-
1
-
-
33748535101
-
Shotgun proteomics using the iTRAQ isobaric tags
-
COI: 1:CAS:528:DC%2BD28XhtVSrsLfE, PID: 16772272
-
Aggarwal K, Choe LH, Lee KH (2006) Shotgun proteomics using the iTRAQ isobaric tags. Brief Funct Genomic Proteomic 5:112–120
-
(2006)
Brief Funct Genomic Proteomic
, vol.5
, pp. 112-120
-
-
Aggarwal, K.1
Choe, L.H.2
Lee, K.H.3
-
2
-
-
67651094043
-
Transcript profiling during fiber development identifies pathways in secondary metabolism and cell wall structure that may contribute to cotton fiber quality
-
COI: 1:CAS:528:DC%2BD1MXovVCit70%3D, PID: 19520671
-
Al-Ghazi Y, Bourot S, Arioli T, Dennis ES, Llewellyn DJ (2009) Transcript profiling during fiber development identifies pathways in secondary metabolism and cell wall structure that may contribute to cotton fiber quality. Plant Cell Physiol 50:1364–1381
-
(2009)
Plant Cell Physiol
, vol.50
, pp. 1364-1381
-
-
Al-Ghazi, Y.1
Bourot, S.2
Arioli, T.3
Dennis, E.S.4
Llewellyn, D.J.5
-
3
-
-
0029073522
-
A membrane-associated form of sucrose synthase and its potential role in synthesis of cellulose and callose in plants
-
COI: 1:CAS:528:DyaK2MXosVWlur8%3D, PID: 7568131
-
Amor Y, Haigler CH, Johnson S, Wainscott M, Delmer DP (1995) A membrane-associated form of sucrose synthase and its potential role in synthesis of cellulose and callose in plants. Proc Natl Acad Sci USA 92:9353–9357
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 9353-9357
-
-
Amor, Y.1
Haigler, C.H.2
Johnson, S.3
Wainscott, M.4
Delmer, D.P.5
-
4
-
-
0035125079
-
Comparative development of fiber in wild and cultivated cotton
-
COI: 1:STN:280:DC%2BD3M3gs1GhtQ%3D%3D, PID: 11256432
-
Applequist WL, Cronn R, Wendel JF (2001) Comparative development of fiber in wild and cultivated cotton. Evol Dev 3:3–17
-
(2001)
Evol Dev
, vol.3
, pp. 3-17
-
-
Applequist, W.L.1
Cronn, R.2
Wendel, J.F.3
-
5
-
-
84862925875
-
Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium)
-
COI: 1:CAS:528:DC%2BC38XnvVGhsQ%3D%3D, PID: 22160709
-
Bao Y, Hu G, Flagel LE, Salmon A, Bezanilla M, Paterson AH, Wang Z, Wendel JF (2011) Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium). Proc Natl Acad Sci USA 108:21152–21157
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 21152-21157
-
-
Bao, Y.1
Hu, G.2
Flagel, L.E.3
Salmon, A.4
Bezanilla, M.5
Paterson, A.H.6
Wang, Z.7
Wendel, J.F.8
-
6
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
Benjamini Y, Yekutieli D (2001) The control of the false discovery rate in multiple testing under dependency. Ann Stat 29:1165–1188
-
(2001)
Ann Stat
, vol.29
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
7
-
-
0006922663
-
Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana
-
COI: 1:CAS:528:DyaK1cXhtVCjtr4%3D, PID: 9461215
-
Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W et al (1998) Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 391:485–488
-
(1998)
Nature
, vol.391
, pp. 485-488
-
-
Bevan, M.1
Bancroft, I.2
Bent, E.3
Love, K.4
Goodman, H.5
Dean, C.6
Bergkamp, R.7
Dirkse, W.8
-
8
-
-
0027951393
-
Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs)
-
Brubaker CL, Wendel JF (1994) Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs). Am J Bot 81:1309–1326
-
(1994)
Am J Bot
, vol.81
, pp. 1309-1326
-
-
Brubaker, C.L.1
Wendel, J.F.2
-
9
-
-
38849163444
-
Molecular insights into the evolution of crop plants
-
PID: 21632337
-
Burger JC, Chapman MA, Burke JM (2008) Molecular insights into the evolution of crop plants. Am J Bot 95:113–122
-
(2008)
Am J Bot
, vol.95
, pp. 113-122
-
-
Burger, J.C.1
Chapman, M.A.2
Burke, J.M.3
-
10
-
-
36549050856
-
Crop evolution: from genetics to genomics
-
COI: 1:CAS:528:DC%2BD2sXhsVWisbzL, PID: 17933510
-
Burke JM, Burger JC, Chapman MA (2007) Crop evolution: from genetics to genomics. Curr Opin Genet Dev 17:525–532
-
(2007)
Curr Opin Genet Dev
, vol.17
, pp. 525-532
-
-
Burke, J.M.1
Burger, J.C.2
Chapman, M.A.3
-
11
-
-
51249089213
-
Global analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense
-
COI: 1:CAS:528:DC%2BD1cXhtF2mtb%2FO, PID: 18803775
-
Chaudhary B, Hovav R, Rapp R, Verma N, Udall JA, Wendel JF (2008) Global analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense. Evol Dev 10:567–582
-
(2008)
Evol Dev
, vol.10
, pp. 567-582
-
-
Chaudhary, B.1
Hovav, R.2
Rapp, R.3
Verma, N.4
Udall, J.A.5
Wendel, J.F.6
-
12
-
-
69549112933
-
Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium)
-
Chaudhary B, Hovav R, Flagel L, Mittler R, Wendel JF (2009) Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium). BMC Genom 10:378
-
(2009)
BMC Genom
, vol.10
, pp. 378
-
-
Chaudhary, B.1
Hovav, R.2
Flagel, L.3
Mittler, R.4
Wendel, J.F.5
-
13
-
-
33750588336
-
Advances in plant proteomics
-
COI: 1:CAS:528:DC%2BD28XhtFyms7bK, PID: 16972296
-
Chen S, Harmon AC (2006) Advances in plant proteomics. Proteomics 6:5504–5516
-
(2006)
Proteomics
, vol.6
, pp. 5504-5516
-
-
Chen, S.1
Harmon, A.C.2
-
14
-
-
84862200100
-
Analyses of the sucrose synthase gene family in cotton: structure, phylogeny and expression patterns
-
COI: 1:CAS:528:DC%2BC3sXot1Wltrg%3D, PID: 22694895
-
Chen A, He S, Li F, Li Z, Ding M, Liu Q, Rong J (2012) Analyses of the sucrose synthase gene family in cotton: structure, phylogeny and expression patterns. BMC Plant Biol 12:85
-
(2012)
BMC Plant Biol
, vol.12
, pp. 85
-
-
Chen, A.1
He, S.2
Li, F.3
Li, Z.4
Ding, M.5
Liu, Q.6
Rong, J.7
-
15
-
-
33646570847
-
Isobaric tags for relative and absolute quantitation (iTRAQ) reproducibility: implication of multiple injections
-
COI: 1:CAS:528:DC%2BD28XivVChtLo%3D, PID: 16674113
-
Chong PK, Gan CS, Pham TK, Wright PC (2006) Isobaric tags for relative and absolute quantitation (iTRAQ) reproducibility: implication of multiple injections. J Proteome Res 5:1232–1240
-
(2006)
J Proteome Res
, vol.5
, pp. 1232-1240
-
-
Chong, P.K.1
Gan, C.S.2
Pham, T.K.3
Wright, P.C.4
-
17
-
-
84857632275
-
Proteomics in evolutionary ecology: linking the genotype with the phenotype
-
COI: 1:CAS:528:DC%2BC38XlvFGlsLk%3D, PID: 22268916
-
Diz AP, Martinez-Fernandez M, Rolan-Alvarez E (2012) Proteomics in evolutionary ecology: linking the genotype with the phenotype. Mol Ecol 21:1060–1080
-
(2012)
Mol Ecol
, vol.21
, pp. 1060-1080
-
-
Diz, A.P.1
Martinez-Fernandez, M.2
Rolan-Alvarez, E.3
-
18
-
-
33845618112
-
The molecular genetics of crop domestication
-
COI: 1:CAS:528:DC%2BD2sXmvVyluw%3D%3D, PID: 17190597
-
Doebley JF, Gaut BS, Smith BD (2006) The molecular genetics of crop domestication. Cell 127:1309–1321
-
(2006)
Cell
, vol.127
, pp. 1309-1321
-
-
Doebley, J.F.1
Gaut, B.S.2
Smith, B.D.3
-
19
-
-
77954299992
-
agriGO: a GO analysis toolkit for the agricultural community
-
COI: 1:CAS:528:DC%2BC3cXotVSqtL0%3D, PID: 20435677
-
Du Z, Zhou X, Ling Y, Zhang Z, Su Z (2010) agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Res 38:W64–W70
-
(2010)
Nucleic Acids Res
, vol.38
, pp. W64-W70
-
-
Du, Z.1
Zhou, X.2
Ling, Y.3
Zhang, Z.4
Su, Z.5
-
20
-
-
67649842595
-
Molecular and biochemical evidence for phenylpropanoid synthesis and presence of wall-linked phenolics in cotton fibers
-
COI: 1:CAS:528:DC%2BD1MXptlOisLg%3D, PID: 19566641
-
Fan L, Shi WJ, Hu WR, Hao XY, Wang DM, Yuan H, Yan HY (2009) Molecular and biochemical evidence for phenylpropanoid synthesis and presence of wall-linked phenolics in cotton fibers. J Integr Plant Biol 51:626–637
-
(2009)
J Integr Plant Biol
, vol.51
, pp. 626-637
-
-
Fan, L.1
Shi, W.J.2
Hu, W.R.3
Hao, X.Y.4
Wang, D.M.5
Yuan, H.6
Yan, H.Y.7
-
21
-
-
34447570967
-
A review of quantitative methods for proteomic studies
-
COI: 1:CAS:528:DC%2BD2sXotVGnu7c%3D, PID: 17161666
-
Fenselau C (2007) A review of quantitative methods for proteomic studies. J Chromatogr B Analyt Technol Biomed Life Sci 855:14–20
-
(2007)
J Chromatogr B Analyt Technol Biomed Life Sci
, vol.855
, pp. 14-20
-
-
Fenselau, C.1
-
22
-
-
0002294353
-
Questions and answers #14
-
Fisher RA (1948) Questions and answers #14. Am Stat 2:30–31
-
(1948)
Am Stat
, vol.2
, pp. 30-31
-
-
Fisher, R.A.1
-
23
-
-
77956463857
-
Genetic perspectives on crop domestication
-
COI: 1:CAS:528:DC%2BC3cXhtFGjurnM, PID: 20541451
-
Gross BL, Olsen KM (2010) Genetic perspectives on crop domestication. Trends Plant Sci 15:529–537
-
(2010)
Trends Plant Sci
, vol.15
, pp. 529-537
-
-
Gross, B.L.1
Olsen, K.M.2
-
24
-
-
84871436735
-
Cotton fiber: a powerful single-cell model for cell wall and cellulose research
-
COI: 1:CAS:528:DC%2BC38XptFams7g%3D, PID: 22661979
-
Haigler CH, Betancur L, Stiff MR, Tuttle JR (2012) Cotton fiber: a powerful single-cell model for cell wall and cellulose research. Front Plant Sci 3:104
-
(2012)
Front Plant Sci
, vol.3
, pp. 104
-
-
Haigler, C.H.1
Betancur, L.2
Stiff, M.R.3
Tuttle, J.R.4
-
25
-
-
80053607426
-
Plant dehydrins and stress tolerance: versatile proteins for complex mechanisms
-
COI: 1:CAS:528:DC%2BC38XjsVGhsL4%3D, PID: 21897131
-
Hanin M, Brini F, Ebel C, Toda Y, Takeda S, Masmoudi K (2011) Plant dehydrins and stress tolerance: versatile proteins for complex mechanisms. Plant Signal Behav 6:1503–1509
-
(2011)
Plant Signal Behav
, vol.6
, pp. 1503-1509
-
-
Hanin, M.1
Brini, F.2
Ebel, C.3
Toda, Y.4
Takeda, S.5
Masmoudi, K.6
-
26
-
-
40149095290
-
The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism
-
PID: 18248099
-
Hovav R, Udall JA, Chaudhary B, Hovav E, Flagel L, Hu G, Wendel JF (2008) The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism. PLoS Genet 4:e25
-
(2008)
PLoS Genet
, vol.4
, pp. e25
-
-
Hovav, R.1
Udall, J.A.2
Chaudhary, B.3
Hovav, E.4
Flagel, L.5
Hu, G.6
Wendel, J.F.7
-
27
-
-
81255175641
-
Genomically biased accumulation of seed storage proteins in allopolyploid cotton
-
COI: 1:CAS:528:DC%2BC38XitFeqtL0%3D, PID: 21900265
-
Hu G, Houston NL, Pathak D, Schmidt L, Thelen JJ, Wendel JF (2011) Genomically biased accumulation of seed storage proteins in allopolyploid cotton. Genetics 189:1103–1115
-
(2011)
Genetics
, vol.189
, pp. 1103-1115
-
-
Hu, G.1
Houston, N.L.2
Pathak, D.3
Schmidt, L.4
Thelen, J.J.5
Wendel, J.F.6
-
28
-
-
84884411859
-
Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense
-
COI: 1:CAS:528:DC%2BC3sXhsV2ntrrN, PID: 23795774
-
Hu G, Koh J, Yoo MJ, Grupp K, Chen S, Wendel JF (2013) Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense. New Phytol 200:570–582
-
(2013)
New Phytol
, vol.200
, pp. 570-582
-
-
Hu, G.1
Koh, J.2
Yoo, M.J.3
Grupp, K.4
Chen, S.5
Wendel, J.F.6
-
29
-
-
84865547600
-
Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents
-
COI: 1:CAS:528:DC%2BC38Xht1Cis7fN, PID: 22861377
-
Koh J, Chen S, Zhu N, Yu F, Soltis PS, Soltis DE (2012) Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents. New Phytol 196:292–305
-
(2012)
New Phytol
, vol.196
, pp. 292-305
-
-
Koh, J.1
Chen, S.2
Zhu, N.3
Yu, F.4
Soltis, P.S.5
Soltis, D.E.6
-
30
-
-
33750579881
-
Comparing 2-D electrophoretic gels across internet databases
-
Walker J, (ed), Humana Press, Totowa:
-
Lemkin PF, Thornwall GC, Evans J (2005) Comparing 2-D electrophoretic gels across internet databases. In: Walker J (ed) The proteomics protocols handbook. Humana Press, Totowa, pp 279–306
-
(2005)
The proteomics protocols handbook
, pp. 279-306
-
-
Lemkin, P.F.1
Thornwall, G.C.2
Evans, J.3
-
31
-
-
34447527510
-
A cotton ascorbate peroxidase is involved in hydrogen peroxide homeostasis during fibre cell development
-
COI: 1:CAS:528:DC%2BD2sXpvFSqsL8%3D, PID: 17635221
-
Li HB, Qin YM, Pang Y, Song WQ, Mei WQ, Zhu YX (2007) A cotton ascorbate peroxidase is involved in hydrogen peroxide homeostasis during fibre cell development. New Phytol 175:462–471
-
(2007)
New Phytol
, vol.175
, pp. 462-471
-
-
Li, H.B.1
Qin, Y.M.2
Pang, Y.3
Song, W.Q.4
Mei, W.Q.5
Zhu, Y.X.6
-
32
-
-
46649110750
-
Characterization and expression of plasma and tonoplast membrane aquaporins in elongating cotton fibers
-
COI: 1:CAS:528:DC%2BD1cXotVyks7k%3D, PID: 18392624
-
Liu D, Tu L, Wang L, Li Y, Zhu L, Zhang X (2008) Characterization and expression of plasma and tonoplast membrane aquaporins in elongating cotton fibers. Plant Cell Rep 27:1385–1394
-
(2008)
Plant Cell Rep
, vol.27
, pp. 1385-1394
-
-
Liu, D.1
Tu, L.2
Wang, L.3
Li, Y.4
Zhu, L.5
Zhang, X.6
-
33
-
-
84355166588
-
Comparative proteomic analysis reveals the mechanisms governing cotton fiber differentiation and initiation
-
COI: 1:CAS:528:DC%2BC3MXhs1Omtr3O, PID: 22015716
-
Liu K, Han M, Zhang C, Yao L, Sun J, Zhang T (2012) Comparative proteomic analysis reveals the mechanisms governing cotton fiber differentiation and initiation. J Proteomics 75:845–856
-
(2012)
J Proteomics
, vol.75
, pp. 845-856
-
-
Liu, K.1
Han, M.2
Zhang, C.3
Yao, L.4
Sun, J.5
Zhang, T.6
-
34
-
-
75549084894
-
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
-
COI: 1:CAS:528:DC%2BC3cXktlOktQ%3D%3D, PID: 20015972
-
Mi H, Dong Q, Muruganujan A, Gaudet P, Lewis S, Thomas PD (2010) PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium. Nucleic Acids Res 38:D204–D210
-
(2010)
Nucleic Acids Res
, vol.38
, pp. D204-D210
-
-
Mi, H.1
Dong, Q.2
Muruganujan, A.3
Gaudet, P.4
Lewis, S.5
Thomas, P.D.6
-
35
-
-
84877677216
-
A bountiful harvest: genomic insights into crop domestication phenotypes
-
COI: 1:CAS:528:DC%2BC3sXosFSktrY%3D, PID: 23451788
-
Olsen KM, Wendel JF (2013a) A bountiful harvest: genomic insights into crop domestication phenotypes. Annu Rev Plant Biol 64:47–70
-
(2013)
Annu Rev Plant Biol
, vol.64
, pp. 47-70
-
-
Olsen, K.M.1
Wendel, J.F.2
-
36
-
-
84892791391
-
Crop plants as models for understanding plant adaptation and diversification
-
Olsen KM, Wendel JF (2013b) Crop plants as models for understanding plant adaptation and diversification. Front Plant Sci 4:1–16
-
(2013)
Front Plant Sci
, vol.4
, pp. 1-16
-
-
Olsen, K.M.1
Wendel, J.F.2
-
37
-
-
77956554550
-
Comparative proteomics indicates that biosynthesis of pectic precursors is important for cotton fiber and Arabidopsis root hair elongation
-
COI: 1:CAS:528:DC%2BC3cXhtlegt7bF, PID: 20525998
-
Pang CY, Wang H, Pang Y, Xu C, Jiao Y, Qin YM, Western TL, Yu SX, Zhu YX (2010) Comparative proteomics indicates that biosynthesis of pectic precursors is important for cotton fiber and Arabidopsis root hair elongation. Mol Cell Proteomics 9:2019–2033
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 2019-2033
-
-
Pang, C.Y.1
Wang, H.2
Pang, Y.3
Xu, C.4
Jiao, Y.5
Qin, Y.M.6
Western, T.L.7
Yu, S.X.8
Zhu, Y.X.9
-
38
-
-
16344386197
-
Polyploidy, evolutionary opportunity, and crop adaptation. Genetics of adaptation
-
COI: 1:CAS:528:DC%2BD2MXitFert7Y%3D, PID: 15881691
-
Paterson AH (2005) Polyploidy, evolutionary opportunity, and crop adaptation. Genetics of adaptation. Genetica 123:191–196
-
(2005)
Genetica
, vol.123
, pp. 191-196
-
-
Paterson, A.H.1
-
39
-
-
78149432467
-
Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication
-
PID: 21078138
-
Rapp RA, Haigler CH, Flagel L, Hovav RH, Udall JA, Wendel JF (2010) Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication. BMC Biol 8:139
-
(2010)
BMC Biol
, vol.8
, pp. 139
-
-
Rapp, R.A.1
Haigler, C.H.2
Flagel, L.3
Hovav, R.H.4
Udall, J.A.5
Wendel, J.F.6
-
40
-
-
4544265213
-
Tackling the plant proteome: practical approaches, hurdles and experimental tools
-
COI: 1:CAS:528:DC%2BD2cXos1ylt70%3D, PID: 15315634
-
Rose JK, Bashir S, Giovannoni JJ, Jahn MM, Saravanan RS (2004) Tackling the plant proteome: practical approaches, hurdles and experimental tools. Plant J 39:715–733
-
(2004)
Plant J
, vol.39
, pp. 715-733
-
-
Rose, J.K.1
Bashir, S.2
Giovannoni, J.J.3
Jahn, M.M.4
Saravanan, R.S.5
-
41
-
-
15944421277
-
The delayed initiation and slow elongation of fuzz-like short fibre cells in relation to altered patterns of sucrose synthase expression and plasmodesmata gating in a lintless mutant of cotton
-
COI: 1:CAS:528:DC%2BD2MXit1Knurk%3D, PID: 15710635
-
Ruan YL, Llewellyn DJ, Furbank RT, Chourey PS (2005) The delayed initiation and slow elongation of fuzz-like short fibre cells in relation to altered patterns of sucrose synthase expression and plasmodesmata gating in a lintless mutant of cotton. J Exp Bot 56:977–984
-
(2005)
J Exp Bot
, vol.56
, pp. 977-984
-
-
Ruan, Y.L.1
Llewellyn, D.J.2
Furbank, R.T.3
Chourey, P.S.4
-
42
-
-
0038799706
-
Localization of sucrose synthase and callose in freeze-substituted secondary-wall-stage cotton fibers
-
COI: 1:CAS:528:DC%2BD3sXksFWmtr4%3D, PID: 12802624
-
Salnikov VV, Grimson MJ, Seagull RW, Haigler CH (2003) Localization of sucrose synthase and callose in freeze-substituted secondary-wall-stage cotton fibers. Protoplasma 221:175–184
-
(2003)
Protoplasma
, vol.221
, pp. 175-184
-
-
Salnikov, V.V.1
Grimson, M.J.2
Seagull, R.W.3
Haigler, C.H.4
-
43
-
-
34848889259
-
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
COI: 1:CAS:528:DC%2BD2sXhtVGqsr3N, PID: 17533153
-
Shilov IV, Seymour SL, Patel AA, Loboda A, Tang WH, Keating SP, Hunter CL, Nuwaysir LM, Schaeffer DA (2007) The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol Cell Proteomics 6:1638–1655
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
Hunter, C.L.7
Nuwaysir, L.M.8
Schaeffer, D.A.9
-
44
-
-
84896701977
-
Recent advances in cotton fiber development
-
Oosterhuis DM, Cothren JT, (eds), The Cotton Foundation, Tennessee:
-
Stiff RM, Haigler HC (2012) Recent advances in cotton fiber development. In: Oosterhuis DM, Cothren JT (eds) Flowering and fruiting in cotton. The Cotton Foundation, Tennessee, pp 163–192
-
(2012)
Flowering and fruiting in cotton
, pp. 163-192
-
-
Stiff, R.M.1
Haigler, H.C.2
-
45
-
-
33745612095
-
Pvclust: an R package for assessing the uncertainty in hierarchical clustering
-
COI: 1:CAS:528:DC%2BD28XmsVensLg%3D, PID: 16595560
-
Suzuki R, Shimodaira H (2006) Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22:1540–1542
-
(2006)
Bioinformatics
, vol.22
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
46
-
-
84877030946
-
A genetic and metabolic analysis revealed that cotton fiber cell development was retarded by flavonoid naringenin
-
COI: 1:CAS:528:DC%2BC3sXnvVWksr4%3D, PID: 23535943
-
Tan J, Tu L, Deng F, Hu H, Nie Y, Zhang X (2013) A genetic and metabolic analysis revealed that cotton fiber cell development was retarded by flavonoid naringenin. Plant Physiol 162:86–95
-
(2013)
Plant Physiol
, vol.162
, pp. 86-95
-
-
Tan, J.1
Tu, L.2
Deng, F.3
Hu, H.4
Nie, Y.5
Zhang, X.6
-
47
-
-
55249121202
-
Nonlinear fitting method for determining local false discovery rates from decoy database searches
-
COI: 1:CAS:528:DC%2BD1cXpvVWksr0%3D, PID: 18700793
-
Tang WH, Shilov IV, Seymour SL (2008) Nonlinear fitting method for determining local false discovery rates from decoy database searches. J Proteome Res 7:3661–3667
-
(2008)
J Proteome Res
, vol.7
, pp. 3661-3667
-
-
Tang, W.H.1
Shilov, I.V.2
Seymour, S.L.3
-
48
-
-
37849025862
-
Quantitative proteomics in plants: choices in abundance
-
COI: 1:CAS:528:DC%2BD1cXns1ensw%3D%3D, PID: 18055608
-
Thelen JJ, Peck SC (2007) Quantitative proteomics in plants: choices in abundance. Plant Cell 19:3339–3346
-
(2007)
Plant Cell
, vol.19
, pp. 3339-3346
-
-
Thelen, J.J.1
Peck, S.C.2
-
49
-
-
33845574749
-
Polyploidy and crop improvement
-
Udall JA, Wendel JF (2006) Polyploidy and crop improvement. Crop Sci 46:S-3–S-14
-
(2006)
Crop Sci
, vol.46
, pp. 3-14
-
-
Udall, J.A.1
Wendel, J.F.2
-
50
-
-
34548356702
-
Applications and current challenges of proteomic approaches, focusing on two-dimensional electrophoresis
-
COI: 1:CAS:528:DC%2BD2sXpvVagsrs%3D, PID: 17136510
-
Vercauteren FG, Arckens L, Quirion R (2007) Applications and current challenges of proteomic approaches, focusing on two-dimensional electrophoresis. Amino Acids 33:405–414
-
(2007)
Amino Acids
, vol.33
, pp. 405-414
-
-
Vercauteren, F.G.1
Arckens, L.2
Quirion, R.3
-
51
-
-
77957732552
-
Evidence that high activity of vacuolar invertase Is required for cotton fiber and arabidopsis root elongation through osmotic dependent and independent pathways, respectively
-
COI: 1:CAS:528:DC%2BC3cXhtlCkt7jP, PID: 20699399
-
Wang L, Li X-R, Lian H, Ni D-A, He Y-k, Chen X-Y, Ruan Y-L (2010) Evidence that high activity of vacuolar invertase Is required for cotton fiber and arabidopsis root elongation through osmotic dependent and independent pathways, respectively. Plant Physiol 154:744–756
-
(2010)
Plant Physiol
, vol.154
, pp. 744-756
-
-
Wang, L.1
Li, X.-R.2
Lian, H.3
Ni, D.-A.4
He, Y.-K.5
Chen, X.-Y.6
Ruan, Y.-L.7
-
52
-
-
0001632947
-
New World tetraploid cottons contain Old World cytoplasm
-
COI: 1:CAS:528:DyaL1MXkvFCjsrg%3D, PID: 16594050
-
Wendel JF (1989) New World tetraploid cottons contain Old World cytoplasm. Proc Natl Acad Sci USA 86:4132–4136
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 4132-4136
-
-
Wendel, J.F.1
-
53
-
-
0000209673
-
Genetic diversity in Gossypium hirsutum and the origin of upland cotton
-
Wendel JF, Brubaker CL, Percival AE (1992) Genetic diversity in Gossypium hirsutum and the origin of upland cotton. Am J Bot 79:1291–1310
-
(1992)
Am J Bot
, vol.79
, pp. 1291-1310
-
-
Wendel, J.F.1
Brubaker, C.L.2
Percival, A.E.3
-
54
-
-
80053310467
-
The origin and evolution of Gossypium
-
Stewart JM, Oosterhuis DM, Heitholt JJ, Mauney JR, (eds), Springer, The Netherlands:
-
Wendel JF, Brubaker CL, Seelanan T (2010) The origin and evolution of Gossypium. In: Stewart JM, Oosterhuis DM, Heitholt JJ, Mauney JR (eds) Physiology of cotton. Springer, The Netherlands, pp 1–18
-
(2010)
Physiology of cotton
, pp. 1-18
-
-
Wendel, J.F.1
Brubaker, C.L.2
Seelanan, T.3
-
55
-
-
84949177358
-
Jeans, genes, and genomes: cotton as a model for studying polyploidy
-
Soltis PS, Soltis DE, (eds), Springer, Berlin, Heidelberg:
-
Wendel JF, Flagel LE, Adams KL (2012) Jeans, genes, and genomes: cotton as a model for studying polyploidy. In: Soltis PS, Soltis DE (eds) Polyploidy and genome evolution. Springer, Berlin, Heidelberg, pp 181–207
-
(2012)
Polyploidy and genome evolution
, pp. 181-207
-
-
Wendel, J.F.1
Flagel, L.E.2
Adams, K.L.3
-
56
-
-
33644845960
-
Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF
-
COI: 1:CAS:528:DC%2BD28XhtFSktL0%3D, PID: 16512681
-
Wu WW, Wang G, Baek SJ, Shen RF (2006) Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. J Proteome Res 5:651–658
-
(2006)
J Proteome Res
, vol.5
, pp. 651-658
-
-
Wu, W.W.1
Wang, G.2
Baek, S.J.3
Shen, R.F.4
-
57
-
-
58149387677
-
Comparative proteomic analysis provides new insights into the fiber elongating process in cotton
-
COI: 1:CAS:528:DC%2BD1cXhtFOktr%2FI, PID: 18823139
-
Yang YW, Bian SM, Yao Y, Liu JY (2008) Comparative proteomic analysis provides new insights into the fiber elongating process in cotton. J Proteome Res 7:4623–4637
-
(2008)
J Proteome Res
, vol.7
, pp. 4623-4637
-
-
Yang, Y.W.1
Bian, S.M.2
Yao, Y.3
Liu, J.Y.4
-
58
-
-
33845290242
-
An efficient protein preparation for proteomic analysis of developing cotton fibers by 2-DE
-
COI: 1:CAS:528:DC%2BD28XhtlCmsrnM, PID: 17058302
-
Yao Y, Yang YW, Liu JY (2006) An efficient protein preparation for proteomic analysis of developing cotton fibers by 2-DE. Electrophoresis 27:4559–4569
-
(2006)
Electrophoresis
, vol.27
, pp. 4559-4569
-
-
Yao, Y.1
Yang, Y.W.2
Liu, J.Y.3
-
59
-
-
84896726932
-
Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome
-
PID: 24391525
-
Yoo MJ, Wendel JF (2014) Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome. PLoS Genet 10:e1004073
-
(2014)
PLoS Genet
, vol.10
, pp. e1004073
-
-
Yoo, M.J.1
Wendel, J.F.2
-
60
-
-
84875880674
-
A high-confidence reference dataset of differentially expressed proteins in elongating cotton fiber cells
-
COI: 1:CAS:528:DC%2BC3sXivFektLw%3D, PID: 23349005
-
Zhang B, Yang YW, Zhang Y, Liu JY (2013) A high-confidence reference dataset of differentially expressed proteins in elongating cotton fiber cells. Proteomics 13:1159–1163
-
(2013)
Proteomics
, vol.13
, pp. 1159-1163
-
-
Zhang, B.1
Yang, Y.W.2
Zhang, Y.3
Liu, J.Y.4
-
61
-
-
76149113938
-
Proteomic identification of differentially expressed proteins in the Ligon lintless mutant of upland cotton (Gossypium hirsutum L.)
-
COI: 1:CAS:528:DC%2BD1MXhsFyqu7jK, PID: 19954254
-
Zhao PM, Wang LL, Han LB, Wang J, Yao Y, Wang HY, Du XM, Luo YM, Xia GX (2010) Proteomic identification of differentially expressed proteins in the Ligon lintless mutant of upland cotton (Gossypium hirsutum L.). J Proteome Res 9:1076–1087
-
(2010)
J Proteome Res
, vol.9
, pp. 1076-1087
-
-
Zhao, P.M.1
Wang, L.L.2
Han, L.B.3
Wang, J.4
Yao, Y.5
Wang, H.Y.6
Du, X.M.7
Luo, Y.M.8
Xia, G.X.9
-
62
-
-
84901834663
-
Cotton proteomics for deciphering the mechanism of environment stress response and fiber development
-
COI: 1:CAS:528:DC%2BC2cXls1yjsLc%3D, PID: 24680693
-
Zhou M, Sun G, Sun Z, Tang Y, Wu Y (2014) Cotton proteomics for deciphering the mechanism of environment stress response and fiber development. J Proteomics 105:74–84
-
(2014)
J Proteomics
, vol.105
, pp. 74-84
-
-
Zhou, M.1
Sun, G.2
Sun, Z.3
Tang, Y.4
Wu, Y.5
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