-
1
-
-
0036085460
-
Cellular roles of DNA topoisomerases: A molecular perspective
-
DOI 10.1038/nrm831
-
Wang, J. C. Cellular roles of DNA topoisomerases: a molecular perspective. Nature Rev. Mol. Cell Biol. 3, 430-440 (2002). (Pubitemid 34685700)
-
(2002)
Nature Reviews Molecular Cell Biology
, vol.3
, Issue.6
, pp. 430-440
-
-
Wang, J.C.1
-
2
-
-
0035902590
-
Topological challenges to DNA replication: Conformations at the fork
-
DOI 10.1073/pnas.111006998
-
Postow, L., Crisona, N. J., Peter, B. J., Hardy, C. D. & Cozzarelli, N. R. Topological challenges to DNA replication: conformations at the fork. Proc. Natl Acad. Sci. USA 98, 8219-8226 (2001). (Pubitemid 32678016)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.15
, pp. 8219-8226
-
-
Postow, L.1
Crisona, N.J.2
Peter, B.J.3
Hardy, C.D.4
Cozzarelli, N.R.5
-
3
-
-
0028013488
-
Nature and distribution of chromosomal intertwinings in Saccharomyces cerevisiae
-
Spell, R. M. & Holm, C. Nature and distribution of chromosomal intertwinings in Saccharomyces cerevisiae. Mol. Cell. Biol. 14, 1465-1476 (1994).
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 1465-1476
-
-
Spell, R.M.1
Holm, C.2
-
4
-
-
9144257235
-
Assigning Function to Yeast Proteins by Integration of Technologies
-
DOI 10.1016/S1097-2765(03)00476-3
-
Hazbun, T. R. et al. Assigning function to yeast proteins by integration of technologies. Mol. Cell 12, 1353-1365 (2003). (Pubitemid 38037006)
-
(2003)
Molecular Cell
, vol.12
, Issue.6
, pp. 1353-1365
-
-
Hazbun, T.R.1
Malmstrom, L.2
Anderson, S.3
Graczyk, B.J.4
Fox, B.5
Riffle, M.6
Sundin, B.A.7
Aranda, J.D.8
McDonald, W.H.9
Chiu, C.-H.10
Snydsman, B.E.11
Bradley, P.12
Muller, E.G.D.13
Fields, S.14
Baker, D.15
Yates Iii, J.R.16
Davis, T.N.17
-
5
-
-
33745217560
-
Chromosomal association of theSmc5/6 complex reveals that it functions in differently regulated pathways
-
Lindroos, H. B. et al. Chromosomal association of theSmc5/6 complex reveals that it functions in differently regulated pathways. Mol. Cell 22, 755-767 (2006).
-
(2006)
Mol. Cell
, vol.22
, pp. 755-767
-
-
Lindroos, H.B.1
-
6
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
DOI 10.1126/science.1141319
-
Johnson, D. S., Mortazavi, A., Myers, R. M. & Wold, B. Genome-wide mapping of in vivo protein-DNA interactions. Science 316, 1497-1502 (2007). (Pubitemid 46906620)
-
(2007)
Science
, vol.316
, Issue.5830
, pp. 1497-1502
-
-
Johnson, D.S.1
Mortazavi, A.2
Myers, R.M.3
Wold, B.4
-
7
-
-
34547626213
-
Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation
-
DOI 10.1101/gad.432107
-
Bermejo, R. et al. Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation. Genes Dev. 21, 1921-1936 (2007). (Pubitemid 47204931)
-
(2007)
Genes and Development
, vol.21
, Issue.15
, pp. 1921-1936
-
-
Bermejo, R.1
Doksani, Y.2
Capra, T.3
Katou, Y.-M.4
Tanaka, H.5
Shirahige, K.6
Foiani, M.7
-
8
-
-
0024338961
-
Function of DNA topoisomerases as replication. Swivels in saccharomyces cerevisiae
-
DOI 10.1016/0022-2836(89)90387-2
-
Kim, R. A. & Wang, J. C. Function of DNA topoisomerases as replication swivels in Saccharomyces cerevisiae. J. Mol. Biol. 208, 257-267 (1989). (Pubitemid 19199905)
-
(1989)
Journal of Molecular Biology
, vol.208
, Issue.2
, pp. 257-267
-
-
Kim, R.A.1
Wang, J.C.2
-
9
-
-
0027976667
-
Decatenating activity of Escherichia coli DNA gyrase and topoisomerases i and III during oriC and pBR322 DNA replication in vitro
-
Hiasa, H., DiGate, R. J. & Marians, K. J. Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro. J. Biol. Chem. 269, 2093-2099 (1994). (Pubitemid 24035419)
-
(1994)
Journal of Biological Chemistry
, vol.269
, Issue.3
, pp. 2093-2099
-
-
Hiasa, H.1
Digate, R.J.2
Marians, K.J.3
-
10
-
-
36249015877
-
The RecQ helicase-topoisomerase III-Rmi1 complex: A DNA structure-specific 'dissolvasome'?
-
DOI 10.1016/j.tibs.2007.09.009, PII S0968000407002435
-
Mankouri, H. W. & Hickson, I. D. The RecQ helicase-topoisomerase III-Rmi1 complex: a DNA structure-specific 'dissolvasome'? Trends Biochem. Sci. 32, 538-546 (2007). (Pubitemid 350123052)
-
(2007)
Trends in Biochemical Sciences
, vol.32
, Issue.12
, pp. 538-546
-
-
Mankouri, H.W.1
Hickson, I.D.2
-
11
-
-
0028033989
-
The yeast type i topoisomerase top3 interacts with Sgs1, a DNA helicase homolog: A potential eukaryotic reverse gyrase
-
Gangloff, S., McDonald, J. P., Bendixen, C., Arthur, L.& Rothstein, R. The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol. Cell. Biol. 14, 8391-8398 (1994). (Pubitemid 24373588)
-
(1994)
Molecular and Cellular Biology
, vol.14
, Issue.12
, pp. 8391-8398
-
-
Gangloff, S.1
McDonald, J.P.2
Bendixen, C.3
Arthur, L.4
Rothstein, R.5
-
12
-
-
0025821897
-
A group of interacting yeast DNA replication genes
-
Hennessy, K. M., Lee, A., Chen, E. & Botstein, D. A group of interacting yeast DNA replication genes. Genes Dev. 5, 958-969 (1991). (Pubitemid 21906010)
-
(1991)
Genes and Development
, vol.5
, Issue.6
, pp. 958-969
-
-
Hennessy, K.M.1
Lee, A.2
Chen, E.3
Botstein, D.4
-
13
-
-
0043066728
-
Yeast histone 2A serine 129 is essential for the efficient repair of checkpoint-blind DNA damage
-
DOI 10.1038/sj.embor.embor871
-
Redon, C. et al. Yeast histone 2A serine 129 is essential for the efficient repair of checkpoint-blind DNA damage. EMBO Rep. 4, 678-684 (2003). (Pubitemid 36974752)
-
(2003)
EMBO Reports
, vol.4
, Issue.7
, pp. 678-684
-
-
Redon, C.1
Pilch, D.R.2
Rogakou, E.P.3
Orr, A.H.4
Lowndes, N.F.5
Bonner, W.M.6
-
14
-
-
33745278845
-
Repair of Topoisomerase I-Mediated DNA Damage
-
DOI 10.1016/S0079-6603(06)81005-6, PII S0079660306810056, Progress in Nuclei Acid Research and Molecular Biology
-
Pommier, Y. et al. Repair of topoisomerase I-mediated DNA damage. Prog. Nucleic Acid Res. Mol. Biol. 81, 179-229 (2006). (Pubitemid 44767505)
-
(2006)
Progress in Nucleic Acid Research and Molecular Biology
, vol.81
, pp. 179-229
-
-
Pommier, Y.1
Barcelo, J.M.2
Rao, V.A.3
Sordet, O.4
Jobson, A.G.5
Thibaut, L.6
Miao, Z.7
Seiler, J.A.8
Zhang, H.9
Marchand, C.10
Agama, K.11
Nitiss, J.L.12
Redon, C.13
-
15
-
-
0027092752
-
Camptothecin inhibits both the cleavage and religation reactions of eukaryotic DNA topoisomerase i
-
DOI 10.1016/0022-2836(92)90310-G
-
Kjeldsen, E., Svejstrup, J. Q., Gromova, I. I., Alsner, J. & Westergaard, O. Camptothecin inhibits both the cleavage and religation reactions of eukaryotic DNA topoisomerase I. J. Mol. Biol. 228, 1025-1030 (1992). (Pubitemid 23018485)
-
(1992)
Journal of Molecular Biology
, vol.228
, Issue.4
, pp. 1025-1030
-
-
Kjeldsen, E.1
Svejstrup, J.Q.2
Gromova, I.I.3
Alsner, J.4
Westergaard, O.5
-
16
-
-
34447509295
-
Antitumour drugs impede DNA uncoiling by topoisomerase i
-
DOI 10.1038/nature05938, PII NATURE05938
-
Koster, D. A., Palle, K., Bot, E. S., Bjornsti, M. A. & Dekker, N. H. Antitumour drugs impede DNA uncoiling by topoisomerase I. Nature 448, 213-217 (2007). (Pubitemid 47067371)
-
(2007)
Nature
, vol.448
, Issue.7150
, pp. 213-217
-
-
Koster, D.A.1
Palle, K.2
Bot, E.S.M.3
Bjornsti, M.-A.4
Dekker, N.H.5
-
17
-
-
0033859660
-
Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins
-
Ciosk, R. et al. Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins. Mol. Cell 5, 243-254 (2000). (Pubitemid 30628083)
-
(2000)
Molecular Cell
, vol.5
, Issue.2
, pp. 243-254
-
-
Ciosk, R.1
Shirayama, M.2
Shevchenko, A.3
Tanaka, T.4
Toth, A.5
Shevchenko, A.6
Nasmyth, K.7
-
18
-
-
33845380338
-
Smc5/6 is required for repair at collapsed replication forks
-
DOI 10.1128/MCB.01335-06
-
Ampatzidou, E., Irmisch, A., O'Connell, M. J. & Murray, J. M.Smc5/6 is required for repair at collapsed replication forks. Mol. Cell. Biol. 26, 9387-9401 (2006). (Pubitemid 44904432)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.24
, pp. 9387-9401
-
-
Ampatzidou, E.1
Irmisch, A.2
O'Connell, M.J.3
Murray, J.M.4
-
19
-
-
33750437743
-
Ubc9- and Mms21-Mediated Sumoylation Counteracts Recombinogenic Events at Damaged Replication Forks
-
DOI 10.1016/j.cell.2006.08.050, PII S0092867406012785
-
Branzei, D. et al. Ubc9- and mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks. Cell 127, 509-522 (2006). (Pubitemid 44647424)
-
(2006)
Cell
, vol.127
, Issue.3
, pp. 509-522
-
-
Branzei, D.1
Sollier, J.2
Liberi, G.3
Zhao, X.4
Maeda, D.5
Seki, M.6
Enomoto, T.7
Ohta, K.8
Foiani, M.9
-
20
-
-
65249118311
-
The Saccharomyces cerevisiae Esc2 and Smc5-6 proteins promote sister chromatid junction-mediated intra-S repair
-
Sollier, J. et al. The Saccharomyces cerevisiae Esc2 and Smc5-6 proteins promote sister chromatid junction-mediated intra-S repair. Mol. Biol. Cell 20, 1671-1682 (2009).
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 1671-1682
-
-
Sollier, J.1
-
21
-
-
0037673941
-
DNA helicase Srs2 disrupts the Rad51 presynaptic filament
-
DOI 10.1038/nature01577
-
Krejci, L. et al. DNA helicase Srs2 disrupts the Rad51 presynaptic filament. Nature 423, 305-309 (2003). (Pubitemid 40852702)
-
(2003)
Nature
, vol.423
, Issue.6937
, pp. 305-309
-
-
Krejci, L.1
Van Komen, S.2
Li, Y.3
Villemain, J.4
Reddy, M.S.5
Klein, H.6
Ellenberger, T.7
Sung, P.8
-
22
-
-
0037673943
-
The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments
-
DOI 10.1038/nature01585
-
Veaute, X. et al. The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments. Nature 423, 309-312 (2003). (Pubitemid 40852703)
-
(2003)
Nature
, vol.423
, Issue.6937
, pp. 309-312
-
-
Veaute, X.1
Jeusset, J.2
Soustelle, C.3
Kowalczykowski, S.C.4
Le Cam, E.5
Fahre, F.6
-
23
-
-
0034119866
-
Homologous recombination is responsible for cell death in the absence of the Sgs1 and Srs2 helicases
-
DOI 10.1038/76055
-
Gangloff, S., Soustelle, C.& Fabre, F. Homologous recombination is responsible for cell death in the absence of the Sgs1 and Srs2 helicases. Nature Genet. 25, 192-194 (2000). (Pubitemid 30394991)
-
(2000)
Nature Genetics
, vol.25
, Issue.2
, pp. 192-194
-
-
Gangloff, S.1
Soustelle, C.2
Fabre, F.3
-
24
-
-
19944432787
-
Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase
-
DOI 10.1101/gad.322605
-
Liberi, G. et al. Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase. Genes Dev. 19, 339-350 (2005). (Pubitemid 40189297)
-
(2005)
Genes and Development
, vol.19
, Issue.3
, pp. 339-350
-
-
Liberi, G.1
Maffioletti, G.2
Lucca, C.3
Chiolo, I.4
Baryshnikova, A.5
Cotta-Ramusino, C.6
Lopes, M.7
Peliicioli, A.8
Haber, J.E.9
Foiani, M.10
-
25
-
-
0030030623
-
An essential role for the Cdc6 protein in forming the pre-replicative complexes of budding yeast
-
DOI 10.1038/379180a0
-
Cocker, J. H., Piatti, S., Santocanale, C., Nasmyth, K. & Diffley, J. F. An essential role for the Cdc6 protein in forming the pre-replicative complexes of budding yeast. Nature 379, 180-182 (1996). (Pubitemid 26020203)
-
(1996)
Nature
, vol.379
, Issue.6561
, pp. 180-182
-
-
Cocker, J.H.1
Piatti, S.2
Santocanale, C.3
Nasmyth, K.4
Diffley, J.F.X.5
-
26
-
-
0029583865
-
Isolation of yeast artificial chromosomes free of endogenous yeast chromosomes: Construction of alternate hosts with defined karyotypic alterations
-
DOI 10.1073/pnas.92.25.11706
-
Hamer, L., Johnston, M.&Green, E. D. Isolation of yeast artificial chromosomes free of endogenous yeast chromsomes: Construction of alternate hosts with defined karyotypic alterations. Proc. Natl Acad. Sci. USA 92, 11706-11710 (1995). (Pubitemid 26014182)
-
(1995)
Proceedings of the National Academy of Sciences of the United States of America
, vol.92
, Issue.25
, pp. 11706-11710
-
-
Hamer, L.1
Johnston, M.2
Green, E.D.3
-
27
-
-
3242880374
-
Cohesin relocation from sites of chromosomal loading to places of convergent transcription
-
DOI 10.1038/nature02742
-
Lengronne, A. et al. Cohesin relocation from sites of chromosomal loading to places of convergent transcription. Nature 430, 573-578 (2004). (Pubitemid 38998632)
-
(2004)
Nature
, vol.430
, Issue.6999
, pp. 573-578
-
-
Lengronne, A.1
Katou, Y.2
Mori, S.3
Yokabayashi, S.4
Kelly, G.P.5
Ito, T.6
Watanabe, Y.7
Shirahige, K.8
Uhlmann, F.9
-
28
-
-
44949208460
-
Topoisomerase II Inactivation Prevents the Completion of DNA Replication in Budding Yeast
-
DOI 10.1016/j.molcel.2008.04.019, PII S1097276508003031
-
Baxter, J. & Diffley, J. F. Topoisomerase II inactivation prevents the completion of DNA replication in budding yeast. Mol. Cell 30, 790-802 (2008). (Pubitemid 351815125)
-
(2008)
Molecular Cell
, vol.30
, Issue.6
, pp. 790-802
-
-
Baxter, J.1
Diffley, J.F.X.2
-
29
-
-
0023659131
-
The structure of sister minichromosomeDNAbefore anaphase in Saccharomyces cerevisiae
-
Koshland, D.& Hartwell, L. H. The structure of sister minichromosomeDNAbefore anaphase in Saccharomyces cerevisiae. Science 238, 1713-1716 (1987).
-
(1987)
Science
, vol.238
, pp. 1713-1716
-
-
Koshland, D.1
Hartwell, L.H.2
-
30
-
-
68949154413
-
Smc5-Smc6-dependent removal of cohesin from mitotic chromosomes
-
Outwin, E. A., Irmisch, A., Murray, J. M. & O'Connell, M. J. Smc5-Smc6-dependent removal of cohesin from mitotic chromosomes. Mol. Cell. Biol. 29, 4363-4375 (2009).
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 4363-4375
-
-
Outwin, E.A.1
Irmisch, A.2
Murray, J.M.3
O'Connell, M.J.4
-
31
-
-
33745199392
-
Genomic approach for the understanding of dynamic aspect of chromosome behavior
-
Katou, Y., Kaneshiro, K., Aburatani, H. & Shirahige, K. Genomic approach for the understanding of dynamic aspect of chromosome behavior. Methods Enzymol. 409, 389-410 (2006).
-
(2006)
Methods Enzymol.
, vol.409
, pp. 389-410
-
-
Katou, Y.1
Kaneshiro, K.2
Aburatani, H.3
Shirahige, K.4
-
32
-
-
0042865938
-
S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex
-
DOI 10.1038/nature01900
-
Katou, Y. et al. S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex. Nature 424, 1078-1083 (2003). (Pubitemid 37064311)
-
(2003)
Nature
, vol.424
, Issue.6952
, pp. 1078-1083
-
-
Katou, Y.1
Kanoh, Y.2
Bando, M.3
Noguchi, H.4
Tanaka, H.5
Ashikari, T.6
Sugimoto, K.7
Shirahige, K.8
-
33
-
-
77955483551
-
Characteristics of transcriptional activity in nonlinear dynamics of genetic regulatory networks
-
Rosenfeld, S. Characteristics of transcriptional activity in nonlinear dynamics of genetic regulatory networks. Gene Regul. Syst. Biol. 3, 159-179 (2009).
-
(2009)
Gene Regul. Syst. Biol.
, vol.3
, pp. 159-179
-
-
Rosenfeld, S.1
-
34
-
-
0029761435
-
1 defines a 'point of no return' after which Cdc6 synthesis cannot promote DNA replication in yeast
-
Piatti, S., Bohm, T., Cocker, J. H., Diffley, J. F. & Nasmyth, K. Activation of S-phasepromoting CDKs in late G1 defines a "point of no return" after which Cdc6 synthesis cannot promote DNA replication in yeast. Genes Dev. 10, 1516-1531 (1996). (Pubitemid 26260708)
-
(1996)
Genes and Development
, vol.10
, Issue.12
, pp. 1516-1531
-
-
Piatti, S.1
Bohm, T.2
Cocker, J.H.3
Diffley, J.F.X.4
Nasmyth, K.5
-
35
-
-
0035312721
-
+ yeast strains
-
Lengronne, A., Pasero, P., Bensimon, A. & Schwob, E. Monitoring S phase progression globally and locally using BrdU incorporation in TK1 yeast strains. Nucleic Acids Res. 29, 1433-1442 (2001). (Pubitemid 32288489)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.7
, pp. 1433-1442
-
-
Lengronne, A.1
Pasero, P.2
Bensimon, A.3
Schwob, E.4
-
36
-
-
0035954251
-
Sister chromatid cohesion is required for postreplicative double-strand break repair in Saccharomyces cerevisiae
-
DOI 10.1016/S0960-9822(01)00271-8
-
Sjögren, C.&Nasmyth, K. Sister chromatid cohesion is required for postreplicative double-strand break repair in Saccharomyces cerevisiae. Curr. Biol. 11, 991-995 (2001). (Pubitemid 32589193)
-
(2001)
Current Biology
, vol.11
, Issue.12
, pp. 991-995
-
-
Sjogren, C.1
Nasmyth, K.2
|