DNA origami nanoneedles on freestanding lipid membranes as a tool to observe isotropic-nematic transition in two dimensions

Nano Letters

Volumn 15, Issue 1, 2015, Pages 649-655

  Czogalla, Aleksander ^a,b,c   Kauert, Dominik J ^d   Seidel, Ralf ^d   Schwille, Petra ^e   Petrov, Eugene P ^e  

^a DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

^b GERMAN CENTER FOR DIABETES RESEARCH DZD   (Germany)

^c UNIVERSITY OF WROC AW   (Poland)

^d UNIVERSITY OF MÜNSTER   (Germany)

^e MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

Author keywords

DNA origami; fluorescence correlation spectroscopy; isotropic nematic transition; lipid membrane; rotational diffusion; translational diffusion

Indexed keywords

DIFFUSION; DIFFUSION IN SOLIDS; FLUORESCENCE; FLUORESCENCE SPECTROSCOPY; INTELLIGENT SYSTEMS; LIPIDS; MONTE CARLO METHODS; NANONEEDLES; NEEDLES; SPECTROSCOPIC ANALYSIS;

DNA ORIGAMIS; FLUORESCENCE CORRELATION SPECTROSCOPY; ISOTROPIC-NEMATIC TRANSITIONS; LIPID MEMBRANES; ROTATIONAL DIFFUSION; TRANSLATIONAL DIFFUSION;

DNA;

DNA; LIPID BILAYER; NANOMATERIAL;

CHEMICAL MODEL; CHEMISTRY; LIPID BILAYER; MONTE CARLO METHOD; SPECTROFLUOROMETRY;

DNA; LIPID BILAYERS; MODELS, CHEMICAL; MONTE CARLO METHOD; NANOSTRUCTURES; SPECTROMETRY, FLUORESCENCE;

EID: 84920971374     PISSN: 15306984     EISSN: 15306992     Source Type: Journal    
DOI: 10.1021/nl504158h     Document Type: Article

References (50)

1. Frenkel, D.; Eppenga, R. Phys. Rev. A 1985, 31, 1776-1787
2. Bates, M. A.; Frenkel, D. J. Chem. Phys. 2000, 112, 10034-10041
3. Khandkar, M. D.; Barma, M. Phys. Rev. E 2005, 72, 051717
4. Vink, R. L. C. Eur. Phys. J. B 2009, 72, 225-231
5. Chen, Z. Y. Phys. Rev. Lett. 1993, 71, 93-96
6. Xu, W.-S.; Li, Y.-W.; Sun, Z.-Y.; An, L.-J. J. Chem. Phys. 2013, 139, 024501
7. Kim, F.; Kwan, S.; Akana, J.; Yang, P. J. Am. Chem. Soc. 2001, 123, 4360-4361
8. Kwan, S.; F. Kim, F.; Arkana, J.; Yang, P. Chem. Commun. 2001, 447-448
9. Tao, A.; Kim, F.; Hess, C.; Goldberger, J.; He, R.; Sun, Y.; Xia, Y.; Yang, P. Nano Lett. 2003, 3, 1229-1233
10. Hore, M. J. A.; Composto, R. J. ACS Nano 2010, 4, 6941-6949
11. Yoo, P. J.; Nam, K. T.; Qi, J.; Lee, S.-K.; Park, J.; Belcher, A. M.; Hammond, P. T. Nat. Mater. 2006, 5, 234-240
12. Isa, L.; Jung, J. M.; Mezzenga, R. Soft Matter 2011, 7, 8127-8134
13. Jordens, S.; Isa, L.; Usov, I.; Mezzenga, R. Nat. Commun. 2013, 4, 1917
14. Almeida, P. F. F.; Wiegel, F. W. J. Theor. Biol. 2006, 238, 269-278
15. Murugesan, Y. K.; Pasini, D.; Rey, A. D. Soft Matter 2011, 7, 7078-7093
16. Lipowski, R. Faraday Discuss. 2013, 161, 305-331
17. Ramakrishnan, N.; Sunil Kumar, P. B.; Ipsen, J. H. Biophys. J. 2013, 104, 1018-1028
18. Cui, H.; Mim, C.; Vázquez, F. X.; Lyman, E.; Unger, V. M.; Voth, G. A. Biophys. J. 2013, 104, 404-411
19. Simunovic, M.; Mim, C.; Marlovits, T. C.; Resch, G.; Unger, V. M.; Voth, G. A. Biophys. J. 2013, 105, 711-719
20. Han, Y.; Alsayed, A. M.; Nobili, M.; Zhang, J.; Lubensky, T. C.; Yodh, A. G. Science 2006, 314, 626-630
21. Han, Y.; Alsayed, A. M.; Nobili, M.; Yodh, A. G. Phys. Rev. E 2009, 80, 011403
22. Li, G.; Tang, J. X. Phys. Rev. E 2004, 69, 061921
23. Duggal, R.; Pasquali, M. Phys. Rev. Lett. 2006, 96, 246104
24. Bhaduri, B.; Neild, A.; Ng, T. W. Appl. Phys. Lett. 2008, 92, 084105
25. Marshall, B. D.; Davis, V. A.; Lee, D. C.; Korgel, B. A. Rheol. Acta 2009, 48, 589-596
26. Czogalla, A.; Petrov, E. P.; Kauert, D. J.; Uzunova, V.; Zhang, Y.; Seidel, R.; Schwille, P. Faraday Discuss. 2013, 161, 31-43
27. Herold, C. PhD Thesis, Technische Universität Dresden, Dresden, 2012.
28. Lahtinen, J. M.; Hjelt, T.; Ala-Nissila, T.; Chvoj, Z. Phys. Rev. E 2001, 64, 021204
29. Maeda, H.; Maeda, Y. Nano Lett. 2007, 7, 3329-3335
30. Zheng, Z.; Han, Y. J. Chem. Phys. 2010, 133, 124509
31. Zheng, Z.; Wang, F.; Han, Y. Phys. Rev. Lett. 2011, 107, 065702
32. Saccà, B.; Niemeyer, C. M. Angew. Chem., Int. Ed. 2012, 51, 58-66
33. Rothemund, P. W. Nature 2006, 440, 297-302
34. Castro, C. E.; Kilchherr, F.; Kim, D. N.; Shiao, E. L.; Wauer, T.; Wortmann, P.; Bathe, M.; Dietz, H. Nat. Methods 2011, 8, 221-229
35. Dietz, H.; Douglas, S. M.; Shih, W. M. Science 2009, 325, 725-730
36. Jahn, K.; Torring, T.; Voigt, N. V.; Sorensen, R. S.; Bank Kodal, A. L.; Andersen, E. S.; Gothelf, K. V.; Kjems, J. Bioconjugate Chem. 2011, 22, 819-823
37. Simmel, F. C. Curr. Opin. Biotechnol. 2012, 23, 516-521
38. Börjesson, K.; Lundberg, E.; Woller, J.; Nordén, B.; Albinsson, B. Angew. Chem., Int. Ed. 2011, 50, 8312-8315
39. Langecker, J.; Arnaut, M. V.; Martin, T. G.; List, J.; Renner, S.; Mayer, M.; Dietz, H.; Simmel, F. C. Science 2012, 338, 932-936
40. List, J.; Wever, M.; Simmel, F. Angew. Chem., Int. Ed. 2014, 53, 4236-4239
41. Johnson-Buck, A.; Jiang, S.; Yan, H.; Walter, N. G. ACS Nano 2014, 8, 5641-5649
42. Conway, J. W.; Madwar, C.; Edwardson, T. G.; McLaughlin, C. K.; Fahkoury, J.; Lennox, R. B.; Sleiman, H. F. J. Am. Chem. Soc. 2014, 136, 12987-12997
43. Kauert, D. J.; Kurth, T.; Liedl, T.; Seidel, R. Nano Lett. 2011, 11, 5558-5563
44. Pfeiffer, I.; Hook, F. J. Am. Chem. Soc. 2004, 126, 10224-10225
45. Bunge, A.; Loew, M.; Pescador, P.; Arbuzova, A.; Brodersen, N.; Kang, J.; Dahne, L.; Liebscher, J.; Herrmann, A.; Stengel, G.; Huster, D. J. Phys. Chem. B 2009, 113, 16425-16434
46. Angelova, M.; Dimitrov, D. S. Prog. Colloid Polym. Sci. 1988, 76, 59-67
47. Petrov, E. P.; Schwille, P. In Standardization and Quality Assurance in Fluorescence Measurements II: Bioanalytical and Biomedical Applications; Resch-Genger, U., Ed.; Springer Series on Fluorescence, Springer: Berlin, 2008; Vol. 6, pp 145-197.
48. Levine, A. J.; Liverpool, T. B.; MacKintosh, F. C. Phys. Rev. Lett. 2004, 93, 038102
49. Fischer, T. M. J. Fluid Mech. 2004, 498, 123-137
50. Tao, Y. G.; den Otter, W. K.; Dhont, J. K.; Briels, W. J. J. Chem. Phys. 2006, 124, 134906