Chromatin immunoprecipitation protocol for mammalian cells

Methods in Molecular Biology

Volumn 1164, Issue , 2014, Pages 33-38

  Komata, Makiko ^a   Katou, Yuki ^a   Tanaka, Hiroshi ^a   Nakato, Ryuichiro ^a   Shirahige, Katsuhiko ^a   Bando, Masashige ^a  

^a NONE

Author keywords

ChIP seq; Chromatin immunoprecipitation; Mammalian cells; Next generation sequencer; Profile analysis; Protein localization

Indexed keywords

DNA; PROTEIN; CHROMATIN; CROSS LINKING REAGENT;

ARTICLE; CELL DISRUPTION; CENTRIFUGATION; CHROMATIN IMMUNOPRECIPITATION; CHROMOSOME STRUCTURE; DNA CROSS LINKING; DNA PURIFICATION; MAMMAL CELL; PRIORITY JOURNAL; PROTEIN CROSS LINKING; PROTEIN DNA INTERACTION; PROTEIN PROTEIN INTERACTION; ANIMAL; CHEMISTRY; CHROMATIN; HUMAN; ISOLATION AND PURIFICATION; METABOLISM; PROCEDURES;

ANIMALS; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; CROSS-LINKING REAGENTS; DNA; HUMANS;

EID: 84922482130     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-0805-9_4     Document Type: Article

References (4)

1. Park PJ (2009) ChIP-seq: advantages and challenges of a maturing technology. Nat Rev Genet 10: 669-680.
2. Nakato R et al (2013) DROMPA: easy-to-handle peak calling and visualization software for the computational analysis and validation of ChIPseq data. Genes Cells 18: 589-601.
3. Deardorff MA et al (2012) HDAC8 mutations in Cornelia de Lange syndrome affect the cohesin acetylation cycle. Nature 489: 313-317.
4. Kegel A et al (2011) Chromosome length influences replication-induced topological stress. Nature 471: 392-396.