-
1
-
-
84875992357
-
The clinical relevance of cancer cell lines
-
PMID:23434901
-
Gillet, J.-P. Varma, S, Gottesman, MM. The clinical relevance of cancer cell lines. J Natl Cancer Inst 2013; 105:452-8; PMID:23434901; http://dx.doi.org/10.1093/jnci/djt007
-
(2013)
J Natl Cancer Inst
, vol.105
, pp. 452-458
-
-
Gillet, J.-P.1
Varma, S.2
Gottesman, MM.3
-
2
-
-
77949957365
-
Cell line-based platforms to evaluate the therapeutic efficacy of candidate anticancer agents
-
PMID:20300105
-
Sharma SV Haber DA, Settleman J. Cell line-based platforms to evaluate the therapeutic efficacy of candidate anticancer agents. Nat Rev Cancer 2010; 10:241-53; PMID:20300105; http://dx.doi.org/10.1038/ nrc2820
-
(2010)
Nat Rev Cancer
, vol.10
, pp. 241-253
-
-
Sharma, S.V.1
Haber, D.A.2
Settleman, J.3
-
3
-
-
78651330430
-
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
-
PMID:20952405
-
Forbes SA, Bindal N, Bamford S, Cole C, Kok CY, Beare D, Jia M, Shepherd R, Leung K, Menzies A, et al. COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Res 2011; 39:D945-50; PMID:20952405; http://dx.doi.org/10.1093/nar/gkq929
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D945-D950
-
-
Forbes, S.A.1
Bindal, N.2
Bamford, S.3
Cole, C.4
Kok, C.Y.5
Beare, D.6
Jia, M.7
Shepherd, R.8
Leung, K.9
Menzies, A.10
-
4
-
-
84859169877
-
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
-
PMID:22460905
-
Barretina, J, Caponigro G, Stransky N, Venkatesan K, Margolin AA, Kim S, Wilson CJ, Lehár J, Kryukov GV, Sonkin D, et al. The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity. Nature 2012; 483:603-7; PMID:22460905; http://dx.doi.org/10.1038/nature11003
-
(2012)
Nature
, vol.483
, pp. 603-607
-
-
Barretina, J.1
Caponigro, G.2
Stransky, N.3
Venkatesan, K.4
Margolin, A.A.5
Kim, S.6
Wilson, C.J.7
Lehár, J.8
Kryukov, G.V.9
Sonkin, D.10
-
5
-
-
84899080636
-
Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma
-
PMID:24621249
-
Castle JC, Loewer M, Boegel S, de Graaf J, Bender C, Tadmor AD, Boisguerin V, Bukur T, Sorn P, Paret C, et al. Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma. BMC Genomics 2014; 15:190; PMID:24621249; http://dx.doi. org/10.1186/1471-2164-15-190
-
(2014)
BMC Genomics
, vol.15
, pp. 190
-
-
Castle, J.C.1
Loewer, M.2
Boegel, S.3
de Graaf, J.4
Bender, C.5
Tadmor, A.D.6
Boisguerin, V.7
Bukur, T.8
Sorn, P.9
Paret, C.10
-
6
-
-
81255156922
-
Applications for T-cell epitope queries and tools in the immune epitope database and analysis resource
-
PMID:21047510
-
Kim Y. Sette A, Peters B. Applications for T-cell epitope queries and tools in the immune epitope database and analysis resource, J Immunol Methods 2011; 374:62-9; PMID:21047510; http://dx.doi.org/10.1016/j.jim.2010.10.010
-
(2011)
J Immunol Methods
, vol.374
, pp. 62-69
-
-
Kim, Y.1
Sette, A.2
Peters, B.3
-
7
-
-
84860209098
-
Exploiting the glioblastoma peptidome to discover novel tumour-associated antigens for immunotherapy
-
PMID:22418738
-
Dutoit V. Herold-Mende C, Hilf N, Schoor O, Beckhove P, Bucher J, Dorsch K, Flohr S, Fritsche J. Exploiting the glioblastoma peptidome to discover novel tumour-associated antigens for immunotherapy. Brain 2012; 135:1042-54; PMID:22418738; http:// dx.doi.org/10.1093/brain/aws042
-
(2012)
Brain
, vol.135
, pp. 1042-1054
-
-
Dutoit, V.1
Herold-Mende, C.2
Hilf, N.3
Schoor, O.4
Beckhove, P.5
Bucher, J.6
Dorsch, K.7
Flohr, S.8
Fritsche, J.9
-
8
-
-
84886943299
-
In silico prediction of tumor antigens derived from functional missense mutations of the cancer gene census
-
PMID:23243591
-
Khalili JS, Hanson RW, Szallasi Z. In silico prediction of tumor antigens derived from functional missense mutations of the cancer gene census. Oncoimmunology 2012; 1:1281-9; PMID:23243591; http://dx.doi.org/ 10.4161/onci.21511
-
(2012)
Oncoimmunology
, vol.1
, pp. 1281-1289
-
-
Khalili, J.S.1
Hanson, R.W.2
Szallasi, Z.3
-
9
-
-
76949105768
-
A census of predicted mutational epitopes suitable for immunologic cancer control
-
PMID:20035814
-
Warren RL, Holt RA. A census of predicted mutational epitopes suitable for immunologic cancer control. Hum Immunol 2010; 71:245-54; PMID:20035814; http://dx.doi.org/10.1016/j.humimm.2009.12.007
-
(2010)
Hum Immunol
, vol.71
, pp. 245-254
-
-
Warren, R.L.1
Holt, R.A.2
-
10
-
-
38849151665
-
Epitope landscape in breast and colorectal cancer
-
PMID:18245491
-
Segal, N. H. Parsons DW, Peggs KS, Velculescu V, Kinzler KW, Vogelstein B, Allison JP. Epitope landscape in breast and colorectal cancer. Cancer Res 2008; 68:889-92; PMID:18245491; http://dx.doi.org/10.1158/0008-5472.CAN-07-3095
-
(2008)
Cancer Res
, vol.68
, pp. 889-892
-
-
Segal, N.H.1
Parsons, D.W.2
Peggs, K.S.3
Velculescu, V.4
Kinzler, K.W.5
Vogelstein, B.6
Allison, J.P.7
-
11
-
-
84857725402
-
Exploiting the mutanome for tumor vaccination
-
PMID: 22237626
-
Castle JC, Kreiter S, Diekmann J, Löwer M, van de Roemer N, de Graaf J, Selmi A, Diken M, Boegel S, Paret C, et al. Exploiting the mutanome for tumor vaccination. Cancer Res 2012; 72:1081-91; PMID: 22237626; http://dx.doi.org/10.1158/0008-5472. CAN-11-3722
-
(2012)
Cancer Res
, vol.72
, pp. 1081-1091
-
-
Castle, J.C.1
Kreiter, S.2
Diekmann, J.3
Löwer, M.4
van de Roemer, N.5
de Graaf, J.6
Selmi, A.7
Diken, M.8
Boegel, S.9
Paret, C.10
-
12
-
-
84886075487
-
HLA ligandome tumor antigen discovery for personalized vaccine approach
-
PMID:24090147
-
Rammensee H-G, Singh-Jasuja H. HLA ligandome tumor antigen discovery for personalized vaccine approach. Expert Rev Vaccines 2013; 12:1211-17; PMID:24090147; http://dx.doi.org/10.1586/ 14760584.2013.836911
-
(2013)
Expert Rev Vaccines
, vol.12
, pp. 1211-1217
-
-
Rammensee, H-G.1
Singh-Jasuja, H.2
-
13
-
-
1642451752
-
The reagent database at dbMHC
-
PMID:14705985
-
Helmberg W, Dunivin R, Feolo M. The reagent database at dbMHC. Tissue Antigens 2004; 63:142-8; PMID:14705985; http://dx.doi.org/10.1111/j.1399-0039.2004.00163.x
-
(2004)
Tissue Antigens
, vol.63
, pp. 142-148
-
-
Helmberg, W.1
Dunivin, R.2
Feolo, M.3
-
14
-
-
0025222661
-
Tumor progression in four mammary epithelial cell lines derived from the same patient
-
PMID:1977518
-
Band V. Zajchowski D, Swisshelm K, Trask D, Kulesa V, Cohen C, Connolly J, Sager R. Tumor progression in four mammary epithelial cell lines derived from the same patient. Cancer Res 1990; 50:7351-7; PMID:1977518
-
(1990)
Cancer Res
, vol.50
, pp. 7351-7357
-
-
Band, V.1
Zajchowski, D.2
Swisshelm, K.3
Trask, D.4
Kulesa, V.5
Cohen, C.6
Connolly, J.7
Sager, R.8
-
15
-
-
84871400212
-
HLA typing from RNA-Seq sequence reads
-
Boegel S. Löwer M, Schäfer M, Bukur T, de Graaf J, Boisguérin V, Türeci O, Diken M, Castle JC, Sahin U. HLA typing from RNA-Seq sequence reads. Genome Med 2013; 4:102; http://dx.doi.org/10.1186/gm403
-
(2013)
Genome Med
, vol.4
, pp. 102
-
-
Boegel, S.1
Löwer, M.2
Schäfer, M.3
Bukur, T.4
de Graaf, J.5
Boisguérin, V.6
Türeci, O.7
Diken, M.8
Castle, J.C.9
Sahin, U.10
-
16
-
-
0024957941
-
Modulation of MHC gene expression in human breast carcinoma cells by hormones
-
PMID: 2639911
-
Teh M, Hui KM. Modulation of MHC gene expression in human breast carcinoma cells by hormones. J Immunogenet 1989; 16:397-405 ; PMID: 2639911; http://dx.doi.org/10.1111/j.1744-313X.1989.tb00487.x
-
(1989)
J Immunogenet
, vol.16
, pp. 397-405
-
-
Teh, M.1
Hui, K.M.2
-
17
-
-
4744373672
-
The selection of tumor variants with altered expression of classical and nonclassical MHC class I molecules: implications for tumor immune escape
-
PMID:15069585
-
Algarra I Garćia-Lora A, Cabrera T, Ruiz-Cabello F, Garrido F. The selection f tumor variants with altered expression of classical and nonclassical MHC class I molecules: implications for tumor immune escape. Cancer Immunol Immunother 2004; 3:904-10; PMID:15069585; http://dx.doi.org/10.1007/s00262-004-0517-9
-
(2004)
Cancer Immunol Immunother
, vol.53
, pp. 904-910
-
-
Algarra, I.1
Garćia-Lora, A.2
Cabrera, T.3
Ruiz-Cabello, F.4
Garrido, F.5
-
18
-
-
0347759811
-
Down-regulation of HLA class I antigen processing molecules: an immune escape mechanism of renal cell carcinoma?
-
PMID:14713847
-
Atkins D, Ferrone S, Schmahl GE, Störkel, S, Seliger B. Down-regulation of HLA class I antigen processing molecules: an immune escape mechanism of renal cell carcinoma? J Urol 2004; 171:885-9; PMID:14713847; http://dx.doi.org/10.1097/01.ju.0000094807.95420.fe
-
(2004)
J Urol
, vol.171
, pp. 885-889
-
-
Atkins, D.1
Ferrone, S.2
Schmahl, G.E.3
Störkel, S.4
Seliger, B.5
-
19
-
-
0036006510
-
The use of HLA-A*0201-transfected K562 as standard antigen-presenting cells for CD8(C) T lymphocytes in IFN-gamma ELISPOT assays
-
PMID:11730845
-
Britten CM, Meyer RG, Kreer T, Drexler I, Wölfel T, Herr W. The use of HLA-A*0201-transfected K562 as standard antigen-presenting cells for CD8(C) T lymphocytes in IFN-gamma ELISPOT assays. J Immunol Methods 2002; 259:95-110; PMID:11730845; http://dx.doi.org/10.1016/S0022-1759(01)00499-9
-
(2002)
J Immunol Methods
, vol.259
, pp. 95-110
-
-
Britten, C.M.1
Meyer, R.G.2
Kreer, T.3
Drexler, I.4
Wölfel, T.5
Herr, W.6
-
20
-
-
0037168611
-
Engagement of CD160 receptor by HLA-C is a triggering mechanism used by circulating natural killer (NK) cells to mediate cytotoxicity
-
PMID:12486241
-
Le Bouteiller P, Barakonyi A, Giustiniani J, Lenfant F, Marie-Cardine A, Aguerre-Girr M, Rabot M, Hilgert I, Mami-Chouaib F, Tabiasco J, et al. Engagement of CD160 receptor by HLA-C is a triggering mechanism used by circulating natural killer (NK) cells to mediate cytotoxicity. Proc Natl Acad Sci U S A 2002; 99:16963-68; PMID:12486241; http://dx.doi.org/ 10.1073/pnas.012681099
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 16963-16968
-
-
Le Bouteiller, P.1
Barakonyi, A.2
Giustiniani, J.3
Lenfant, F.4
Marie-Cardine, A.5
Aguerre-Girr, M.6
Rabot, M.7
Hilgert, I.8
Mami-Chouaib, F.9
Tabiasco, J.10
-
21
-
-
84988141309
-
Molecular analysis of MHCclass-I alterations in human tumor cell lines
-
PMID:1906050
-
Ruiz-Cabello, F. et al. Molecular analysis of MHCclass-I alterations in human tumor cell lines. Int J Cancer Suppl 1991; 6:123-130; PMID:1906050; http:// dx.doi.org/10.1002/ijc.2910470723
-
(1991)
Int J Cancer Suppl
, vol.6
, pp. 123-130
-
-
Ruiz-Cabello, F.1
-
22
-
-
0028228308
-
Locus-specific analysis of human leukocyte antigen class I expression in melanoma cell lines
-
PMID:8081556
-
Marincola FM, Shamamian P, Simonis TB, Abati A, Hackett J, O'Dea T, Fetsch P, Yannelli J, Restifo NP, Mulé JJ. Locus-specific analysis of human leukocyte antigen class I expression in melanoma cell lines. J Immunother Emphasis Tumor Immunol 1994; 16:13-23; PMID:8081556; http://dx.doi.org/10.1097/ 00002371-199407000-00002
-
(1994)
J Immunother Emphasis Tumor Immunol
, vol.16
, pp. 13-23
-
-
Marincola, F.M.1
Shamamian, P.2
Simonis, T.B.3
Abati, A.4
Hackett, J.5
O'Dea, T.6
Fetsch, P.7
Yannelli, J.8
Restifo, N.P.9
Mulé, J.J.10
-
23
-
-
44649153892
-
SYFPEITHI: database for searching and T-cell epitope prediction
-
PMID:18449993
-
Schuler MM, Nastke M-D, Stevanovikć S. SYFPEITHI: database for searching and T-cell epitope prediction. Methods Mol Biol 2007; 409:75-93; PMID:18449993; http://dx.doi.org/10.1007/978-1-60327-118-9_5
-
(2007)
Methods Mol Biol
, vol.409
, pp. 75-93
-
-
Schuler, M.M.1
Nastke, M-D.2
Stevanovikć, S.3
-
24
-
-
84881611553
-
MHCcluster, a method for functional clustering of MHC molecules
-
PMID:23775223
-
Thomsen M, Lundegaard C, Buus S, Lund O, Nielsen M. MHCcluster, a method for functional clustering of MHC molecules. Immunogenetics 2013; 65:655-65; PMID:23775223; http://dx.doi.org/10.1007/s00251-013-0714-9
-
(2013)
Immunogenetics
, vol.65
, pp. 655-665
-
-
Thomsen, M.1
Lundegaard, C.2
Buus, S.3
Lund, O.4
Nielsen, M.5
-
25
-
-
84880145306
-
Database of T cell-defined human tumor antigens: the 2013 update
-
PMID:23882160
-
Vigneron, N. Stroobant, V. Van den Eynde, Benoît J, van der Bruggen, Pierre. Database of T cell-defined human tumor antigens: the 2013 update. Cancer Immun 2013; 13:15; PMID:23882160
-
(2013)
Cancer Immun
, vol.13
, pp. 15
-
-
Vigneron, N.1
Stroobant, V.2
Van den, Eynde.3
Benoît, J.4
van der Bruggen, P.5
-
26
-
-
34247503697
-
Immunological characterization of missense mutations occurring within cytotoxic T cell-defined p53 epitopes in HLA-A*0201C squamous cell carcinomas of the head and neck
-
PMID:17294448
-
ItoD, Visus C, Hoffmann TK, Balz V, BierH, Appella E, Whiteside TL, Ferris RL, DeLeo AB. Immunological characterization of missense mutations occurring within cytotoxic T cell-defined p53 epitopes in HLA-A*0201C squamous cell carcinomas of the head and neck. Int J Cancer 2007; 120:2618-24; PMID:17294448; http://dx.doi. org/10.1002/ijc.22584
-
(2007)
Int J Cancer
, vol.120
, pp. 2618-2624
-
-
Ito, D.1
Visus, C.2
Hoffmann, T.K.3
Balz, V.4
Bier, H.5
Appella, E.6
Whiteside, T.L.7
Ferris, R.L.8
DeLeo, A.B.9
-
27
-
-
36448955695
-
The costs of using unauthenticated, over-passaged cell lines: how much more data do we need?
-
575, 577-8, passim
-
Hughes P Marshall D, Reid Y, Parkes, H, Gelber C. The costs of using unauthenticated, over-passaged cell lines: how much more data do we need?. BioTechniques 2007; 43:575, 577-8, 581-2 passim: http://dx.doi. org/10.2144/000112598
-
(2007)
BioTechniques
, vol.43
, pp. 581-582
-
-
Hughes, P.1
Marshall, D.2
Reid, Y.3
Parkes, H.4
Gelber, C.5
-
28
-
-
0035188492
-
An ID card for tumour cell lines: HLA typing can help
-
PMID:11902535
-
Giacomini P, Giorda E, Pera C, Ferrara GB. An ID card for tumour cell lines: HLA typing can help. Lancet Oncol 2001; 2:658 ; PMID:11902535; http://dx.doi. org/10.1016/S1470-2045(01)00554-X
-
(2001)
Lancet Oncol
, vol.2
, pp. 658
-
-
Giacomini, P.1
Giorda, E.2
Pera, C.3
Ferrara, G.B.4
-
29
-
-
33947101019
-
Patterns of somatic mutation in human cancer genomes
-
PMID: 17344846
-
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, Bignell G, Davies H, Teague J, Butler A, Stevens C, et al. Patterns of somatic mutation in human cancer genomes. Nature 2007; 446:153-158; PMID: 17344846; http://dx.doi.org/10.1038/nature05610
-
(2007)
Nature
, vol.446
, pp. 153-158
-
-
Greenman, C.1
Stephens, P.2
Smith, R.3
Dalgliesh, G.L.4
Hunter, C.5
Bignell, G.6
Davies, H.7
Teague, J.8
Butler, A.9
Stevens, C.10
-
30
-
-
84886258628
-
Revealing selection in cancer using the predicted functional impact of cancer mutations Application to nomination of cancer drivers.
-
PMID:23819556
-
Reva B. Revealing selection in cancer using the predicted functional impact of cancer mutations. Application to nomination of cancer drivers. BMC Genomics 2013; 14:Suppl 3:S8; PMID:23819556; http://dx.doi.org/10.1186/1471-2164-14-S3-S8
-
(2013)
BMC Genomics
, vol.14
-
-
Reva, B.1
-
31
-
-
79953158399
-
-
PMID:21436442
-
Stratton MR Exploring the genomes of cancer cells: progress and promise. Science 2011; 331:1553-8; PMID:21436442; http://dx.doi.org/10.1126/science. 1204040
-
(2011)
Science
, vol.331
, pp. 1553-1558
-
-
-
32
-
-
84880276438
-
Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells
-
PMID:23644516
-
Robbins PF, Lu YC, El-Gamil M, Li YF, Gross C, Gartner J, Lin JC, Teer JK, Cliften P, Tycksen E, et al. Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells. Nat Med 2013; 19:747-52; PMID:23644516; http://dx.doi.org/10.1038/nm.3161
-
(2013)
Nat Med
, vol.19
, pp. 747-752
-
-
Robbins, P.F.1
Lu, Y.C.2
El-Gamil, M.3
Li, Y.F.4
Gross, C.5
Gartner, J.6
Lin, J.C.7
Teer, J.K.8
Cliften, P.9
Tycksen, E.10
-
33
-
-
84862776855
-
Cancer exome analysis reveals a T-cell-dependent mechanism of cancer immunoediting
-
PMID:22318521
-
Matsushita, H, Vesely MD, Koboldt DC, Rickert CG, Uppaluri R, Magrini VJ, Arthur CD, White JM, Chen YS, et al. Cancer exome analysis reveals a T-cell-dependent mechanism of cancer immunoediting. Nature 2012; 482:400-4; PMID:22318521; http://dx.doi.org/10.1038/nature10755
-
(2012)
Nature
, vol.482
, pp. 400-404
-
-
Matsushita, H.1
Vesely, M.D.2
Koboldt, D.C.3
Rickert, C.G.4
Uppaluri, R.5
Magrini, V.J.6
Arthur, C.D.7
White, J.M.8
Chen, Y.S.9
-
34
-
-
84990011361
-
HLA-binding properties of tumor neoepitopes in humans
-
PMID:24894089
-
Fritsch EF, Rajasagi M, Ott PA, Brusic V, Hacohen N, Wu CJ. HLA-binding properties of tumor neoepitopes in humans. Cancer Immunol Res 2014; 2(6):522-9; PMID:24894089; http://dx.doi.org/10.1158/2326-6066.CIR-13-0227
-
(2014)
Cancer Immunol Res
, vol.2
, Issue.6
, pp. 522-529
-
-
Fritsch, E.F.1
Rajasagi, M.2
Ott, P.A.3
Brusic, V.4
Hacohen, N.5
Wu, C.J.6
-
35
-
-
84883251918
-
Targeting the tumor mutanome for personalized vaccination therapy
-
PMID:22934277
-
Kreiter S, Castle JC, Türeci Ö, Sahin U. Targeting the tumor mutanome for personalized vaccination therapy. Oncoimmunology 2012; 1:768-9; PMID:22934277; http://dx.doi.org/10.4161/onci.19727
-
(2012)
Oncoimmunology
, vol.1
, pp. 768-769
-
-
Kreiter, S.1
Castle, J.C.2
Türeci, Ö.3
Sahin, U.4
-
36
-
-
79955550445
-
-
PMID: 21526222
-
A user's guide to the encyclopedia of DNA elements (ENCODE). PLoS Biol 2011; 9:e1001046; PMID: 21526222; http://dx.doi.org/10.1371/journal.pbio. 1001046.
-
(2011)
PLoS Biol
, vol.9
-
-
-
37
-
-
84866849548
-
Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer
-
PMID:22941189
-
Rudin CM, Durinck S, Stawiski EW, Poirier JT, Modrusan Z, Shames DS, Bergbower EA, Guan Y, Shin J, Guillory J. Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer. Nat Genet 2012; 44:1111-6; PMID:22941189; http://dx.doi.org/10.1038/ng.2405
-
(2012)
Nat Genet
, vol.44
, pp. 1111-1116
-
-
Rudin, C.M.1
Durinck, S.2
Stawiski, E.W.3
Poirier, J.T.4
Modrusan, Z.5
Shames, D.S.6
Bergbower, E.A.7
Guan, Y.8
Shin, J.9
Guillory, J.10
-
38
-
-
84876522835
-
BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA
-
PMID:23203881
-
Schomburg I, Chang A, Placzek S, Söhngen C, Rother M, Lang M, Munaretto C, Ulas S, Stelzer M, Grote A, et al. BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA. Nucleic Acids Res 2013; 41:D764-72; PMID:23203881; http://dx.doi.org/10.1093/nar/gks1049
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D764-D772
-
-
Schomburg, I.1
Chang, A.2
Placzek, S.3
Söhngen, C.4
Rother, M.5
Lang, M.6
Munaretto, C.7
Ulas, S.8
Stelzer, M.9
Grote, A.10
-
39
-
-
18144393498
-
HLA class I and II genotype of the NCI-60 cell lines
-
PMID:15748285
-
Adams S, Robbins FM, Chen D, Wagage D, Holbeck SL, Morse HC 3rd, Stroncek D, Marincola FM. HLA class I and II genotype of the NCI-60 cell lines. J Transl Med 2005; 3:11; PMID:15748285; http://dx.doi.org/10.1186/1479-5876-3-11
-
(2005)
J Transl Med
, vol.3
, pp. 11
-
-
Adams, S.1
Robbins, F.M.2
Chen, D.3
Wagage, D.4
Holbeck, S.L.5
Morse III, H.C.6
Stroncek, D.7
Marincola, F.M.8
-
40
-
-
84873593975
-
The IMGT/HLA database
-
PMID:23080122
-
Robinson, J. Halliwell JA, McWilliam H, Lopez R, Parham P, Marsh SG. The IMGT/HLA database. Nucleic Acids Res 2013; 41:D1222-7; PMID:23080122; http://dx.doi.org/10.1093/nar/gks949
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D1222-D1227
-
-
Robinson, J.1
Halliwell, J.A.2
McWilliam, H.3
Lopez, R.4
Parham, P.5
Marsh, S.G.6
-
41
-
-
85080021002
-
-
Available at (last access: 21.02.2014)
-
Public Health England.HLA-Typed Collection. Available at http://www.phe-culturecollections.org.uk/products/ celllines/hlatyped/browse.jsp (last access: 21.02.2014)
-
HLA-Typed Collection.
-
-
-
42
-
-
84865586015
-
Measuring ambiguity in HLA typing methods
-
PMID:22952712
-
Paunić V, Gragert L, Madbouly A, Freeman J, Maiers M. Measuring ambiguity in HLA typing methods. PLoS ONE 2012; 7:e43585; PMID:22952712; http://dx.doi.org/10.1371/journal.pone.0043585
-
(2012)
PLoS ONE
, vol.7
-
-
Paunić, V.1
Gragert, L.2
Madbouly, A.3
Freeman, J.4
Maiers, M.5
-
43
-
-
46249106990
-
Mapping, quantifying mammalian transcriptomes by RNA-Seq
-
PMID:18516045
-
Mortazavi A, Williams BA, McCue K, Schaeffer, L, Wold B. Mapping and quantifying mammalian transcriptomes by RNA-Seq, Nat Methods 2008; 5:621-8; PMID:18516045; http://dx.doi.org/10.1038/nmeth.1226
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
44
-
-
48449106045
-
NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11
-
PMID: 18463140
-
Lundegaard C. Lamberth K, Harndahl M, Buus S, Lund O, Nielsen M. NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11. Nucleic Acids Res 2008; 36:W509-12; PMID: 18463140; http://dx.doi.org/10.1093/nar/gkn202
-
(2008)
Nucleic Acids Res
, vol.36
, pp. W509-W512
-
-
Lundegaard, C.1
Lamberth, K.2
Harndahl, M.3
Buus, S.4
Lund, O.5
Nielsen, M.6
-
45
-
-
25444476693
-
Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method
-
PMID:15927070
-
Peters B, Sette A. Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method. BMC Bioinformatics 2005; 6:132; PMID:15927070; http://dx.doi.org/10.1186/1471-2105-6-132
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 132
-
-
Peters, B.1
Sette, A.2
-
46
-
-
0027973079
-
The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes
-
PMID:7527444
-
Sette A, Vitiello A, Reherman B, Fowler P, Nayersina R, Kast WM, Melief CJ, Oseroff C, Yuan L, Ruppert J, et al. The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes. J Immunol 1994; 153:5586-92; PMID:7527444
-
(1994)
J Immunol
, vol.153
, pp. 5586-5592
-
-
Sette, A.1
Vitiello, A.2
Reherman, B.3
Fowler, P.4
Nayersina, R.5
Kast, W.M.6
Melief, C.J.7
Oseroff, C.8
Yuan, L.9
Ruppert, J.10
-
47
-
-
84890333499
-
HLA class I alleles are associated with peptidebinding repertoires of different size, affinity, and immunogenicity
-
PMID: 24190657
-
Paul S. Weiskopf D, Angelo MA, Sidney J, Peters B, Sette A. HLA class I alleles are associated with peptidebinding repertoires of different size, affinity, and immunogenicity. J Immunol 2013; 191:5831-9; PMID: 24190657; http://dx.doi.org/10.4049/jimmunol.1302101
-
(2013)
J Immunol
, vol.191
, pp. 5831-5839
-
-
Paul, S.1
Weiskopf, D.2
Angelo, M.A.3
Sidney, J.4
Peters, B.5
Sette, A.6
|