Genomic characterization of a broiler reovirus field strain detected in Pennsylvania

Infection, Genetics and Evolution

Volumn 31, Issue , 2015, Pages 177-182

  Tang, Yi ^a   Lu, Huaguang ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

Broiler; Genotyping; Reovirus; RT PCR; Sequencing

Indexed keywords

ARTICLE; AVIAN ORTHOREOVIRUS; GENETIC HETEROGENEITY; GENETIC VARIABILITY; GENOME ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SPECIES COMPARISON; UNITED STATES; VIRUS DETECTION; VIRUS STRAIN; ANIMAL; CHICKEN; CLASSIFICATION; DNA SEQUENCE; GENETICS; GENOMICS; ISOLATION AND PURIFICATION; OPEN READING FRAME; UNTRANSLATED REGION; VIRUS GENOME;

AVES; AVIAN ORTHOREOVIRUS; ORTHOREOVIRUS;

UNTRANSLATED REGION;

ANIMALS; CHICKENS; GENOME, VIRAL; GENOMICS; OPEN READING FRAMES; ORTHOREOVIRUS, AVIAN; PENNSYLVANIA; SEQUENCE ANALYSIS, DNA; UNTRANSLATED REGIONS;

EID: 84922627008     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2015.01.029     Document Type: Article

References (45)

1. Attoui H., Biagini P., Stirling J., Mertens P.P., Cantaloube J.F., Meyer A., de Micco P., de Lamballerie X. Sequence characterization of Ndelle virus genome segments 1, 5, 7, 8, and 10: evidence for reassignment to the genus Orthoreovirus, family Reoviridae. Biochem. Biophys. Res. Commun. 2001, 287:583-588.
2. Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X. Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae). J. Gen. Virol. 2002, 83:1941-1951.
3. Attoui H., Mohd Jaafar F., Biagini P., Cantaloube J.F., de Micco P., Murphy F.A., de Lamballerie X. Genus Coltivirus (family Reoviridae): genomic and morphologic characterization of old world and new world viruses. Arch. Virol. 2002, 147:533-561.
4. Banyai K., Dandar E., Dorsey K.M., Mato T., Palya V. The genomic constellation of a novel avian orthoreovirus strain associated with runting-stunting syndrome in broilers. Virus Genes 2011, 42:82-89.
5. Baroni A., Bertoncin P., D'Aprile P.N., Felluga B. Ultrastructural histopathology of chick embryo chorioallantoic membrane infected with an avian reovirus. Avian Pathol. 1980, 9:341-354.
6. Benavente J., Martinez-Costas J. Avian reovirus: structure and biology. Virus Res. 2007, 123:105-119.
7. Bezerra D.A., da Silva R.R., Kaiano J.H., Silvestre R.V., de Souza Oliveira D., Linhares A.C., Gabbay Y.B., Mascarenhas J.D. Detection of avian group D rotavirus using the polymerase chain reaction for the VP6 gene. J. Virol. Methods 2012, 185:189-192.
8. Day J.M., Pantin-Jackwood M.J., Spackman E. Sequence and phylogenetic analysis of the S1 genome segment of turkey-origin reoviruses. Virus Genes 2007, 35:235-242.
9. De Gussem J., Swam H., Lievens K., De Herdt P. Reovirus tenosynovitis in a flock of layer breeders. Avian Pathol. 2010, 39:169-170.
10. Deshmukh D.R., Pomeroy B.S. Avian reoviruses II. Physicochemical characterization and classification. Avian Dis. 1969, 13:243-251.
11. Dobson K.N., Glisson J.R. Economic impact of a documented case of reovirus infection in broiler breeders. Avian Dis. 1992, 36:788-791.
12. Giangaspero M., Vanopdenbosch E., Nishikawa H., Tabbaa D. Prevalence of antibodies against respiratory viruses (parainfluenza virus type 3, respiratory syncytial virus, reovirus and adenovirus) in relation to productivity in Syrian Awassi sheep. Trop. Anim. Health Prod. 1997, 29:83-91.
13. Guy J.S., Levy M.G., Ley D.H., Barnes H.J., Gerig T.M. Experimental reproduction of enteritis in bobwhite quail (Colinus virginianus) with Cryptosporidium and reovirus. Avian Dis. 1987, 31:713-722.
14. Heggen-Peay C.L., Cheema M.A., Ali R.A., Schat K.A., Qureshi M.A. Interactions of poult enteritis and mortality syndrome-associated reovirus with various cell types in vitro. Poult. Sci. 2002, 81:1661-1667.
15. Howell S.H., Walker L.L. Synthesis of DNA in toluene-treated Chlamydomonas reinhardtii (DNA replication-chloroplast DNA-cell cycle-electron microscopy). Proc. Natl. Acad. Sci. U.S.A. 1972, 69:490-494.
16. Hsu H.W., Su H.Y., Huang P.H., Lee B.L., Liu H.J. Sequence and phylogenetic analysis of P10- and P17-encoding genes of avian reovirus. Avian Dis. 2005, 49:36-42.
17. Ide P.R., Dewitt W. Serological incidence of avian reovirus infection in broiler-breeders and progeny in Nova Scotia. Can. Vet. J. 1979, 20:348-353.
18. Johnson D.C. Diagnosis, pathology, and etiology of tenosynovitis in broilers and broiler breeders. Avian Dis. 1972, 16:1067-1072.
19. Kant A., Balk F., Born L., van Roozelaar D., Heijmans J., Gielkens A., ter Huurne A. Classification of Dutch and German avian reoviruses by sequencing the sigma C protein. Vet. Res. 2003, 34:203-212.
20. Magee D.L., Montgomery R.D., Maslin W.R., Wu C.C., Jack S.W. Reovirus associated with excessive mortality in young bobwhite quail. Avian Dis. 1993, 37:1130-1135.
21. Mertens P., Arella M., Attoui H., Belloncik S., Bergoin M., Boccardo G., Booth T., Chiu W., Diprose J., Duncan R. Family reoviridae. Virus Taxonomy 2000, 395-480.
22. Mohd Jaafar F., Goodwin A.E., Belhouchet M., Merry G., Fang Q., Cantaloube J.F., Biagini P., de Micco P., Mertens P.P., Attoui H. Complete characterisation of the American grass carp reovirus genome (genus Aquareovirus: family Reoviridae) reveals an evolutionary link between aquareoviruses and coltiviruses. Virology 2008, 373:310-321.
23. Mor S.K., Sharafeldin T.A., Porter R.E., Ziegler A., Patnayak D.P., Goyal S.M. Isolation and characterization of a turkey arthritis reovirus. Avian Dis. 2013, 57:97-103.
24. Nick H., Cursiefen D., Becht H. Structural and growth characteristics of two avian reoviruses. Arch. Virol. 1975, 48:261-269.
25. Olson N.O., Kerr K.M. Some characteristics of an avian arthritis viral agent. Avian Dis. 1966, 10:470-476.
26. Olson N.O., Shelton D.C., Munro D.A. Infectious synovitis control by medication; effect of strain differences and pleuropneumonia-like organisms. Am. J. Vet. Res. 1957, 18:735-739.
27. Palya V., Glavits R., Dobos-Kovacs M., Ivanics E., Nagy E., Banyai K., Reuter G., Szucs G., Dan A., Benko M. Reovirus identified as cause of disease in young geese. Avian Pathol. 2003, 32:129-138.
28. Petek M., D'Aprile P.N., Cancellotti F. Biological and physico-chemical properties of the infectious bursal disease virus (IBDV). Avian Pathol. 1973, 2:135-152.
29. Rey M.E., D'Andrea E., Calvert-Evers J., Paximadis M., Boccardo G. Evidence for a phytoreovirus associated with tobacco exhibiting leaf curl symptoms in South Africa. Phytopathology 1999, 89:303-307.
30. Ritter G.D., Ley D.H., Levy M., Guy J., Barnes H.J. Intestinal cryptosporidiosis and reovirus isolation from bobwhite quail (Colinus virginianus) with enteritis. Avian Dis. 1986, 30:603-608.
31. Rosenberger J.K., Sterner F.J., Botts S., Lee K.P., Margolin A. In vitro and in vivo characterization of avian reoviruses. I. Pathogenicity and antigenic relatedness of several avian reovirus isolates. Avian Dis. 1989, 33:535-544.
32. Sanchez-Cordon P.J., Hervas J., Chacon de Lara F., Jahn J., Salguero F.J., Gomez-Villamandos J.C. Reovirus infection in psittacine birds (Psittacus erithacus): morphologic and immunohistochemical study. Avian Dis. 2002, 46:485-492.
33. Sterner F.J., Rosenberger J.K., Margolin A., Ruff M.D. In vitro and in vivo characterization of avian reoviruses. II. Clinical evaluation of chickens infected with two avian reovirus pathotypes. Avian Dis. 1989, 33:545-554.
34. Su Y.P., Su B.S., Shien J.H., Liu H.J., Lee L.H. The sequence and phylogenetic analysis of avian reovirus genome segments M1, M2, and M3 encoding the minor core protein muA, the major outer capsid protein muB, and the nonstructural protein muNS. J. Virol. Methods 2006, 133:146-157.
35. Taber R., Alexander V., Whitford W. Persistent reovirus infection of CHO cells resulting in virus resistance. J. Virol. 1976, 17:513-524.
36. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
37. Thiel H., Collett M., Gould E., Heinz F., Houghton M., Meyers G., Purcell R., Rice C., Fauquet C., Mayo M. Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses 2005, Elsevier Academic Press, London.
38. van der Heide L. The history of avian reovirus. Avian Dis. 2000, 44:638-641.
39. Van der Heide L., Geissler J., Bryant E.S. Infectious tenosynovitis: serologic and histopathologic response after experimental infection with a Connecticut isolate. Avian Dis. 1974, 18:289-296.
40. Varela R., Benavente J. Protein coding assignment of avian reovirus strain S1133. J. Virol. 1994, 68:6775-6777.
41. Varela R., Martinez-Costas J., Mallo M., Benavente J. Intracellular posttranslational modifications of S1133 avian reovirus proteins. J. Virol. 1996, 70:2974-2981.
42. Vindevogel H., Meulemans G., Pastoret P.P., Schwers A., Calberg-Bacq C.M. Reovirus infection in the pigeon. Ann. Rech. Vet. 1982, 13:149-152.
43. Walker E.R., Friedman M.H., Olson N.O. Electron microscopic study of an avian reovirus that causes arthritis. J. Ultrastruct. Res. 1972, 41:67-79.
44. Watson R., Anthony F., Pickett M., Lambden P., Masson G.M., Thomas E.J. Reverse transcription with nested polymerase chain reaction shows expression of basic fibroblast growth factor transcripts in human granulosa and cumulus cells from in vitro fertilisation patients. Biochem. Biophys. Res. Commun. 1992, 187:1227-1231.
45. Xu W., Coombs K.M. Avian reovirus L2 genome segment sequences and predicted structure/function of the encoded RNA-dependent RNA polymerase protein. Virol. J. 2008, 5:153.