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Volumn 589, Issue 3, 2015, Pages 279-284

Uncapped 5′ ends of mRNAs targeted by cytoplasmic capping map to the vicinity of downstream CAGE tags

Author keywords

CAGE; Cytoplasm; Cytoplasmic capping; Mammalian cell; mRNA capping; Uncapped 5 end

Indexed keywords

MESSENGER RNA; TRANSCRIPTOME; CAPPED RNA; LONG UNTRANSLATED RNA; RNA SPLICING;

EID: 84921467394     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2014.12.009     Document Type: Article
Times cited : (21)

References (15)
  • 2
    • 0036790995 scopus 로고    scopus 로고
    • Beta-globin mRNA decay in erythroid cells: UG site-preferred endonucleolytic cleavage that is augmented by a premature termination codon
    • Stevens, A., Wang, Y., Bremer, K., Zhang, J., Hoepfner, R., Antoniou, M., Schoenberg, D.R. and Maquat, L.E. (2002) Beta-globin mRNA decay in erythroid cells: UG site-preferred endonucleolytic cleavage that is augmented by a premature termination codon. Proc. Natl. Acad. Sci. U.S.A. 99, 12741-12746.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 12741-12746
    • Stevens, A.1    Wang, Y.2    Bremer, K.3    Zhang, J.4    Hoepfner, R.5    Antoniou, M.6    Schoenberg, D.R.7    Maquat, L.E.8
  • 3
    • 84884575975 scopus 로고    scopus 로고
    • SMG6 cleavage generates metastable decay intermediates from nonsense-containing β-globin mRNA
    • Mascarenhas, R., Dougherty, J.A. and Schoenberg, D.R. (2013) SMG6 cleavage generates metastable decay intermediates from nonsense-containing β-globin mRNA. PLoS One 8, e74791.
    • (2013) PLoS One , vol.8 , pp. e74791
    • Mascarenhas, R.1    Dougherty, J.A.2    Schoenberg, D.R.3
  • 4
    • 0026641165 scopus 로고
    • Human beta-globin mRNAs that harbor a nonsense codon are degraded in murine erythroid tissues to intermediates lacking regions of exon I or exons I and II that have a cap-like structure at the 50 termini
    • Lim, S.K. and Maquat, L.E. (1992) Human beta-globin mRNAs that harbor a nonsense codon are degraded in murine erythroid tissues to intermediates lacking regions of exon I or exons I and II that have a cap-like structure at the 50 termini. EMBO J. 11, 3271-3278.
    • (1992) EMBO J , vol.11 , pp. 3271-3278
    • Lim, S.K.1    Maquat, L.E.2
  • 5
    • 64649087770 scopus 로고    scopus 로고
    • Identification of a cytoplasmic complex that adds a cap onto 50 -monophosphate RNA
    • Otsuka, Y., Kedersha, N.L. and Schoenberg, D.R. (2009) Identification of a cytoplasmic complex that adds a cap onto 50 -monophosphate RNA. Mol. Cell. Biol. 29, 2155-2167.
    • (2009) Mol. Cell. Biol. , vol.29 , pp. 2155-2167
    • Otsuka, Y.1    Kedersha, N.L.2    Schoenberg, D.R.3
  • 6
    • 84908192020 scopus 로고    scopus 로고
    • The cytoplasmic capping complex assembles on adapter protein Nck1 bound to the proline-rich C-terminus of mammalian capping enzyme
    • Mukherjee, C., Bakthavachalu, B. and Schoenberg, D.R. (2014) The cytoplasmic capping complex assembles on adapter protein Nck1 bound to the proline-rich C-terminus of mammalian capping enzyme. PLoS Biol. 12, e1001933.
    • (2014) PLoS Biol , vol.12 , pp. e1001933
    • Mukherjee, C.1    Bakthavachalu, B.2    Schoenberg, D.R.3
  • 7
    • 84866951989 scopus 로고    scopus 로고
    • Identification of cytoplasmic capping targets reveals a role for cap homeostasis in translation and mRNA stability
    • Mukherjee, C., Patil, D.P., Kennedy, B.A., Bakthavachalu, B., Bundschuh, R. and Schoenberg, D.R. (2012) Identification of cytoplasmic capping targets reveals a role for cap homeostasis in translation and mRNA stability. Cell Rep. 2, 674-684.
    • (2012) Cell Rep , vol.2 , pp. 674-684
    • Mukherjee, C.1    Patil, D.P.2    Kennedy, B.A.3    Bakthavachalu, B.4    Bundschuh, R.5    Schoenberg, D.R.6
  • 13
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - The BLAST-like alignment tool
    • Kent, W.J. (2002) BLAT - the BLAST-like alignment tool. Genome Res. 12, 656-664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 15
    • 84871962210 scopus 로고    scopus 로고
    • High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
    • Batut, P., Dobin, A., Plessy, C., Carninci, P. and Gingeras, T.R. (2013) High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Genome Res. 23, 169-180.
    • (2013) Genome Res , vol.23 , pp. 169-180
    • Batut, P.1    Dobin, A.2    Plessy, C.3    Carninci, P.4    Gingeras, T.R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.