834
-
Serodiagnosis of Echinococcus spp. infection: explorative selection of diagnostic antigens by peptide microarray
-
List C., Qi W.H., Maag E., Gottstein B., Muller N., et al. Serodiagnosis of Echinococcus spp. infection: explorative selection of diagnostic antigens by peptide microarray. PLoS Negl. Trop. Dis. 2010, 4.
-
(2010)
PLoS Negl. Trop. Dis.
, vol.4
-
-
List, C.1
Qi, W.H.2
Maag, E.3
Gottstein, B.4
Muller, N.5
-
22
-
-
3242776203
-
Detection of galactomannan antigenemia by enzyme immunoassay for the diagnosis of invasive aspergillosis: variables that affect performance
-
Marr K.A., Balajee S.A., McLaughlin L., Tabouret M., Bentsen C., et al. Detection of galactomannan antigenemia by enzyme immunoassay for the diagnosis of invasive aspergillosis: variables that affect performance. J. Infect. Dis. 2004, 190:641.
-
(2004)
J. Infect. Dis.
, vol.190
, pp. 641
-
-
Marr, K.A.1
Balajee, S.A.2
McLaughlin, L.3
Tabouret, M.4
Bentsen, C.5
-
23
-
-
77957257351
-
Coccidioidal meningitis clinical presentation and management in the fluconazole era
-
Mathisen G., Shelub A., Truong J., Wigen C. Coccidioidal meningitis clinical presentation and management in the fluconazole era. Medicine 2010, 89:251.
-
(2010)
Medicine
, vol.89
, pp. 251
-
-
Mathisen, G.1
Shelub, A.2
Truong, J.3
Wigen, C.4
-
24
-
-
84906698523
-
Application of immunosignatures to diagnosis of Valley Fever
-
Navalkar K.A., Johnston S.A., Woodbury N., Galgiani J., Magee D.M., et al. Application of immunosignatures to diagnosis of Valley Fever. Clin. Vaccine Immunol. 2014, 10.1128/CVI.00228-14.
-
(2014)
Clin. Vaccine Immunol.
-
-
Navalkar, K.A.1
Johnston, S.A.2
Woodbury, N.3
Galgiani, J.4
Magee, D.M.5
-
25
-
-
85028146753
-
-
Center for Innovations in Medicine TBI, Arizona State University, Tempe, AZ, Center for Personalized Diagnostics TBI, Arizona State University, Tempe, AZ, Valley Fever Center for Excellence UoA, [manuscript in submission], A.Z. Tucson (Ed.)
-
Navalkar K.A., Johnston S.A., Stafford P., Galgiani J., Magee D.M. Application of Immunosignaturing to diagnosis of Valley Fever 2014, Center for Innovations in Medicine TBI, Arizona State University, Tempe, AZ, Center for Personalized Diagnostics TBI, Arizona State University, Tempe, AZ, Valley Fever Center for Excellence UoA, [manuscript in submission]. A.Z. Tucson (Ed.).
-
(2014)
Application of Immunosignaturing to diagnosis of Valley Fever
-
-
Navalkar, K.A.1
Johnston, S.A.2
Stafford, P.3
Galgiani, J.4
Magee, D.M.5
-
26
-
-
0029143283
-
Molecular and Biochemical-characterization of a Coccidioides immitis-specific antigen
-
Pan S.C., Cole G.T. Molecular and Biochemical-characterization of a Coccidioides immitis-specific antigen. Infect. Immun. 1995, 63:3994.
-
(1995)
Infect. Immun.
, vol.63
, pp. 3994
-
-
Pan, S.C.1
Cole, G.T.2
-
27
-
-
0027314207
-
Classification of protein sequences by their dipeptide composition
-
Petrilli P. Classification of protein sequences by their dipeptide composition. Comput. Appl. Biosci. 1993, 9:205.
-
(1993)
Comput. Appl. Biosci.
, vol.9
, pp. 205
-
-
Petrilli, P.1
-
28
-
-
85028174290
-
Revisiting the sensitivity of serologic testing in culture positive coccidioidomycosis
-
Polage C.R., Billetdeaux E., Litwin C.M., Petti C.A. Revisiting the sensitivity of serologic testing in culture positive coccidioidomycosis. Abstr. Gen. Meet. Am. Soc. Microbiol. 2006, 106:244.
-
(2006)
Abstr. Gen. Meet. Am. Soc. Microbiol.
, vol.106
, pp. 244
-
-
Polage, C.R.1
Billetdeaux, E.2
Litwin, C.M.3
Petti, C.A.4
-
29
-
-
80051532205
-
Application of immunosignatures to the assessment of Alzheimer's disease
-
Restrepo L., Stafford P., Magee D.M., Johnston S.A. Application of immunosignatures to the assessment of Alzheimer's disease. Ann. Neurol. 2011, 70:286.
-
(2011)
Ann. Neurol.
, vol.70
, pp. 286
-
-
Restrepo, L.1
Stafford, P.2
Magee, D.M.3
Johnston, S.A.4
-
30
-
-
85028137319
-
Coccidioidomycosis infectious disease
-
Humana Press Inc., Totowa, NJ. D. Hospenthal, M. Rinaldi (Eds.)
-
RH J, S B Coccidioidomycosis infectious disease. Diagnosis and Treatment of Human Mycoses 2008, 295. Humana Press Inc., Totowa, NJ. D. Hospenthal, M. Rinaldi (Eds.).
-
(2008)
Diagnosis and Treatment of Human Mycoses
, pp. 295
-
-
-
31
-
-
33846237249
-
Epidemiologic, clinical, and diagnostic aspects of coccidioidomycosis
-
Saubolle M.A., McKellar P.P., Sussland D. Epidemiologic, clinical, and diagnostic aspects of coccidioidomycosis. J. Clin. Microbiol. 2007, 45:26.
-
(2007)
J. Clin. Microbiol.
, vol.45
, pp. 26
-
-
Saubolle, M.A.1
McKellar, P.P.2
Sussland, D.3
-
32
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith T.F., Waterman M.S. Identification of common molecular subsequences. J. Mol. Biol. 1981, 147:195.
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 195
-
-
Smith, T.F.1
Waterman, M.S.2
-
33
-
-
0000752607
-
Pattern of 39,500 serologic tests in coccidioidomycosis
-
Smith C.E., Saito M.T., Simons S.A. Pattern of 39,500 serologic tests in coccidioidomycosis. JAMA 1956, 160:546.
-
(1956)
JAMA
, vol.160
, pp. 546
-
-
Smith, C.E.1
Saito, M.T.2
Simons, S.A.3
-
34
-
-
84859859148
-
Physical characterization of the "immunosignaturing effect"
-
Stafford P., Halperin R., Legutki J.B., Magee D.M., Galgiani J., et al. Physical characterization of the "immunosignaturing effect". Mol. Cell. Proteomics 2012, 11.
-
(2012)
Mol. Cell. Proteomics
, vol.11
-
-
Stafford, P.1
Halperin, R.2
Legutki, J.B.3
Magee, D.M.4
Galgiani, J.5
-
35
-
-
84860376334
-
Does difference exist between epitope and non-epitope residues? Analysis of the physicochemical and structural properties on conformational epitopes from B-cell protein antigens
-
Sun J., Xu T., Wang S., Li G., Wu D., et al. Does difference exist between epitope and non-epitope residues? Analysis of the physicochemical and structural properties on conformational epitopes from B-cell protein antigens. Immunome Res. 2011, 7.
-
(2011)
Immunome Res.
, vol.7
-
-
Sun, J.1
Xu, T.2
Wang, S.3
Li, G.4
Wu, D.5
-
37
-
-
80052257359
-
Early treatment with fluconazole may abrogate the development of IgG antibodies in coccidioidomycosis
-
Thompson G.R., Lunetta J.M., Johnson S.M., Taylor S., Bays D., et al. Early treatment with fluconazole may abrogate the development of IgG antibodies in coccidioidomycosis. Clin. Infect. Dis. 2011, 53:e20.
-
(2011)
Clin. Infect. Dis.
, vol.53
, pp. e20
-
-
Thompson, G.R.1
Lunetta, J.M.2
Johnson, S.M.3
Taylor, S.4
Bays, D.5
-
39
-
-
33746454738
-
-
Springer-Verlag, Berlin
-
Weihs C., Ligges U., Luebke K., Raabe N. klaR Analyzing German Business Cycles 2005, Springer-Verlag, Berlin.
-
(2005)
klaR Analyzing German Business Cycles
-
-
Weihs, C.1
Ligges, U.2
Luebke, K.3
Raabe, N.4
-
40
-
-
0030874046
-
Mapping of a Coccidioides immitis-specific epitope that reacts with complement-fixing antibody
-
Yang M.C., Magee D.M., Cox R.A. Mapping of a Coccidioides immitis-specific epitope that reacts with complement-fixing antibody. Infect. Immun. 1997, 65:4068.
-
(1997)
Infect. Immun.
, vol.65
, pp. 4068
-
-
Yang, M.C.1
Magee, D.M.2
Cox, R.A.3
-
41
-
-
0030759233
-
Identification of a Coccidioides immitis antigen 2 domain that expresses B-cell-reactive epitopes
-
Zhu Y.F., Tryon V., Magee D.M., Cox R.A. Identification of a Coccidioides immitis antigen 2 domain that expresses B-cell-reactive epitopes. Infect. Immun. 1997, 65:3376.
-
(1997)
Infect. Immun.
, vol.65
, pp. 3376
-
-
Zhu, Y.F.1
Tryon, V.2
Magee, D.M.3
Cox, R.A.4
|