-
1
-
-
84920174472
-
-
Antibiotic resistant threats in the United States . Centers for Disease Control and Prevention. Atlanta, GA.
-
Antibiotic resistant threats in the United States 2013. Centers for Disease Control and Prevention. Atlanta, GA.
-
(2013)
-
-
-
2
-
-
84857135712
-
In-feed antibiotic effects on the swine intestinal microbiome
-
Looft T, Johnson TA, Allen HK, Bayles DO, et al. 2012. In-feed antibiotic effects on the swine intestinal microbiome. Proc Natl Acad Sci USA 109: 1691-6.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 1691-1696
-
-
Looft, T.1
Johnson, T.A.2
Allen, H.K.3
Bayles, D.O.4
-
3
-
-
77955043924
-
The human microbiome harbors a diverse reservoir of antibiotic resistance genes
-
Sommer MO, Church GM, Dantas G. 2010. The human microbiome harbors a diverse reservoir of antibiotic resistance genes. Virulence 1: 299-303.
-
(2010)
Virulence
, vol.1
, pp. 299-303
-
-
Sommer, M.O.1
Church, G.M.2
Dantas, G.3
-
4
-
-
79952306616
-
Antibiotic resistance genes in the bacteriophage DNA fraction of environmental samples
-
Colomer-Lluch M, Jofre J, Muniesa M. 2011. Antibiotic resistance genes in the bacteriophage DNA fraction of environmental samples. PLoS One 6: e17549.
-
(2011)
PLoS One
, vol.6
, pp. e17549
-
-
Colomer-Lluch, M.1
Jofre, J.2
Muniesa, M.3
-
5
-
-
66649105857
-
Antibiotic-resistance profile in environmental bacteria isolated from penicillin production wastewater treatment plant and the receiving river
-
Li D, Yang M, Hu J, Zhang J, et al. 2009. Antibiotic-resistance profile in environmental bacteria isolated from penicillin production wastewater treatment plant and the receiving river. Environ Microbiol 11: 1506-7.
-
(2009)
Environ Microbiol
, vol.11
, pp. 1506-1507
-
-
Li, D.1
Yang, M.2
Hu, J.3
Zhang, J.4
-
7
-
-
84859439313
-
Broad diversity of conjugative plasmids in integron-carrying bacteria from wastewater environments
-
Moura A, Oliveira C, Henriques I, Smalla K, et al. 2012. Broad diversity of conjugative plasmids in integron-carrying bacteria from wastewater environments. FEMS Microbiol Lett 330: 157-64.
-
(2012)
FEMS Microbiol Lett
, vol.330
, pp. 157-164
-
-
Moura, A.1
Oliveira, C.2
Henriques, I.3
Smalla, K.4
-
8
-
-
77949568092
-
Call of the wild: antibiotic resistance genes in natural environments
-
Allen HK, Donato J, Wang HH, Cloud-Hansen KA, et al. 2010. Call of the wild: antibiotic resistance genes in natural environments. Nat Rev Microbiol 8: 251-9.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 251-259
-
-
Allen, H.K.1
Donato, J.2
Wang, H.H.3
Cloud-Hansen, K.A.4
-
9
-
-
69249205465
-
Environmental pollution by antibiotics and by antibiotic resistance determinants
-
Martinez JL. 2009. Environmental pollution by antibiotics and by antibiotic resistance determinants. Environ Pollut 157: 2893-902.
-
(2009)
Environ Pollut
, vol.157
, pp. 2893-2902
-
-
Martinez, J.L.1
-
10
-
-
42049087610
-
Influence of industrial contamination on mobile genetic elements: class 1 integron abundance and gene cassette structure in aquatic bacterial communities
-
Wright MS, Baker-Austin C, Lindell AH, Stepanauskas R, et al. 2008. Influence of industrial contamination on mobile genetic elements: class 1 integron abundance and gene cassette structure in aquatic bacterial communities. ISME J 2: 417-28.
-
(2008)
ISME J
, vol.2
, pp. 417-428
-
-
Wright, M.S.1
Baker-Austin, C.2
Lindell, A.H.3
Stepanauskas, R.4
-
11
-
-
84864374018
-
Integron involvement in environmental spread of antibiotic resistance
-
Stalder T, Barraud O, Casellas M, Dagot C, et al. 2012. Integron involvement in environmental spread of antibiotic resistance. Front Microbiol 3: 119.
-
(2012)
Front Microbiol
, vol.3
, pp. 119
-
-
Stalder, T.1
Barraud, O.2
Casellas, M.3
Dagot, C.4
-
12
-
-
79960313230
-
Lateral genetic transfer and the construction of genetic exchange communities
-
Skippington E, Ragan MA. 2011. Lateral genetic transfer and the construction of genetic exchange communities. FEMS Microbiol Rev 35: 707-35.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 707-735
-
-
Skippington, E.1
Ragan, M.A.2
-
13
-
-
84872574616
-
The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria
-
Wellington EM, Boxall AB, Cross P, Feil EJ, et al. 2013. The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria. Lancet Infect Dis 13: 155-65.
-
(2013)
Lancet Infect Dis
, vol.13
, pp. 155-165
-
-
Wellington, E.M.1
Boxall, A.B.2
Cross, P.3
Feil, E.J.4
-
14
-
-
0036721015
-
Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types
-
Humeniuk C, Arlet G, Gautier V, Grimont P, et al. 2002. Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types. Antimicrob Agents Chemother 46: 3045-9.
-
(2002)
Antimicrob Agents Chemother
, vol.46
, pp. 3045-3049
-
-
Humeniuk, C.1
Arlet, G.2
Gautier, V.3
Grimont, P.4
-
16
-
-
80053130409
-
Antibiotic resistance is ancient
-
D'Costa VM, King CE, Kalan L, Morar M, et al. 2011. Antibiotic resistance is ancient. Nature 477: 457-61.
-
(2011)
Nature
, vol.477
, pp. 457-461
-
-
D'Costa, V.M.1
King, C.E.2
Kalan, L.3
Morar, M.4
-
17
-
-
77957820588
-
Antibiotic resistance in the environment: a link to the clinic
-
Wright GD. 2010. Antibiotic resistance in the environment: a link to the clinic? Curr Opin Microbiol 13: 589-94.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 589-594
-
-
Wright, G.D.1
-
18
-
-
84859270554
-
Antibiotic resistance is ancient: implications for drug discovery
-
Wright GD, Poinar H. 2012. Antibiotic resistance is ancient: implications for drug discovery. Trends Microbiol 20: 157-9.
-
(2012)
Trends Microbiol
, vol.20
, pp. 157-159
-
-
Wright, G.D.1
Poinar, H.2
-
19
-
-
84880831180
-
Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota
-
Hu Y, Yang X, Qin J, Lu N, et al. 2013. Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota. Nat Commun 4: 2151.
-
(2013)
Nat Commun
, vol.4
, pp. 2151
-
-
Hu, Y.1
Yang, X.2
Qin, J.3
Lu, N.4
-
20
-
-
84880050412
-
Country-specific antibiotic use practices impact the human gut resistome
-
Forslund K, Sunagawa S, Kultima JR, Mende DR, et al. 2013. Country-specific antibiotic use practices impact the human gut resistome. Genome Res 23: 1163-9.
-
(2013)
Genome Res
, vol.23
, pp. 1163-1169
-
-
Forslund, K.1
Sunagawa, S.2
Kultima, J.R.3
Mende, D.R.4
-
21
-
-
84893760545
-
Metagenomic insights into the human gut resistome and the forces that shape it
-
Forslund K, Sunagawa S, Coelho LP, Bork P. 2014. Metagenomic insights into the human gut resistome and the forces that shape it. BioEssays 36: 316-29.
-
(2014)
BioEssays
, vol.36
, pp. 316-329
-
-
Forslund, K.1
Sunagawa, S.2
Coelho, L.P.3
Bork, P.4
-
22
-
-
4344587758
-
Uncultured soil bacteria are a reservoir of new antibiotic resistance genes
-
Riesenfeld CS, Goodman RM, Handelsman J. 2004. Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environ Microbiol 6: 981-9.
-
(2004)
Environ Microbiol
, vol.6
, pp. 981-989
-
-
Riesenfeld, C.S.1
Goodman, R.M.2
Handelsman, J.3
-
23
-
-
69549086653
-
Functional characterization of the antibiotic resistance reservoir in the human microflora
-
Sommer MO, Dantas G, Church GM. 2009. Functional characterization of the antibiotic resistance reservoir in the human microflora. Science 325: 1128-31.
-
(2009)
Science
, vol.325
, pp. 1128-1131
-
-
Sommer, M.O.1
Dantas, G.2
Church, G.M.3
-
24
-
-
84865531061
-
The shared antibiotic resistome of soil bacteria and human pathogens
-
Forsberg KJ, Reyes A, Wang B, Selleck EM, et al. 2012. The shared antibiotic resistome of soil bacteria and human pathogens. Science 337: 1107-11.
-
(2012)
Science
, vol.337
, pp. 1107-1111
-
-
Forsberg, K.J.1
Reyes, A.2
Wang, B.3
Selleck, E.M.4
-
25
-
-
84884222944
-
Novel resistance functions uncovered using functional metagenomic investigations of resistance reservoirs
-
Pehrsson EC, Forsberg KJ, Gibson MK, Ahmadi S, et al. 2013. Novel resistance functions uncovered using functional metagenomic investigations of resistance reservoirs. Front Microbiol 4: 145.
-
(2013)
Front Microbiol
, vol.4
, pp. 145
-
-
Pehrsson, E.C.1
Forsberg, K.J.2
Gibson, M.K.3
Ahmadi, S.4
-
26
-
-
70149086707
-
Mobilization of a Tn402-like class 1 integron with a novel cassette array via flanking miniature inverted-repeat transposable element-like structures
-
Gillings MR, Labbate M, Sajjad A, Giguere NJ, et al. 2009. Mobilization of a Tn402-like class 1 integron with a novel cassette array via flanking miniature inverted-repeat transposable element-like structures. Appl Environ Microbiol 75: 6002-4.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 6002-6004
-
-
Gillings, M.R.1
Labbate, M.2
Sajjad, A.3
Giguere, N.J.4
-
27
-
-
84901652050
-
Bacterial phylogeny structures soil resistomes across habitats
-
Forsberg KJ, Patel S, Gibson MK, Lauber CL, et al. 2014. Bacterial phylogeny structures soil resistomes across habitats. Nature 509: 612-6.
-
(2014)
Nature
, vol.509
, pp. 612-616
-
-
Forsberg, K.J.1
Patel, S.2
Gibson, M.K.3
Lauber, C.L.4
-
28
-
-
84859574738
-
Antibiotic resistance is prevalent in an isolated cave microbiome
-
Bhullar K, Waglechner N, Pawlowski A, Koteva K, et al. 2012. Antibiotic resistance is prevalent in an isolated cave microbiome. PLoS One 7: e34953.
-
(2012)
PLoS One
, vol.7
, pp. e34953
-
-
Bhullar, K.1
Waglechner, N.2
Pawlowski, A.3
Koteva, K.4
-
29
-
-
84861335957
-
Are humans increasing bacterial evolvability
-
Gillings MR, Stokes HW. 2012. Are humans increasing bacterial evolvability? Trends Ecol Evol 27: 346-52.
-
(2012)
Trends Ecol Evol
, vol.27
, pp. 346-352
-
-
Gillings, M.R.1
Stokes, H.W.2
-
30
-
-
83055186603
-
Ecology drives a global network of gene exchange connecting the human microbiome
-
Smillie CS, Smith MB, Friedman J, Cordero OX, et al. 2011. Ecology drives a global network of gene exchange connecting the human microbiome. Nature 480: 241-4.
-
(2011)
Nature
, vol.480
, pp. 241-244
-
-
Smillie, C.S.1
Smith, M.B.2
Friedman, J.3
Cordero, O.X.4
-
31
-
-
0036848573
-
The ecology of transfer of mobile genetic elements
-
van Elsas JD, Bailey MJ. 2002. The ecology of transfer of mobile genetic elements. FEMS Microbiol Ecol 42: 187-97.
-
(2002)
FEMS Microbiol Ecol
, vol.42
, pp. 187-197
-
-
van Elsas, J.D.1
Bailey, M.J.2
-
32
-
-
84855264889
-
Horizontal gene exchange in environmental microbiota
-
Aminov RI. 2011. Horizontal gene exchange in environmental microbiota. Front Microbiol 2: 158.
-
(2011)
Front Microbiol
, vol.2
, pp. 158
-
-
Aminov, R.I.1
-
34
-
-
84884228709
-
The antibiotic resistance "mobilome": searching for the link between environment and clinic
-
Perry JA, Wright GD. 2013. The antibiotic resistance "mobilome": searching for the link between environment and clinic. Front Microbiol 4: 138.
-
(2013)
Front Microbiol
, vol.4
, pp. 138
-
-
Perry, J.A.1
Wright, G.D.2
-
35
-
-
79960961566
-
Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches
-
Wiedenbeck J, Cohan FM. 2011. Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches. FEMS Microbiol Rev 35: 957-76.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 957-976
-
-
Wiedenbeck, J.1
Cohan, F.M.2
-
36
-
-
84921632491
-
Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology
-
in press
-
Gibson MK, Forsberg KJ, Dantas G. 2014. Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology. ISME J, in press, DOI:10.1038/ismej.2014.106.
-
(2014)
ISME J
-
-
Gibson, M.K.1
Forsberg, K.J.2
Dantas, G.3
-
37
-
-
84865832282
-
Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance
-
Cordero OX, Wildschutte H, Kirkup B, Proehl S, et al. 2012. Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance. Science 337: 1228-31.
-
(2012)
Science
, vol.337
, pp. 1228-1231
-
-
Cordero, O.X.1
Wildschutte, H.2
Kirkup, B.3
Proehl, S.4
-
39
-
-
0020645470
-
Conjugative plasmids in bacteria of the 'pre-antibiotic' era
-
Hughes VM, Datta N. 1983. Conjugative plasmids in bacteria of the 'pre-antibiotic' era. Nature 302: 725-6.
-
(1983)
Nature
, vol.302
, pp. 725-726
-
-
Hughes, V.M.1
Datta, N.2
-
40
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman H, Lawrence JG, Groisman EA. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
41
-
-
33947260230
-
Molecular mechanisms of antibacterial multidrug resistance
-
Alekshun MN, Levy SB. 2007. Molecular mechanisms of antibacterial multidrug resistance. Cell 128: 1037-50.
-
(2007)
Cell
, vol.128
, pp. 1037-1050
-
-
Alekshun, M.N.1
Levy, S.B.2
-
42
-
-
84874494333
-
Diverse and abundant antibiotic resistance genes in Chinese swine farms
-
Zhu YG, Johnson TA, Su JQ, Qiao M, et al. 2013. Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc Natl Acad Sci USA 110: 3435-40.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 3435-3440
-
-
Zhu, Y.G.1
Johnson, T.A.2
Su, J.Q.3
Qiao, M.4
-
43
-
-
79951882096
-
Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements
-
Kristiansson E, Fick J, Janzon A, Grabic R, et al. 2011. Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements. PLoS One 6: e17038.
-
(2011)
PLoS One
, vol.6
, pp. e17038
-
-
Kristiansson, E.1
Fick, J.2
Janzon, A.3
Grabic, R.4
-
44
-
-
84868578288
-
Correlation between upstream human activities and riverine antibiotic resistance genes
-
Pruden A, Arabi M, Storteboom HN. 2012. Correlation between upstream human activities and riverine antibiotic resistance genes. Environ Sci Technol 46: 11541-9.
-
(2012)
Environ Sci Technol
, vol.46
, pp. 11541-11549
-
-
Pruden, A.1
Arabi, M.2
Storteboom, H.N.3
-
45
-
-
69949162470
-
Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics
-
Szczepanowski R, Linke B, Krahn I, Gartemann KH, et al. 2009. Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics. Microbiology 155: 2306-19.
-
(2009)
Microbiology
, vol.155
, pp. 2306-2319
-
-
Szczepanowski, R.1
Linke, B.2
Krahn, I.3
Gartemann, K.H.4
-
46
-
-
34547345994
-
The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria
-
Ghosh S, LaPara TM. 2007. The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria. ISME J 1: 191-203.
-
(2007)
ISME J
, vol.1
, pp. 191-203
-
-
Ghosh, S.1
LaPara, T.M.2
-
47
-
-
79959306747
-
Antibiotic resistance gene spread due to manure application on agricultural fields
-
Heuer H, Schmitt H, Smalla K. 2011. Antibiotic resistance gene spread due to manure application on agricultural fields. Curr Opin Microbiol 14: 236-43.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 236-243
-
-
Heuer, H.1
Schmitt, H.2
Smalla, K.3
-
48
-
-
79960951300
-
Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens
-
Stokes HW, Gillings MR. 2011. Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens. FEMS Microbiol Rev 35: 790-819.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 790-819
-
-
Stokes, H.W.1
Gillings, M.R.2
-
49
-
-
84891783585
-
Balancing water sustainability and public health goals in the face of growing concerns about antibiotic resistance
-
Pruden A. 2014. Balancing water sustainability and public health goals in the face of growing concerns about antibiotic resistance. Environ Sci Technol 48: 5-14.
-
(2014)
Environ Sci Technol
, vol.48
, pp. 5-14
-
-
Pruden, A.1
-
50
-
-
84875825656
-
Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome
-
Gillings MR. 2013. Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome. Front Microbiol 4: 4.
-
(2013)
Front Microbiol
, vol.4
, pp. 4
-
-
Gillings, M.R.1
-
51
-
-
79956048989
-
Aquatic systems: maintaining, mixing and mobilising antimicrobial resistance
-
Taylor NG, Verner-Jeffreys DW, Baker-Austin C. 2011. Aquatic systems: maintaining, mixing and mobilising antimicrobial resistance? Trends Ecol Evol 26: 278-84.
-
(2011)
Trends Ecol Evol
, vol.26
, pp. 278-284
-
-
Taylor, N.G.1
Verner-Jeffreys, D.W.2
Baker-Austin, C.3
-
52
-
-
77953037744
-
Antibiotic resistance characteristics of environmental bacteria from an oxytetracycline production wastewater treatment plant and the receiving river
-
Li D, Yu T, Zhang Y, Yang M, et al. 2010. Antibiotic resistance characteristics of environmental bacteria from an oxytetracycline production wastewater treatment plant and the receiving river. Appl Environ Microbiol 76: 3444-51.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 3444-3451
-
-
Li, D.1
Yu, T.2
Zhang, Y.3
Yang, M.4
-
53
-
-
84864106081
-
Diversity of integron- and culture-associated antibiotic resistance genes in freshwater floc
-
Drudge CN, Elliott AV, Plach JM, Ejim LJ, et al. 2012. Diversity of integron- and culture-associated antibiotic resistance genes in freshwater floc. Appl Environ Microbiol 78: 4367-72.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 4367-4372
-
-
Drudge, C.N.1
Elliott, A.V.2
Plach, J.M.3
Ejim, L.J.4
-
54
-
-
84864585711
-
Plasmid-mediated quinolone resistance. Interactions between human, animal, and environmental ecologies
-
Poirel L, Cattoir V, Nordmann P. 2012. Plasmid-mediated quinolone resistance. Interactions between human, animal, and environmental ecologies. Front Microbiol 3: 24.
-
(2012)
Front Microbiol
, vol.3
, pp. 24
-
-
Poirel, L.1
Cattoir, V.2
Nordmann, P.3
|