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Volumn 14, Issue 2, 2015, Pages 418-429

Protectome analysis: A new selective bioinformatics tool for bacterial vaccine candidate discovery

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ANTIGEN; BACTERIAL VACCINE; MENINGOCOCCUS VACCINE; 5' NUCLEOTIDASE; BACTERIAL PROTEIN; PROTEOME; SIGNAL PEPTIDE;

EID: 84921908250     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M114.039362     Document Type: Article
Times cited : (24)

References (31)
  • 3
    • 21644481459 scopus 로고    scopus 로고
    • Identification of a universal Group B streptococcus vaccine by multiple genome screen
    • Maione, D., Margarit, I., Rinaudo, C. D., Masignani, V., Mora, M., et al. (2005) Identification of a universal Group B streptococcus vaccine by multiple genome screen. Science 309, 148-150
    • (2005) Science , vol.309 , pp. 148-150
    • Maione, D.1    Margarit, I.2    Rinaudo, C.D.3    Masignani, V.4    Mora, M.5
  • 5
    • 84861133426 scopus 로고    scopus 로고
    • The new multicomponent vaccine against meningococcal serogroup B, 4CMenB: Immunological, functional, and structural characterization of the antigens
    • Serruto, D., Bottomley, M. J., Ram, S., Giuliani, M. M., and Rappuoli, R. (2012) The new multicomponent vaccine against meningococcal serogroup B, 4CMenB: immunological, functional, and structural characterization of the antigens. Vaccine 30, B87-B97
    • (2012) Vaccine , vol.30 , pp. B87-B97
    • Serruto, D.1    Bottomley, M.J.2    Ram, S.3    Giuliani, M.M.4    Rappuoli, R.5
  • 6
    • 78649352578 scopus 로고    scopus 로고
    • Bacterial vaccine discovery: From "brute force" to high selectivity
    • Grandi, G. (2010) Bacterial vaccine discovery: from "brute force" to high selectivity. Hum. Vaccin. 6, 872-875
    • (2010) Hum. Vaccin , vol.6 , pp. 872-875
    • Grandi, G.1
  • 8
    • 71049163771 scopus 로고    scopus 로고
    • Surfome analysis as a fast track to vaccine discovery: Identification of a novel protective antigen for Group B Streptococcus hypervirulent strain COH1
    • Doro, F., Liberatori, S., Rodríguez-Ortega, M. J., Rinaudo, C. D., Rosini, R., et al. (2009) Surfome analysis as a fast track to vaccine discovery: identification of a novel protective antigen for Group B Streptococcus hypervirulent strain COH1. Mol. Cell. Proteomics 8, 1728-1737
    • (2009) Mol. Cell. Proteomics , vol.8 , pp. 1728-1737
    • Doro, F.1    Liberatori, S.2    Rodríguez-Ortega, M.J.3    Rinaudo, C.D.4    Rosini, R.5
  • 10
    • 33847031827 scopus 로고    scopus 로고
    • VaxiJen: A server for prediction of protective antigens, tumor antigens, and subunit vaccines
    • Doytchinova, I. A., and Flower, D. R. (2007) VaxiJen: a server for prediction of protective antigens, tumor antigens, and subunit vaccines. BMC Bioinformatics 8, 4
    • (2007) BMC Bioinformatics , vol.8 , pp. 4
    • Doytchinova, I.A.1    Flower, D.R.2
  • 11
    • 84891783174 scopus 로고    scopus 로고
    • Activities at the Universal Protein Resource (UniProt)
    • UniProt Consortium. Activities at the Universal Protein Resource (UniProt) (2014) Nucleic Acids Res. 42, D191-D198
    • (2014) Nucleic Acids Res , vol.42 , pp. D191-D198
    • UniProt Consortium1
  • 14
    • 84862221167 scopus 로고    scopus 로고
    • SMART 7: Recent updates to the protein domain annotation resource
    • Letunic, I., Doerks, T., and Bork, P. (2012) SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res. 40, D302-D305
    • (2012) Nucleic Acids Res , vol.40 , pp. D302-D305
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 15
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice. Nucleic Acids Res. 22, 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 16
    • 0034647416 scopus 로고    scopus 로고
    • Accurate formula for P-values of gapped local sequence and profile alignments
    • Mott, R. (2000) Accurate formula for P-values of gapped local sequence and profile alignments. J. Mol. Biol. 300, 649-659
    • (2000) J. Mol. Biol , vol.300 , pp. 649-659
    • Mott, R.1
  • 17
    • 84934438590 scopus 로고    scopus 로고
    • The Polymerase Incomplete Primer Extension (PIPE) method applied to high-throughput cloning and site-directed mutagenesis
    • Heath, K., and Scott, L. (2009) The Polymerase Incomplete Primer Extension (PIPE) method applied to high-throughput cloning and site-directed mutagenesis. Methods Mol. Biol. 498, 91-103
    • (2009) Methods Mol. Biol , vol.498 , pp. 91-103
    • Heath, K.1    Scott, L.2
  • 19
    • 38549089606 scopus 로고    scopus 로고
    • VIOLIN: Vaccine investigation and online information network
    • Xiang, Z., Todd, T., Ku, K. P., Kovacic, B. L., Larson, C. B., et al. (2008) VIOLIN: vaccine investigation and online information network. Nucleic Acids Res. 36, D923-D928
    • (2008) Nucleic Acids Res , vol.36 , pp. D923-D928
    • Xiang, Z.1    Todd, T.2    Ku, K.P.3    Kovacic, B.L.4    Larson, C.B.5
  • 20
    • 70349323594 scopus 로고    scopus 로고
    • Capturing host-pathogen interactions by protein microarrays: Identification of novel streptococcal proteins binding to human fibronectin, fibrinogen, and C4BP
    • Margarit, I., Bonacci, S., Pietrocola, G., Rindi, S., Ghezzo, C., et al. (2009) Capturing host-pathogen interactions by protein microarrays: identification of novel streptococcal proteins binding to human fibronectin, fibrinogen, and C4BP. FASEB J. 23, 3100-3112
    • (2009) FASEB J , vol.23 , pp. 3100-3112
    • Margarit, I.1    Bonacci, S.2    Pietrocola, G.3    Rindi, S.4    Ghezzo, C.5
  • 22
    • 79960425958 scopus 로고    scopus 로고
    • The cell surface proteome of Staphylococcus aureus
    • Dreisbach, A., van Dijl, J. M., and Buist, G. (2011) The cell surface proteome of Staphylococcus aureus. Proteomics 11, 3154-3168
    • (2011) Proteomics , vol.11 , pp. 3154-3168
    • Dreisbach, A.1    Van Dijl, J.M.2    Buist, G.3
  • 23
    • 77952372626 scopus 로고    scopus 로고
    • Improved accuracy of cell surface shaving proteomics in Staphylococcus aureus using a falsepositive control
    • Solis, N., Larsen, M. R., and Cordwell, S. J. (2010) Improved accuracy of cell surface shaving proteomics in Staphylococcus aureus using a falsepositive control. Proteomics 10, 2037-2049
    • (2010) Proteomics , vol.10 , pp. 2037-2049
    • Solis, N.1    Larsen, M.R.2    Cordwell, S.J.3
  • 24
  • 26
    • 14844325687 scopus 로고    scopus 로고
    • Antigenome technology: A novel approach for the selection of bacterial vaccine candidate antigens
    • Meinke, A., Henics, T., Hanner, M., Minh, D. B., and Nagy, E. (2005) Antigenome technology: a novel approach for the selection of bacterial vaccine candidate antigens. Vaccine 23, 2035-2041
    • (2005) Vaccine , vol.23 , pp. 2035-2041
    • Meinke, A.1    Henics, T.2    Hanner, M.3    Minh, D.B.4    Nagy, E.5
  • 27
    • 67651246833 scopus 로고    scopus 로고
    • Protein array profiling of tic patient sera reveals a broad range and enhanced immune response against Group A Streptococcus antigens
    • Bombaci, M., Grifantini, R., Mora, M., Reguzzi, V., Petracca, R., et al. (2009) Protein array profiling of tic patient sera reveals a broad range and enhanced immune response against Group A Streptococcus antigens. PLoS One 4, e6332
    • (2009) PLoS One , vol.4 , pp. e6332
    • Bombaci, M.1    Grifantini, R.2    Mora, M.3    Reguzzi, V.4    Petracca, R.5
  • 30
    • 84861120227 scopus 로고    scopus 로고
    • Meningococcal vaccine development-from glycoconjugates against MenACWY to proteins against MenB-potential for broad protection against meningococcal disease
    • Dull, P. M., and McIntosh, E. D. (2012) Meningococcal vaccine development-from glycoconjugates against MenACWY to proteins against MenB-potential for broad protection against meningococcal disease. Vaccine 30, B18-B25
    • (2012) Vaccine , vol.30 , pp. B18-B25
    • Dull, P.M.1    McIntosh, E.D.2
  • 31
    • 84882966246 scopus 로고    scopus 로고
    • Preventing the broad spectrum of perinatal morbidity and mortality through group B streptococcal vaccination
    • Edwards, M. S., and Gonik, B. (2013) Preventing the broad spectrum of perinatal morbidity and mortality through group B streptococcal vaccination. Vaccine 31, D66-D71
    • (2013) Vaccine , vol.31 , pp. D66-D71
    • Edwards, M.S.1    Gonik, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.