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Volumn 14, Issue 1, 2015, Pages 190-198

Bioinformatic analysis of phage AB3, a phiKMV-like virus infecting Acinetobacter baumannii

Author keywords

Acinetobacter baumannii; Bioinformatic analysis; Phage

Indexed keywords

DOUBLE STRANDED DNA; RNA POLYMERASE; TRANSFER RNA; DNA DIRECTED RNA POLYMERASE;

EID: 84921264921     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2015.January.16.2     Document Type: Article
Times cited : (11)

References (15)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4
  • 2
    • 0033214628 scopus 로고    scopus 로고
    • Heuristic approach to deriving models for gene finding
    • Besemer J and Borodovsky M (1999). Heuristic approach to deriving models for gene finding. Nucleic Acids Res. 27: 3911-3920.
    • (1999) Nucleic Acids Res , vol.27 , pp. 3911-3920
    • Besemer, J.1    Borodovsky, M.2
  • 3
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: Multiple alignment of conserved genomic sequence with rearrangements
    • Darling AC, Mau B, Blattner FR and Perna NT (2004). Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14: 1394-1403.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4
  • 4
    • 0035925052 scopus 로고    scopus 로고
    • Genomic sequence and expression analyses of human chromatin assembly factor 1 p150 gene
    • Dong H, Lin W, Zhang CK, Xiong H, et al. (2001). Genomic sequence and expression analyses of human chromatin assembly factor 1 p150 gene. Gene 264: 187-196.
    • (2001) Gene , vol.264 , pp. 187-196
    • Dong, H.1    Lin, W.2    Zhang, C.K.3    Xiong, H.4
  • 5
    • 84862664371 scopus 로고    scopus 로고
    • EASL clinical practice guidelines: Management of chronic hepatitis B virus infection
    • European Association for the Study of the Liver (2012). EASL clinical practice guidelines: management of chronic hepatitis B virus infection. J. Hepatol. 57: 167-185.
    • (2012) J. Hepatol , vol.57 , pp. 167-185
  • 6
    • 79251525551 scopus 로고    scopus 로고
    • Efficacy of polyvalent bacteriophage P-27/HP to control multidrug resistant Staphylococcus aureus associated with human infections
    • Gupta R and Prasad Y (2011). Efficacy of polyvalent bacteriophage P-27/HP to control multidrug resistant Staphylococcus aureus associated with human infections. Curr. Microbiol. 62: 255-260.
    • (2011) Curr. Microbiol , vol.62 , pp. 255-260
    • Gupta, R.1    Prasad, Y.2
  • 8
    • 84869122431 scopus 로고    scopus 로고
    • Complete genome sequence of the podoviral bacteriophage YMC/09/02/ B1251 ABA BP, which causes the lysis of an OXA-23-producing carbapenem-resistant Acinetobacter baumannii isolate from a septic patient
    • Jeon J, Kim JW, Yong D, Lee K, et al. (2012). Complete genome sequence of the podoviral bacteriophage YMC/09/02/ B1251 ABA BP, which causes the lysis of an OXA-23-producing carbapenem-resistant Acinetobacter baumannii isolate from a septic patient. J. Virol. 86: 12437-12438.
    • (2012) J. Virol , vol.86 , pp. 12437-12438
    • Jeon, J.1    Kim, J.W.2    Yong, D.3    Lee, K.4
  • 9
    • 0036272755 scopus 로고    scopus 로고
    • Nucleotide sequence of a ssRNA phage from Acinetobacter: Kinship to coliphages
    • Klovins J, Overbeek GP, van den Worm SH, Ackermann HW, et al. (2002). Nucleotide sequence of a ssRNA phage from Acinetobacter: kinship to coliphages. J. Gen. Virol. 83: 1523-1533.
    • (2002) J. Gen. Virol , vol.83 , pp. 1523-1533
    • Klovins, J.1    Overbeek, G.P.2    Van Den Worm, S.H.3    Ackermann, H.W.4
  • 10
    • 4644320433 scopus 로고    scopus 로고
    • Increasing prevalence of vancomycin-resistant enterococci, and cefoxitin-, imipenem- and fluoroquinolone-resistant gram-negative bacilli: A KONSAR study in 2002
    • Lee K, Kim YA, Park YJ, Lee HS, et al. (2004). Increasing prevalence of vancomycin-resistant enterococci, and cefoxitin-, imipenem- and fluoroquinolone-resistant gram-negative bacilli: a KONSAR study in 2002. Yonsei Med. J. 45: 598- 608.
    • (2004) Yonsei Med. J , vol.45 , pp. 598-608
    • Lee, K.1    Kim, Y.A.2    Park, Y.J.3    Lee, H.S.4
  • 11
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe TM and Eddy SR (1997). TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
    • (1997) Nucleic Acids Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 12
    • 0033990046 scopus 로고    scopus 로고
    • Phylogenetic analysis using PHYLIP. Methods Mol
    • Retief JD (2000). Phylogenetic analysis using PHYLIP. Methods Mol. Biol. 132: 243-258.
    • (2000) Biol , vol.132 , pp. 243-258
    • Retief, J.D.1
  • 13
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European Molecular Biology Open Software Suite
    • Rice P, Longden I and Bleasby A (2000). EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16: 276-277.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 14
    • 0037045398 scopus 로고    scopus 로고
    • ORF-FINDER: A vector for high-throughput gene identification
    • Rombel IT, Sykes KF, Rayner S and Johnston SA (2002). ORF-FINDER: a vector for high-throughput gene identification. Gene 282: 33-41.
    • (2002) Gene , vol.282 , pp. 33-41
    • Rombel, I.T.1    Sykes, K.F.2    Rayner, S.3    Johnston, S.A.4
  • 15
    • 0642342573 scopus 로고    scopus 로고
    • CoreGenes: A computational tool for identifying and cataloging “core” genes in a set of small genomes
    • Zafar N, Mazumder R and Seto D (2002). CoreGenes: a computational tool for identifying and cataloging “core” genes in a set of small genomes. BMC Bioinformatics 3: 12.
    • (2002) BMC Bioinformatics , vol.3 , pp. 12
    • Zafar, N.1    Mazumder, R.2    Seto, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.