Genome-wide profiling of untranslated regions by paired-end ditag sequencing reveals unexpected transcriptome complexity in yeast

Molecular Genetics and Genomics

Volumn 290, Issue 1, 2015, Pages 217-224

  Kang, Ya Ni ^a   Lai, Deng Pan ^b   Ooi, Hong Sain ^c   Shen, Ting ting ^b   Kou, Yao ^d   Tian, Jing ^d   Czajkowsky, Daniel M ^a   Shao, Zhifeng ^a   Zhao, Xiaodong ^a  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

^b Shanghai Jiao Tong University   (China)

^c BIOINFORMATICS INSTITUTE   (Singapore)

^d NORTHWEST UNIVERSITY   (China)

Author keywords

Budding yeast; PET sequencing; Transcriptome; Untranslated region

Indexed keywords

FUNGAL RNA; SPACER DNA; TRANSCRIPTOME; 3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; MESSENGER RNA; UNTRANSLATED REGION;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; FUNGAL GENOME; FUNGAL STRAIN; GENE EXPRESSION PROFILING; GENE ONTOLOGY; NONHUMAN; OPEN READING FRAME; PAIRED END DITAG; POLYADENYLATION; PRIORITY JOURNAL; RNA EXTRACTION; SEQUENCE ANALYSIS; TRANSCRIPTION INITIATION SITE; UNTRANSLATED REGION; YEAST; AMINO ACID SEQUENCE; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR GENETICS; PROCEDURES; SACCHAROMYCES CEREVISIAE;

SACCHAROMYCETALES;

3' UNTRANSLATED REGIONS; 5' UNTRANSLATED REGIONS; AMINO ACID SEQUENCE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; GENOME, FUNGAL; MOLECULAR SEQUENCE DATA; RNA, MESSENGER; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION INITIATION SITE; TRANSCRIPTOME; UNTRANSLATED REGIONS;

EID: 84922170723     PISSN: 16174615     EISSN: 16174623     Source Type: Journal    
DOI: 10.1007/s00438-014-0913-6     Document Type: Article

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