Characterization of cytokine expression induced by avian influenza virus infection with real-time RT-PCR

Methods in Molecular Biology

Volumn 1161, Issue , 2014, Pages 217-233

  Kapczynski, Darrell R ^a   Jiang, Hai Jun ^a   Kogut, Michael H ^a  

^a NONE

Author keywords

Avian influenza; Cytokines; Real time RT PCR; RNA extraction

Indexed keywords

ALPHA INTERFERON; BETA INTERFERON; GAMMA INTERFERON; GRANULOCYTE MACROPHAGE COLONY STIMULATING FACTOR; INTERFERON 13; INTERFERON 15; INTERLEUKIN 1; INTERLEUKIN 10; INTERLEUKIN 12P35; INTERLEUKIN 12P40; INTERLEUKIN 13; INTERLEUKIN 16; INTERLEUKIN 17; INTERLEUKIN 18; INTERLEUKIN 19; INTERLEUKIN 1BETA; INTERLEUKIN 21; INTERLEUKIN 22; INTERLEUKIN 26; INTERLEUKIN 3; INTERLEUKIN 4; INTERLEUKIN 5; INTERLEUKIN 6; INTERLEUKIN 7; INTERLEUKIN 8; RECOMBINANT CYTOKINE; TOLL LIKE RECEPTOR 1; TOLL LIKE RECEPTOR 2; TOLL LIKE RECEPTOR 3; UNCLASSIFIED DRUG; CYTOKINE; RNA;

ANAS PLATYRHYNCHOS; ANIMAL CELL; ANIMAL CELL CULTURE; ANIMAL TISSUE; ARTICLE; AVIAN INFLUENZA VIRUS; GENE EXPRESSION; GENE STRUCTURE; INFLUENZA; INNATE IMMUNITY; MELEAGRIS GALLOPAVO; NONHUMAN; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; RECOMBINANT DNA TECHNOLOGY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ISOLATION; TISSUE CULTURE; ANIMAL; BIRD; GENE EXPRESSION REGULATION; GENETICS; IMMUNOLOGY; INFLUENZA VIRUS A; ISOLATION AND PURIFICATION; PHYSIOLOGY; PROCEDURES; VIROLOGY;

ANIMALS; BIRDS; CYTOKINES; GENE EXPRESSION REGULATION; IMMUNITY, INNATE; INFLUENZA A VIRUS; REAL-TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA;

EID: 84922481152     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-0758-8_18     Document Type: Article

References (62)

1. Kogut MH, Rothwell L, Kaiser P (2003) Differential regulation of cytokine gene expression by avian heterophils during receptormediated phagocytosis of opsonized and nonopsonized Salmonella enteritidis. J Interferon Cytokine Res 23:319–327
2. Swaggerty CL, Kogut MH, Ferro PJ, Rothwell L, Pevzner IY, Kaiser P (2004) Differential cytokine mRNA expression in heterophils isolated from Salmonella-resistant and -susceptible chickens. Immunology 113:139–148
3. Kaiser P, Poh TY, Rothwell L, Avery S, Balu S, Pathania US, Hughes S, Goodchild M, Morrell S, Watson M, Bumstead N, Kaufman J, Young JR (2005) A genomic analysis of chicken cytokines and chemokines. J Interferon Cytokine Res 25:467–484
4. Rothwell L, Young JR, Zoorob R, Whittaker CA, Hesketh P, Archer A, Smith AL, Kaiser P (2004) Cloning and characterization of chicken IL-10 and its role in the immune response to Eimeria maxima. J Immunol 173:2675–2682
5. Balu S, Kaiser P (2003) Avian interleukin- 12beta (p40): cloning and characterization of the cDNA and gene. J Interferon Cytokine Res 23:699–707
6. Lillehoj HS, Min W, Choi KD, Babu US, Burnside J, Miyamoto T, Rosenthal BM, Lillehoj EP (2001) Molecular, cellular, and functional characterization of chicken cytokines homologous to mammalian IL-15 and IL-2. Vet Immunol Immunopathol 82:229–244
7. Min W, Lillehoj HS, Li G, Sohn EJ, Miyamoto T (2002) Development and characterization of monoclonal antibodies to chicken interleukin- 15. Vet Immunol Immunopathol 88:49–56
8. Min W, Lillehoj HS (2004) Identification and characterization of chicken interleukin-16 cDNA. Dev Comp Immunol 28:153–162
9. Sundick RS, Gill-Dixon C (1997) A cloned chicken lymphokine homologous to both mammalian IL-2 and IL-15. J Immunol 159:720–725
10. Kaiser P, Rothwell L, Goodchild M, Bumstead N (2004) The chicken proinflammatory cytokines interleukin-1beta and interleukin-6: differences in gene structure and genetic location compared with their mammalian orthologues. Anim Genet 35:169–175
11. Schneider K, Puehler F, Baeuerle D, Elvers S, Staeheli P, Kaspers B, Weining KC (2000) cDNA cloning of biologically active chicken interleukin-18. J Interferon Cytokine Res 20:879–883
12. Schneider K, Klaas R, Kaspers B, Staeheli P (2001) Chicken interleukin-6. cDNA structure and biological properties. Eur J Biochem 268:4200–4206
13. Weining KC, Sick C, Kaspers B, Staeheli P (1998) A chicken homolog of mammalian interleukin-1 beta: cDNA cloning and purification of active recombinant protein. Eur J Biochem 258:994–1000
14. Avery S, Rothwell L, Degen WD, Schijns VE, Young J, Kaufman J, Kaiser P (2004) Characterization of the first nonmammalian T2 cytokine gene cluster: the cluster contains functional single-copy genes for IL-3, IL-4, IL-13, and GM-CSF, a gene for IL-5 that appears to be a pseudogene, and a gene encoding another cytokine like transcript, KK34. J Interferon Cytokine Res 24:600–610
15. Digby MR, Lowenthal JW (1995) Cloning and expression of the chicken interferon-gamma gene. J Interferon Cytokine Res 15:939–945
16. Sekellick MJ, Ferrandino AF, Hopkins DA, Marcus PI (1994) Chicken interferon gene: cloning, expression, and analysis. J Interferon Res 14:71–79
17. Sick C, Schultz U, Staeheli P (1996) A family of genes coding for two serologically distinct chicken interferons. J Biol Chem 271:7635–7639
18. Kaiser P (2012) The long view: a bright past, a brighter future? Forty years of chicken immunology pre- and post-genome. Avian Pathol 41:511–518
19. Poh TY, Pease J, Young JR, Bumstead N, Kaiser P (2008) Re-evaluation of chicken CXCR1 determines the true gene structure: CXCLi1 (K60) and CXCLi2 (CAF/interleukin- 8) are ligands for this receptor. J Biol Chem 283:16408–16415
20. Hughes S, Poh TY, Bumstead N, Kaiser P (2007) Re-evaluation of the chicken MIP family of chemokines and their receptors suggests that CCL5 is the prototypic MIP family chemokine, and that different species have developed different repertoires of both the CC chemokines and their receptors. Dev Comp Immunol 31:72–86
21. Dalloul RA, Long JA, Zimin AV, Aslam L, Beal K, Le Blomberg A, Bouffard P, Burt DW, Crasta O, Crooijmans RP, Cooper K, Coulombe RA, De S, Delany ME, Dodgson JB, Dong JJ, Evans C, Frederickson KM, Flicek P, Florea L, Folkerts O, Groenen MA, Harkins TT, Herrero J, Hoffmann S, Megens HJ, Jiang A, de Jong P, Kaiser P, Kim H, Kim KW, Kim S, Langenberger D, Lee MK, Lee T, Mane S, Marcais G, Marz M, McElroy AP, Modise T, Nefedov M, Notredame C, Paton IR, Payne WS, Pertea G, Prickett D, Puiu D, Qioa D, Raineri E, Ruffier M, Salzberg SL, Schatz MC, Scheuring C, Schmidt CJ, Schroeder S, Searle SM, Smith EJ, Smith J, Sonstegard TS, Stadler PF, Tafer H, Tu ZJ, Van Tassell CP, Vilella AJ, Williams KP, Yorke JA, Zhang L, Zhang HB, Zhang X, Zhang Y, Reed KM (2010) Multiplatform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis. PLoS Biol 8:e1000475
22. Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y, Li J, Yi K, Feng H, Zhu P, Li B, Liu Q, Fairley S, Magor KE, Du Z, Hu X, Goodman L, Tafer H, Vignal A, Lee T, Kim KW, Sheng Z, An Y, Searle S, Herrero J, Groenen MA, Crooijmans RP, Faraut T, Cai Q, Webster RG, Aldridge JR, Warren WC, Bartschat S, Kehr S, Marz M, Stadler PF, Smith J, Kraus RH, Zhao Y, Ren L, Fei J, Morisson M, Kaiser P, Griffin DK, Rao M, Pitel F, Wang J, Li N (2013) The duck genome and transcriptome provide insight into an avian influenza virus reservoir species. Nat Genet 45:776–783
23. Mayne RK, Powell F, Else RW, Kaiser P, Hocking PM (2007) Foot pad dermatitis in growing turkeys is associated with cytokine and cellular changes indicative of an inflammatory immune response. Avian Pathol 36:453–459
24. Powell FL, Rothwell L, Clarkson MJ, Kaiser P (2009) The turkey, compared to the chicken, fails to mount an effective early immune response to Histomonas meleagridis in the gut. Parasite Immunol 31:312–327
25. Powell F, Rothwell L, Clarkson M, Kaiser P (2012) Development of reagents to study the turkey’s immune response: cloning and characterisation of two turkey cytokines, interleukin (IL)-10 and IL-13. Vet Immunol Immunopathol 147:97–103
26. Maughan MN, Dougherty LS, Preskenis LA, Ladman BS, Gelb J Jr, Spackman EV, Keeler CL Jr (2013) Transcriptional analysis of the innate immune response of ducks to different species-of-origin low pathogenic H7 avian influenza viruses. Virol J 10:94
27. Adams SC, Xing Z, Li J, Cardona CJ (2009) Immune-related gene expression in response to H11N9 low pathogenic avian influenza virus infection in chicken and Pekin duck peripheral blood mononuclear cells. Mol Immunol 46:1744–1749
28. Liniger M, Summerfield A, Zimmer G, McCullough KC, Ruggli N (2012) Chicken cells sense influenza A virus infection through MDA5 and CARDIF signaling involving LGP2. J Virol 86:705–717
29. Lee SH, Lillehoj HS, Jang SI, Hong YH, Min W, Lillehoj EP, Yancey RJ, Dominowski P (2010) Embryo vaccination of chickens using a novel adjuvant formulation stimulates protective immunity against Eimeria maxima infection. Vaccine 28:7774–7778
30. Hong YH, Lillehoj HS, Lee SH, Dalloul RA, Lillehoj EP (2006) Analysis of chicken cytokine and chemokine gene expression following Eimeria acervulina and Eimeria tenella infections. Vet Immunol Immunopathol 114:209–223
31. Liu H, Zhang M, Han H, Yuan J, Li Z (2010) Comparison of the expression of cytokine genes in the bursal tissues of the chickens following challenge with infectious bursal disease viruses of varying virulence. Virol J 7:364
32. Jiang H, Yang H, Kapczynski DR (2011) Chicken interferon alpha pretreatment reduces virus replication of pandemic H1N1 and H5N9 avian influenza viruses in lung cell cultures from different avian species. Virol J 8:447
33. Zhao FQ, Zhang ZW, Yao HD, Wang LL, Liu T, Yu XY, Li S, Xu SW (2013) Effects of cold stress on mRNA expression of immunoglobulin and cytokine in the small intestine of broilers. Res Vet Sci 95:146–155
34. Kano R, Konnai S, Onuma M, Ohashi K (2009) Cytokine profiles in chickens infected with virulent and avirulent Marek’s disease viruses: interferon-gamma is a key factor in the protection of Marek’s disease by vaccination. Microbiol Immunol 53:224–232
35. Hong YH, Lillehoj HS, Lillehoj EP, Lee SH (2006) Changes in immune-related gene expression and intestinal lymphocyte subpopulations following Eimeria maxima infection of chickens. Vet Immunol Immunopathol 114:259–272
36. St Paul M, Paolucci S, Sharif S (2013) Characterization of responses initiated by different Toll-like receptor 2 ligands in chicken spleen cells. Res Vet Sci 95(3):919–23
37. Brisbin JT, Gong J, Parvizi P, Sharif S (2010) Effects of lactobacilli on cytokine expression by chicken spleen and cecal tonsil cells. Clin Vaccine Immunol 17:1337–1343
38. Carballeda JM, Zoth SC, Gomez E, Gravisaco MJ, Berinstein A (2011) Activation of the immune response against infectious bursal disease virus after intramuscular inoculation of an intermediate strain. Immunobiology 216:1028–1033
39. Sumners LH, Cox CM, Kim S, Salevsky JE, Siegel PB, Dalloul RA (2012) Immunological responses to Clostridium perfringens alphatoxin in two genetically divergent lines of chickens as influenced by major histocompatibility complex genotype. Poult Sci 91:592–603
40. Kim S, Miska KB, McElroy AP, Jenkins MC, Fetterer RH, Cox CM, Stuard LH, Dalloul RA (2009) Molecular cloning and functional characterization of avian interleukin-19. Mol Immunol 47:476–484
41. Rothwell L, Hu T, Wu Z, Kaiser P (2012) Chicken interleukin-21 is costimulatory for T cells and blocks maturation of dendritic cells. Dev Comp Immunol 36:475–482
42. Kim S, Faris L, Cox CM, Sumners LH, Jenkins MC, Fetterer RH, Miska KB, Dalloul RA (2012) Molecular characterization and immunological roles of avian IL-22 and its soluble receptor IL-22 binding protein. Cytokine 60:815–827
43. Rajput IR, Hussain A, Li YL, Zhang X, Xu X, Mao YL, You DY, Li WF (2014) Saccharomyces boulardii and Bacillus subtilis B10 modulate TLRs mediated signaling to induce immunity by chicken bone marrow dendritic cells. J Cell Biochem 115(1):189–98
44. Vervelde L, Reemers SS, van Haarlem DA, Post J, Claassen E, Rebel JM, Jansen CA (2013) Chicken dendritic cells are susceptible to highly pathogenic avian influenza viruses which induce strong cytokine responses. Dev Comp Immunol 39:198–206
45. Chaung HC, Cheng LT, Hung LH, Tsai PC, Skountzou I, Wang B, Compans RW, Lien YY (2012) Salmonella flagellin enhances mucosal immunity of avian influenza vaccine in chickens. Vet Microbiol 157:69–77
46. Cornelissen JB, Post J, Peeters B, Vervelde L, Rebel JM (2012) Differential innate responses of chickens and ducks to low-pathogenic avian influenza. Avian Pathol 41:519–529
47. Jie H, Lian L, Qu LJ, Zheng JX, Hou ZC, Xu GY, Song JZ, Yang N (2013) Differential expression of Toll-like receptor genes in lymphoid tissues between Marek’s disease virusinfected and noninfected chickens. Poult Sci 92:645–654
48. Zhou Z, Wang Z, Cao L, Hu S, Zhang Z, Qin B, Guo Z, Nie K (2013) Upregulation of chicken TLR4, TLR15 and MyD88 in heterophils and monocyte-derived macrophages stimulated with Eimeria tenella in vitro. Exp Parasitol 133:427–433
49. Gibson MS, Salmon N, Bird S, Kaiser P, Fife M (2012) Identification, cloning and characterisation of interleukin-1F5 (IL-36RN) in the chicken. Dev Comp Immunol 38: 136–147
50. Adams S, Xing Z, Li J, Mendoza K, Perez D, Reed K, Cardona C (2013) The effect of avian influenza virus NS1 allele on virus replication and innate gene expression in avian cells. Mol Immunol 56:358–368
51. Gadde U, Chapman HD, Rathinam T, Erf GF (2011) Cellular immune responses, chemokine, and cytokine profiles in Turkey poults following infection with the intestinal parasite Eimeria adenoeides. Poult Sci 90:2243–2250
52. Shanmugasundaram R, Selvaraj RK (2012) Regulatory T cell properties of thymic CD4+CD25+ cells in turkeys. Poult Sci 91: 1833–1837
53. Cha RM, Khatri M, Mutnal M, Sharma JM (2011) Pathogenic and immunogenic responses in turkeys following in ovo exposure to avian metapneumovirus subtype C. Vet Immunol Immunopathol 140:30–36
54. Ramasamy KT, Reddy MR, Verma PC, Murugesan S (2012) Expression analysis of turkey (Meleagris gallopavo) toll-like receptors and molecular characterization of avian specific TLR15. Mol Biol Rep 39:8539–8549
55. Gopinath VP, Biswas M, Raj GD, Raja A, Kumanan AK, Elankumaran S (2011) Molecular cloning and tissue-specific expression of Toll-like receptor 5 gene from turkeys. Avian Dis 55:480–485
56. Gu CQ, Xie CQ, Hu XY, Zhang WP, Bi DR, Cheng GF (2012) Cytokine gene expression in the livers of ducklings infected with duck hepatitis virus-1 JX strain. Poult Sci 91:583–591
57. Liang QL, Luo J, Zhou K, Dong JX, He HX (2011) Immune-related gene expression in response to H5N1 avian influenza virus infection in chicken and duck embryonic fibroblasts. Mol Immunol 48:924–930
58. Volmer C, Soubies SM, Grenier B, Guerin JL, Volmer R (2011) Immune response in the duck intestine following infection with lowpathogenic avian influenza viruses or stimulation with a Toll-like receptor 7 agonist administered orally. J Gen Virol 92:534–543
59. Huang Z, Fang D, Lv P, Bian X, Ruan X, Yan Y, Zhou J (2012) Differential cellular immune responses between chickens and ducks to H9N2 avian influenza virus infection. Vet Immunol Immunopathol 150:169–180
60. Jiao PR, Wei LM, Cheng YQ, Yuan RY, Han F, Liang J, Liu WL, Ren T, Xin CA, Liao M (2012) Molecular cloning, characterization, and expression analysis of the Muscovy duck Toll-like receptor 3 (MdTLR3) gene. Poult Sci 91:2475–2481
61. Jia H, Li G, Li J, Tian Y, Wang D, Shen J, Tao Z, Xu J, Lu L (2012) Cloning, expression and bioinformatics analysis of the duck TLR 4 gene. Br Poult Sci 53:190–197
62. Barber MR, Aldridge JR Jr, Webster RG, Magor KE (2010) Association of RIG-I with innate immunity of ducks to influenza. Proc Natl Acad Sci U S A 107(13):5913–5918