Rice SNF2 family helicase ENL1 is essential for syncytial endosperm development

Plant Journal

Volumn 81, Issue 1, 2015, Pages 1-12

  Hara, Tomomi ^a   Katoh, Hirokazu ^a   Ogawa, Daisuke ^a   Kagaya, Yasuaki ^b   Sato, Yutaka ^a   Kitano, Hidemi ^a   Nagato, Yasuo ^c   Ishikawa, Ryo ^d   Ono, Akemi ^e   Kinoshita, Tetsu ^e   Takeda, Shin ^a   Hattori, Tsukaho ^a  

^a NAGOYA UNIVERSITY   (Japan)

^b MIE UNIVERSITY   (Japan)

^c UNIVERSITY OF TOKYO   (Japan)

^d KOBE UNIVERSITY   (Japan)

^e YOKOHAMA CITY UNIVERSITY   (Japan)

Author keywords

chromosome; Oryza sativa; PICH; seed; syncytium

Indexed keywords

CHROMOSOMES; CYTOLOGY; PROTEINS;

ENDOSPERM DEVELOPMENT; ENHANCED YELLOW FLUORESCENT PROTEINS; MARGINAL EFFECTS; MOLECULAR IDENTIFICATION; ORYZA SATIVA; PICH; PLANT DEVELOPMENT; SYNCYTIUM;

SEED;

ARABIDOPSIS; EUKARYOTA; ORYZA SATIVA;

DNA HELICASE; MESSENGER RNA; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; CHROMOSOME SEGREGATION; EMBRYOLOGY; ENDOSPERM; ENZYMOLOGY; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MITOSIS; MOLECULAR GENETICS; MUTATION; PHYLOGENY; PHYSIOLOGY; RICE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

AMINO ACID SEQUENCE; CHROMOSOME SEGREGATION; DNA HELICASES; ENDOSPERM; MITOSIS; MOLECULAR SEQUENCE DATA; MUTATION; ORYZA SATIVA; PHYLOGENY; PLANT PROTEINS; RNA, MESSENGER; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN;

EID: 84920169601     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12705     Document Type: Article

References (42)

1. An, S., Park, S., Jeong, D.-H., et al. (2003) Generation and analysis of end sequence database for T-DNA tagging lines in rice. Plant Physiol. 133, 2040-2047.
2. Baumann, C., Körner, R., Hofmann, K., and, Nigg, E.A., (2007) PICH, a centromere-associated SNF2 family ATPase, is regulated by Plk1 and required for the spindle checkpoint. Cell, 128, 101-114.
3. Berger, F., FitzGerald, J.N., and, Ingouff, M., (2007) Arabidopsis as a model for understanding the basics of endosperm development. In Endosperm: Developmental and Molecular Biology, Vol. 8 (, Olsen, O.-A., ed.). Berlin, Heidelberg: Springer-Verlag, pp. 91-110.
4. Chan, K.L., North, P.S., and, Hickson, I.D., (2007) BLM is required for faithful chromosome segregation and its localization defines a class of ultrafine anaphase bridges. EMBO J. 26, 3397-3409.
5. Chan, A.P., Crabtree, J., Zhao, Q., et al. (2010) Draft genome sequence of the oilseed species Ricinus communis. Nat. Biotechnol. 28, 951-956.
6. Guo, J., Song, J., Wang, F., and, Zhang, X.S., (2007) Genome-wide identification and expression analysis of rice cell cycle genes. Plant Mol. Biol. 64, 349-360.
7. Guo, J., Wang, F., Song, J., Sun, W., and, Zhang, X.S., (2010) The expression of Orysa;CycB1;1 is essential for endosperm formation and causes embryo enlargement in rice. Planta, 231, 293-303.
8. Hehenberger, E., Kradolfer, D., and, Köhler, C., (2012) Endosperm cellularization defines an important developmental transition for embryo development. Development, 139, 2031-2039.
9. Hiei, Y., Ohta, S., Komari, T., and, Kumashiro, T., (1994) Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA. Plant J. 6, 271-282.
10. Hong, S.K., Kitano, H., Satoh, H., and, Nagato, Y., (1996) How is embryo size genetically regulated in rice? Development, 122, 2051-2058.
11. Huh, J.H., Bauer, M.J., Hsieh, T.F., and, Fischer, R., (2007) Endosperm gene imprinting and seed development. Curr. Opin. Genet. Dev. 17, 480-485.
12. Ishikawa, R., Ohnishi, T., Kinoshita, Y., Eiguchi, M., Kurata, N., and, Kinoshita, T., (2011) Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division. Plant J. 65, 798-806.
13. Jaillon, O., Aury, J.M., Noel, B., et al. (2007) The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature, 449, 463-467.
14. Jürgens, G., (2005) Cytokinesis in higher plants. Annu. Rev. Plant Biol. 56, 281-299.
15. Kageyama, Y., Fukuoka, H., Yamamoto, K., and, Takeda, G., (1991) The rice bearing endospermless grains; a novel mutant induced by gamma-irradiation of tetraploid rice (Oryza sativa L.). Japan. J. Breed. 41, 341-345.
16. Kang, I.H., Steffen, J.G., Portereiko, M.F., Lloyd, A., and, Drews, G.N., (2008) The AGL62 MADS domain protein regulates cellularization during endosperm development in Arabidopsis. Plant Cell, 20, 635-647.
17. Ke, Y., Huh, J.W., Warrington, R., Li, B., Wu, N., Leng, M., Zhang, J., Ball, H.L., and, Yu, H., (2011) PICH and BLM limit histone association with anaphase centromeric DNA threads and promote their resolution. EMBO J. 30, 3309-3321.
18. Knizewski, L., Ginalski, K., and, Jerzmanowski, A., (2008) Snf2 proteins in plants: gene silencing and beyond. Trends Plant Sci. 13, 557-565.
19. Kurasawa, Y., and, Yu-Lee, L.Y., (2010) PICH and cotargeted Plk1 coordinately maintain prometaphase chromosome arm architecture. Mol. Biol. Cell 21, 1188-1199.
20. Leng, M., Bessuso, D., Jung, S.Y., Wang, Y., and, Qin, J., (2008) Targeting Plk1 to chromosome arms and regulating chromosome compaction by the PICH ATPase. Cell Cycle, 7, 1480-1489.
21. Liu, C.M., and, Meinke, D.W., (1998) The titan mutants of Arabidopsis are disrupted in mitosis and cell cycle control during seed development. Plant J. 16, 21-31.
22. Liu, C.M., McElver, J., Tzafrir, I., Joosen, R., Wittich, P., Patton, D., Van Lammeren, A.A., and, Meinke, D., (2002) Condensin and cohesin knockouts in Arabidopsis exhibit a titan seed phenotype. Plant J. 29, 405-415.
23. Lopes, M.A., and, Larkins, B.A., (1993) Endosperm origin, development, and function. Plant Cell, 5, 1383-1399.
24. Lu, X., Drocco, J., and, Wieschaus, E.F., (2010) Cell cycle regulation via inter-nuclear communication during the early embryonic development of Drosophila melanogaster. Cell Cycle, 9, 2908-2910.
25. Luo, M., Dennis, E.S., Berger, F., Peacock, W.J., and, Chaudhury, A., (2005) MINISEED3 (MINI3), a WRKY family gene, and HAIKU2 (IKU2), a leucine-rich repeat (LRR) KINASE gene, are regulators of seed size in Arabidopsis. Proc. Natl Acad. Sci. USA 102, 17531-17536.
26. Mayer, U., Herzog, U., Berger, F., Inzé, D., and, Jürgens, G., (1999) Mutations in the pilz group genes disrupt the microtubule cytoskeleton and uncouple cell cycle progression from cell division in Arabidopsis embryo and endosperm. Eur. J. Cell Biol. 78, 100-108.
27. Mizutani, M., Naganuma, T., Tsutsumi, K., and, Saitoh, Y., (2010) The syncytium-specific expression of the Orysa;KRP3 CDK inhibitor: implication of its involvement in the cell cycle control in the rice (Oryza sativa L.) syncytial endosperm. J. Exp. Bot. 61, 791-798.
28. Nagamura, Y., Antonio, B.A., Sato, Y., et al. (2011) Rice TOGO Browser: a platform to retrieve integrated information on rice functional and applied genomics. Plant Cell Physiol. 52, 230-237.
29. Olsen, O.-A., (2007) Endosperm: Developmental and Molecular Biology. Berlin/Heidelberg: Springer-Verlag.
30. Paterson, A.H., Bowers, J.E., Bruggmann, R., et al. (2009) The Sorghum bicolor genome and the diversification of grasses. Nature, 457, 551-556.
31. Pignocchi, C., Minns, G.E., Nesi, N., Koumproglou, R., Kitsios, G., Benning, C., Lloyd, C.W., Doonan, J.H., and, Hills, M.J., (2009) ENDOSPERM DEFECTIVE1 Is a novel microtubule-associated protein essential for seed development in Arabidopsis. Plant Cell, 21, 90-105.
32. Sabelli, P.A., and, Larkins, B.A., (2009) The development of endosperm in grasses. Plant Physiol. 149, 14-26.
33. Sakurai, H., Okado, M., Ito, F., and, Kawasaki, K., (2011) Anaphase DNA bridges induced by lack of RecQ5 in Drosophila syncytial embryos. FEBS Lett. 585, 1923-1928.
34. Shaked, H., Avivi-Ragolsky, N., and, Levy, A.A., (2006) Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination. Genetics, 173, 985-994.
35. Steinborn, K., Maulbetsch, C., Priester, B., et al. (2002) The Arabidopsis PILZ group genes encode tubulin-folding cofactor orthologs required for cell division but not cell growth. Genes Dev. 16, 959-971.
36. Suzuki, K., Miyake, H., Taniguchi, T., and, Maeda, E., (2000) Cellularization of the free nuclear endosperm in rice caryopsis revealed by light and electron microscopy. Plant Prod. Sci. 3, 446-458.
37. Tamura, K., Dudley, J., Nei, M., and, Kumar, S., (2007) MEGA4: molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24, 1596-1599.
38. Tanaka, T., Antonio, B.A., Kikuchi, S., et al,. (2008) The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Res. 36, D1028-D1033.
39. Tuskan, G.A., Difazio, S., Jansson, S., et al. (2006) The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science, 313, 1596-1604.
40. Tzafrir, I., McElver, J.A., Liu Cm, C.M., Yang, L.J., Wu, J.Q., Martinez, A., Patton, D.A., and, Meinke, D.W., (2002) Diversity of TITAN functions in Arabidopsis seed development. Plant Physiol. 128, 38-51.
41. Vollbrecht, E., Reiser, L., and, Hake, S., (2000) Shoot meristem size is dependent on inbred background and presence of the maize homeobox gene, knotted1. Development, 127, 3161-3172.
42. Ware, D.H., Jaiswal, P., Ni, J., et al. (2002) Gramene, a tool for grass genomics. Plant Physiol. 130, 1606-1613.