SEC16 in COPII coat dynamics at ER exit sites

Biochemical Society Transactions

Volumn 43, Issue , 2015, Pages 97-103

  Sprangers, Joep ^a   Rabouille, Catherine ^a,b  

^a UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^b Department of Cell Biology UMCU Utrecht ^*  (Netherlands)

Author keywords

Coat; COPII; ER exit site; Nutrient; Protein transport through the secretory pathway; Sec16; Signalling

Indexed keywords

CARRIER PROTEIN; COAT PROTEIN COMPLEX II; GUANOSINE TRIPHOSPHATE; MEMBRANE PROTEIN; MITOGEN ACTIVATED PROTEIN KINASE 1; MITOGEN ACTIVATED PROTEIN KINASE 3; PROTEIN SAR1; PROTEIN SEC16; SCAFFOLD PROTEIN; UNCLASSIFIED DRUG; SACCHAROMYCES CEREVISIAE PROTEIN; SEC16 PROTEIN, S CEREVISIAE; VESICULAR TRANSPORT PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; AUTOPHAGOSOME; AUTOPHAGY; ENDOPLASMIC RETICULUM; ENDOPLASMIC RETICULUM EXIT SITE; ENDOPLASMIC RETICULUM MEMBRANE; HYDROLYSIS; INTRACELLULAR SIGNALING; INTRACELLULAR TRANSPORT; MOLECULAR DYNAMICS; MOLECULAR MODEL; OLIGOMERIZATION; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN TRANSPORT; SECRETORY PATHWAY; ANIMAL; CHEMISTRY; COATED VESICLE; HUMAN; METABOLISM; PHYSIOLOGY; PROTEIN TERTIARY STRUCTURE; SIGNAL TRANSDUCTION;

ANIMALS; COP-COATED VESICLES; ENDOPLASMIC RETICULUM; HUMANS; MEMBRANE PROTEINS; PROTEIN STRUCTURE, TERTIARY; PROTEIN TRANSPORT; SACCHAROMYCES CEREVISIAE PROTEINS; SIGNAL TRANSDUCTION; VESICULAR TRANSPORT PROTEINS;

EID: 84921755554     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST20140283     Document Type: Article

References (47)

1. Sharpe, H.J., Stevens, T.J. and Munro, S. (2010) A comprehensive comparison of transmembrane domains reveals organelle-specific properties. Cell 142, 158-169 CrossRef PubMed
2. Bannykh, S.I., Rowe, T. and Balch, W.E. (1996) The organization of endoplasmic reticulum export complexes. J. Cell Biol. 135, 19-35 CrossRef PubMed
3. Lee, M.C., Miller, E.A., Goldberg, J., Orci, L. and Schekman, R. (2004) Bi-directional protein transport between the ER and Golgi. Annu. Rev. Cell Dev. Biol. 20, 87-123 CrossRef PubMed
4. Miller, E.A. and Barlowe, C. (2010) Regulation of coat assembly: sorting things out at the ER. Curr. Opin. Cell Biol. 22, 447-453 CrossRef PubMed
5. Yoshihisa, T., Barlowe, C. and Schekman, R. (1993) Requirement for a GTPase-activating protein in vesicle budding from the endoplasmic reticulum. Science 259, 1466-1468 CrossRef PubMed
6. Matsuoka, K., Orci, L., Amherdt, M., Bednarek, S.Y., Hamamoto, S., Schekman, R. and Yeung, T. (1998) COPII-coated vesicle formation reconstituted with purified coat proteins and chemically defined liposomes. Cell 93, 263-275 CrossRef PubMed
7. Supek, F., Madden, D.T., Hamamoto, S., Orci, L. and Schekman, R. (2002) Sec16p potentiates the action of COPII proteins to bud transport vesicles. J. Cell Biol. 158, 1029-1038 CrossRef PubMed
8. Novick, P., Field, C. and Schekman, R. (1980) Identification of 23 complementation groups required for post-translational events in the yeast secretory pathway. Cell 21, 205-215 CrossRef PubMed
9. Kaiser, C.A. and Schekman, R. (1990) Distinct sets of SEC genes govern transport vesicle formation and fusion early in the secretory pathway. Cell 61, 723-733 CrossRef PubMed
10. Neumann, N., Lundin, D. and Poole, A.M. (2010) Comparative genomic evidence for a complete nuclear pore complex in the last eukaryotic common ancestor. PLoS ONE 5, e13241 CrossRef PubMed
11. Connerly, P.L., Esaki, M., Montegna, E.A., Strongin, D.E., Levi, S., Soderholm, J. and Glick, B.S. (2005) Sec16 is a determinant of transitional ER organization. Curr. Biol. 15, 1439-1447 CrossRef PubMed
12. Witte, K., Schuh, A.L., Hegermann, J., Sarkeshik, A., Mayers, J.R., Schwarze, K., Yates, 3rd, J.R., Eimer, S. and Audhya, A. (2011) TFG-1 function in protein secretion and oncogenesis. Nat. Cell Biol. 13, 550-558 CrossRef PubMed
13. Sealey-Cardona, M., Schmidt, K., Demmel, L., Hirschmugl, T., Gesell, T., Dong, G. and Warren, G. (2014) Sec16 determines the size and functioning of the Golgi in the protist parasite, Trypanosoma brucei. Traffic 15, 613-629 CrossRef PubMed
14. Ivan, V., de Voer, G., Xanthakis, D., Spoorendonk, K.M., Kondylis, V. and Rabouille, C. (2008) Drosophila Sec16 mediates the biogenesis of tER sites upstream of Sar1 through an arginine-rich motif. Mol. Biol. Cell 19, 4352-4365 CrossRef PubMed
15. Bhattacharyya, D. and Glick, B.S. (2007) Two mammalian Sec16 homologues have nonredundant functions in endoplasmic reticulum (ER) export and transitional ER organization. Mol. Biol. Cell 18, 839-849 CrossRef PubMed
16. Hughes, H., Budnik, A., Schmidt, K., Palmer, K.J., Mantell, J., Noakes, C., Johnson, A., Carter, D.A., Verkade, P., Watson, P. and Stephens, D.J. (2009) Organisation of human ER-exit sites: requirements for the localisation of Sec16 to transitional ER. J. Cell Sci. 122, 2924-2934 CrossRef PubMed
17. Budnik, A., Heesom, K.J. and Stephens, D.J. (2011) Characterization of human Sec16B: indications of specialized, non-redundant functions. Sci. Rep. 1, 77 CrossRef PubMed
18. Zacharogianni, M., Kondylis, V., Tang, Y., Farhan, H., Xanthakis, D., Fuchs, F., Boutros, M. and Rabouille, C. (2011) ERK7 is a negative regulator of protein secretion in response to amino-acid starvation by modulating Sec16 membrane association. EMBO J. 30, 3684-3700 CrossRef PubMed
19. Watson, P., Townley, A.K., Koka, P., Palmer, K.J. and Stephens, D.J. (2006) Sec16 defines endoplasmic reticulum exit sites and is required for secretory cargo export in mammalian cells. Traffic 7, 1678-1687 CrossRef PubMed
20. Bharucha, N., Liu, Y., Papanikou, E., McMahon, C., Esaki, M., Jeffrey, P.D., Hughson, F.M. and Glick, B.S. (2013) Sec16 influences transitional ER sites by regulating rather than organizing COPII. Mol. Biol. Cell 24,3406-3419 CrossRef PubMed
21. Yorimitsu, T. and Sato, K. (2012) Insights into structural and regulatory roles of Sec16 in COPII vesicle formation at ER exit sites. Mol. Biol. Cell 23, 2930-2942 CrossRef PubMed
22. Whittle, J.R. and Schwartz, T.U. (2010) Structure of the Sec13-Sec16 edge element, a template for assembly of the COPII vesicle coat. J. Cell Biol. 190, 347-361 CrossRef PubMed
23. Espenshade, P., Gimeno, R.E., Holzmacher, E., Teung, P. and Kaiser, C.A. (1995) Yeast SEC16 gene encodes a multidomain vesicle coat protein that interacts with Sec23p. J. Cell Biol. 131, 311-324 CrossRef PubMed
24. Gimeno, R.E., Espenshade, P. and Kaiser, C.A. (1996) COPII coat subunit interactions: Sec24p and Sec23p bind to adjacent regions of Sec16p. Mol. Biol. Cell 7, 1815-1823 CrossRef PubMed
25. Shaywitz, D.A., Espenshade, P.J., Gimeno, R.E. and Kaiser, C.A. (1997) COPII subunit interactions in the assembly of the vesicle coat. J. Biol. Chem. 272, 25413-25416 CrossRef PubMed
26. Shindiapina, P. and Barlowe, C. (2010) Requirements for transitional endoplasmic reticulum site structure and function in Saccharomyces cerevisiae. Mol. Biol. Cell 21, 1530-1545 CrossRef PubMed
27. Yonekawa, S., Furuno, A., Baba, T., Fujiki, Y., Ogasawara, Y., Yamamoto, A., Tagaya, M. and Tani, K. (2011) Sec16B is involved in the endoplasmic reticulum export of the peroxisomal membrane biogenesis factor peroxin 16 (Pex16) in mammalian cells. Proc. Natl. Acad. Sci. U.S.A. 108, 12746-12751 CrossRef PubMed
28. Iinuma, T., Shiga, A., Nakamoto, K., O'Brien, M.B., Aridor, M., Arimitsu, N., Tagaya, M. and Tani, K. (2007) Mammalian Sec16/p250 plays a role in membrane traffic from the endoplasmic reticulum. J. Biol. Chem. 282, 17632-17639 CrossRef PubMed
29. Antonny, B., Madden, D., Hamamoto, S., Orci, L. and Schekman, R. (2001) Dynamics of the COPII coat with GTP and stable analogues. Nat. Cell Biol. 3, 531-537 CrossRef PubMed
30. Kung, L.F., Pagant, S., Futai, E., D'Arcangelo, J.G., Buchanan, R., Dittmar, J.C., Reid, R.J., Rothstein, R., Hamamoto, S., Snapp, E.L. et al. (2012) Sec24p and Sec16p cooperate to regulate the GTP cycle of the COPII coat. EMBO J. 31, 1014-1027 CrossRef PubMed
31. Farhan, H., Weiss, M., Tani, K., Kaufman, R.J. and Hauri, H.P. (2008) Adaptation of endoplasmic reticulum exit sites to acute and chronic increases in cargo load. EMBO J. 27, 2043-2054 CrossRef PubMed
32. Guo, Y. and Linstedt, A.D. (2006) COPII-Golgi protein interactions regulate COPII coat assembly and Golgi size. J. Cell Biol. 174, 53-63 CrossRef PubMed
33. Palmer, K.J., Konkel, J.E. and Stephens, D.J. (2005) PCTAIRE protein kinases interact directly with the COPII complex and modulate secretory cargo transport. J. Cell Sci. 118, 3839-3847 CrossRef PubMed
34. Sharpe, L.J., Luu, W. and Brown, A.J. (2011) Akt phosphorylates Sec24: new clues into the regulation of ER-to-Golgi trafficking. Traffic 12, 19-27 CrossRef PubMed
35. Koreishi, M., Yu, S., Oda, M., Honjo, Y. and Satoh, A. (2013) CK2 phosphorylates Sec31 and regulates ER-to-Golgi trafficking. PLoS ONE 8, e54382 CrossRef PubMed
36. Cho, H.J., Yu, J., Xie, C., Rudrabhatla, P., Chen, X., Wu, J., Parisiadou, L., Liu, G., Sun, L., Ma, B., et al. (2014) Leucine-rich repeat kinase 2 regulates Sec16A at ER exit sites to allow ER-Golgi export. EMBO J. 33, 2314-2331 CrossRef PubMed
37. Roberts, P.J. and Der, C.J. (2007) Targeting the raf-MEK-ERK mitogen-activated protein kinase cascade for the treatment of cancer. Oncogene 26, 3291-3310 CrossRef PubMed
38. Farhan, H., Wendeler, M.W., Mitrovic, S., Fava, E., Silberberg, Y., Sharan, R., Zerial, M. and Hauri, H.P. (2010) MAPK signaling to the early secretory pathway revealed by kinase/phosphatase functional screening. J. Cell Biol. 189, 997-1011 CrossRef PubMed
39. Ishihara, N., Hamasaki, M., Yokota, S., Suzuki, K., Kamada, Y., Kihara, A., Yoshimori, T., Noda, T. and Ohsumi, Y. (2001) Autophagosome requires specific early sec proteins for its formation and NSF/SNARE for vacuolar fusion. Mol. Biol. Cell 12, 3690-3702 CrossRef PubMed
40. Graef, M., Friedman, J.R., Graham, C., Babu, M. and Nunnari, J. (2013) ER exit sites are physical and functional core autophagosome biogenesis components. Mol. Biol. Cell 24, 2918-2931 CrossRef PubMed
41. Tan, D., Cai, Y., Wang, J., Zhang, J., Menon, S., Chou, H.T., Ferro-Novick, S., Reinisch, K.M. and Walz, T. (2013) The EM structure of the TRAPPIII complex leads to the identification of a requirement for COPII vesicles on the macroautophagy pathway. Proc. Natl. Acad. Sci. U.S.A. 110, 19432-19437 CrossRef PubMed
42. Suzuki, K., Akioka, M., Kondo-Kakuta, C., Yamamoto, H. and Ohsumi, Y. (2013) Fine mapping of autophagy-related proteins during autophagosome formation in Saccharomyces cerevisiae. J. Cell Sci. 126, 2534-2544 CrossRef PubMed
43. Bartoli, K.M., Bishop, D.L. and Saunders, W.S. (2011) The role of molecular microtubule motors and the microtubule cytoskeleton in stress granule dynamics. Int. J. Cell Biol. 2011, 939848 CrossRef PubMed
44. Blumental-Perry, A., Haney, C.J., Weixel, K.M., Watkins, S.C., Weisz, O.A. and Aridor, M. (2006) Phosphatidylinositol 4-phosphate formation at ER exit sites regulates ER export. Dev. Cell 11, 671-682 CrossRef PubMed
45. Gimeno, R.E., Espenshade, P. and Kaiser, C.A. (1995) SED4 encodes a yeast endoplasmic reticulum protein that binds Sec16p and participates in vesicle formation. J. Cell Biol. 131, 325-338 CrossRef PubMed
46. Montegna, E.A., Bhave, M., Liu, Y., Bhattacharyya, D. and Glick, B.S. (2012) Sec12 binds to Sec16 at transitional ER sites. PLoS ONE 7, e31156 CrossRef PubMed
47. Zacharogianni, M., Aguilera-Gomez, A., Veenendaal, T., Smout, J. and Rabouille, C. (2014) A reversible non-membrane bound stress assembly that confers cell viability by preserving ERES components during amino-acid starvation. Elife. 3, doi: 10.7554/eLife.04132.