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Volumn 1262, Issue , 2015, Pages 199-213

In situ dissection of RNA functional subunits by domain-specific chromatin isolation by RNA purification (dChIRP)

Author keywords

ChIRP; Chromatin; Long noncoding RNA; RNA; RNA domains; RNA binding protein

Indexed keywords

BIOMATERIAL; DNA; PROTEIN; RNA; CHROMATIN; DROSOPHILA PROTEIN; LONG UNTRANSLATED RNA; ROX1 PROTEIN, DROSOPHILA; TRANSCRIPTION FACTOR;

EID: 84921789954     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2253-6_12     Document Type: Article
Times cited : (18)

References (13)
  • 1
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn JL, Chang HY (2012) Genome regulation by long noncoding RNAs. Annu Rev Biochem 81:145–166
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 3
    • 84857066786 scopus 로고    scopus 로고
    • Modular regulatory principles of large non-coding RNAs
    • Guttman M, Rinn JL (2012) Modular regulatory principles of large non-coding RNAs. Nature 482:339–346
    • (2012) Nature , vol.482 , pp. 339-346
    • Guttman, M.1    Rinn, J.L.2
  • 4
    • 27944508215 scopus 로고    scopus 로고
    • CLIP: A method for identifying protein-RNA interaction sites in living cells
    • Ule J, Jensen K, Mele A, Darnell RB (2005) CLIP: a method for identifying protein-RNA interaction sites in living cells. Methods 37: 376–386
    • (2005) Methods , vol.37 , pp. 376-386
    • Ule, J.1    Jensen, K.2    Mele, A.3    Darnell, R.B.4
  • 5
    • 84876935138 scopus 로고    scopus 로고
    • Mapping the human miRNA interactome by CLASH reveals frequent non-canonical binding
    • Helwak A, Kudla G, Dudnakova T, Tollervey D (2013) Mapping the human miRNA interactome by CLASH reveals frequent non-canonical binding. Cell 153:654–665
    • (2013) Cell , vol.153 , pp. 654-665
    • Helwak, A.1    Kudla, G.2    Dudnakova, T.3    Tollervey, D.4
  • 6
    • 80054756754 scopus 로고    scopus 로고
    • Genomic maps of long noncoding RNA occupancy reveal principles of RNAchromatin interactions
    • Chu C, Zhong FL, Artandi SE, Chang HY (2011) Genomic maps of long noncoding RNA occupancy reveal principles of RNAchromatin interactions. Mol Cell 44:1–12
    • (2011) Mol Cell , vol.44 , pp. 1-12
    • Chu, C.1    Zhong, F.L.2    Artandi, S.E.3    Chang, H.Y.4
  • 7
    • 84863741439 scopus 로고    scopus 로고
    • Chromatin isolation by RNA purification (ChIRP)
    • Chu C, Quinn JJ, Chang HY (2012) Chromatin isolation by RNA purification (ChIRP). J Vis Exp 61:e3912
    • (2012) J Vis Exp , vol.61 , pp. 3912
    • Chu, C.1    Quinn, J.J.2    Chang, H.Y.3
  • 10
    • 84906322449 scopus 로고    scopus 로고
    • Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification
    • Quinn JJ, Ilik IA, Qu K, Georgiev P, Chu C, Ahktar A, Chang HY (2014) Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification. Nat Biotechnol. doi: 10.1038/nbt.2943
    • (2014) Nat Biotechnol
    • Quinn, J.J.1    Ilik, I.A.2    Qu, K.3    Georgiev, P.4    Chu, C.5    Ahktar, A.6    Chang, H.Y.7
  • 11
    • 84855940430 scopus 로고    scopus 로고
    • Dosage compensation in Drosophila melanogaster: Epigenetic fine-tuning of chromosome-wide transcription
    • Conrad T, Akhtar A (2012) Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription. Nat Rev Genet 13:123–134
    • (2012) Nat Rev Genet , vol.13 , pp. 123-134
    • Conrad, T.1    Akhtar, A.2
  • 12
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Bailey TL, Elkan C (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 2:28–36
    • (1994) Proc Int Conf Intell Syst Mol Biol , vol.2 , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.