Extraction of DNA by magnetic ionic liquids: Tunable solvents for rapid and selective DNA analysis

Analytical Chemistry

Volumn 87, Issue 3, 2015, Pages 1552-1559

  Clark, Kevin D ^a   Nacham, Omprakash ^a   Yu, Honglian ^a   Li, Tianhao ^a   Yamsek, Melissa M ^a   Ronning, Donald R ^a   Anderson, Jared L ^a  

^a UNIVERSITY OF TOLEDO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; EXTRACTION; IONIC LIQUIDS; NUCLEIC ACIDS; QUALITY CONTROL;

BACTERIAL CELL LYSATE; COMPETITIVE EXTRACTIONS; DNA SAMPLE PREPARATION; DOUBLE STRANDED DNA; EXTRACTION EFFICIENCIES; MAGNETIC IONIC LIQUIDS; NUCLEIC ACID ANALYSIS; TETRACHLOROFERRATE;

POLYMERASE CHAIN REACTION;

DNA; IONIC LIQUID; SOLVENT;

ANALYSIS; CHEMICAL PHENOMENA; CHEMISTRY; ESCHERICHIA COLI; ISOLATION AND PURIFICATION; MAGNET; MAGNETISM; PLASMID;

DNA; ESCHERICHIA COLI; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; IONIC LIQUIDS; MAGNETIC PHENOMENA; MAGNETS; PLASMIDS; SOLVENTS;

EID: 84922324355     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac504260t     Document Type: Article

References (41)

1. Gormally, E.; Caboux, E.; Vineis, P.; Hainaut, P. Mutat. Res. Rev. Mutat. Res. 2007, 635, 105-117
2. Juliano, R. L.; Ming, X.; Nakagawa, O. Acc. Chem. Res. 2012, 45, 1067-1076
3. Hofreiter, M.; Serre, D.; Poinar, H. N.; Kuch, M.; Pabo, S. Nat. Rev. Genet. 2001, 2, 353-359
4. Willerslev, E.; Cooper, A. Proc. R. Soc. B 2005, 272, 3-16
5. Bull, A. T.; Ward, A. C.; Goodfellow, M. Microbiol. Mol. Biol. Rev. 2000, 64, 573-606
6. Lehmann, U.; Kreipe, H. Methods 2001, 25, 409-418
7. Jarraud, S.; Mougel, C.; Thioulouse, J.; Lina, G.; Meugnier, H.; Forey, F.; Nesme, X.; Etienne, J.; Vandenesch, F. Infect. Immun. 2002, 70, 631-641
8. Monteiro, L.; Bonnemaison, D.; Vekris, A.; Petry, K. G.; Bonnet, J.; Vidal, R.; Cabrita, J.; Mégraud, F. J. Clin. Microbiol. 1997, 35, 995-998
9. Rogacs, A.; Marshall, L. A.; Santiago, J. G. J. Chromatogr. A 2014, 1335, 105-120
10. Alaeddini, R. Forensic Sci. Int.: Genet. 2012, 6, 297-305
11. Rossen, L.; Nørskov, P.; Holmstrøm, K.; Rasmussen, O. F. Int. J. Food Microbiol. 1992, 17, 37-45
12. Porebski, S.; Bailey, L. G.; Baum, B. Plant Mol. Biol. Rep. 1997, 15, 8-15
13. Tretyakova, N.; Goggin, M.; Sangaraju, D.; Janis, G. Chem. Res. Toxicol. 2012, 25, 2007-2035
14. Demeke, T.; Jenkins, G. R. Anal. Bioanal. Chem. 2010, 396, 1977-1990
15. Patel, R.; Kvach, J. T.; Mounts, P. J. Gen. Microbiol. 1986, 132, 541-551
16. Wen, J.; Guillo, C.; Ferrance, J. P.; Landers, J. P. Anal. Chem. 2006, 78, 1673-1681
17. Bernardo, G. D.; Gaudio, S. D.; Galderisi, U.; Cascino, A.; Cipollaro, M. Biotechnol. Prog. 2007, 23, 297-301
18. Tian, H.; Huhmer, A. F. R.; Landers, J. P. Anal. Biochem. 2000, 283, 175-191
19. Poeckh, T.; Lopez, S.; Fuller, A. O.; Solomon, M. J.; Larson, R. G. Anal. Biochem. 2008, 373, 253-262
20. Dauphin, L. A.; Stephens, K. W.; Eufinger, S. C.; Bowen, M. D. J. Appl. Microbiol. 2010, 108, 163-172
21. Price, C. W.; Leslie, D. C.; Landers, J. P. Lab Chip 2009, 9, 2484-2494
22. Cho, Y.-K.; Lee, J.-G.; Park, J.-M.; Lee, B.-S.; Lee, Y.; Ko, C. Lab Chip 2007, 7, 565-573
23. Fujita, K.; MacFarlane, D. R.; Forsyth, M. Chem. Commun. 2005, 4804-4806
24. Chandran, A.; Ghoshdastidar, D.; Senapati, S. J. Am. Chem. Soc. 2012, 134, 20330-20339
25. Wang, J.-H.; Cheng, D.-H.; Chen, X.-W.; Du, Z.; Fang, Z.-L. Anal. Chem. 2007, 79, 620-625
26. Li, T.; Joshi, M. D.; Ronning, D. R.; Anderson, J. L. J. Chromatogr. A 2013, 1272, 8-14
27. Leones, R.; Rodrigues, L. C.; Pawlicka, A.; Esperanca, J. M. S. S.; Silva, M. M. Electrochem. Commun. 2012, 22, 189-192
28. Vijayaraghavan, R.; Izgorodin, A.; Ganesh, V.; Surianarayanan, M.; MacFarlane, D. R. Angew. Chem.; Int. Ed. 2010, 49, 1631-1633
29. Frégeau, C. J.; De Moors, A. Forensic Sci. Int.: Genet. 2012, 6, 511-522
30. Bruno, J. G.; Kiel, J. L. BioTechniques 2002, 32 (178-180) 182-173
31. Hayashi, S.; Hamaguchi, H. O. Chem. Lett. 2004, 33, 1590-1591
32. Del Sesto, R. E.; McCleskey, T. M.; Burrell, A. K.; Baker, G. A.; Thompson, J. D.; Scott, B. L.; Wilkes, J. S.; Williams, P. Chem. Commun. 2008, 447-449
33. Mallick, B.; Balke, B.; Felser, C.; Mudring, A.-V. Angew. Chem.; Int. Ed. 2008, 47, 7635-7638
34. Deng, N.; Li, M.; Zhao, L.; Lu, C.; de Rooy, S. L.; Warner, I. M. J. Hazard. Mater. 2011, 192, 1350-1357
35. Nacham, O.; Clark, K. D.; Yu, H.; Anderson, J. L. Chem. Mater. 2015, 10.1021/cm504202v
36. Lee, S. H.; Ha, S. H.; Ha, S.-S.; Jin, H.-B.; You, C.-Y.; Koo, Y.-M. J. Appl. Phys. 2007, 101, 09J102-109J102-103
37. Brown, P.; Butts, C. P.; Eastoe, J.; Padron Hernandez, E.; Machado, F. L. d. A.; de Oliveira, R. J. Chem. Commun. 2013, 49, 2765-2767
38. Purohit, H. J.; Kapley, A.; Moharikar, A. A.; Narde, G. J. Microbiol. Methods 2003, 52, 315-323
39. Bai, J.; Baldwin, E.; Liao, H.-L.; Zhao, W.; Kostenyuk, I.; Burns, J.; Irey, M. J. Agric. Food Chem. 2013, 61, 9339-9346
40. Wang, H.; Wang, J.; Zhang, S. Phys. Chem. Chem. Phys. 2011, 13, 3906-3910
41. Pei, Y.; Wang, J.; Wu, K.; Xuan, X.; Lu, X. Sep. Purif. Technol. 2009, 64, 288-295