Advancing methodologies in Clinical Research Informatics (CRI): Foundational work for a maturing field

Journal of Biomedical Informatics

Volumn 52, Issue , 2014, Pages 1-3

  Embi, Peter J ^a   Payne, Philip R O ^a  

^a OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CLINICAL RESEARCH; CLINICAL RESEARCH INFORMATICS; EDITORIAL; HEALTH CARE; HEALTH SERVICES RESEARCH; INFORMATION PROCESSING; KNOWLEDGE MANAGEMENT; MEDICAL INFORMATICS; PRODUCTIVITY; BIOMEDICAL RESEARCH; COMPUTATIONAL BIOLOGY; HUMANS; METHODS; TRENDS;

BIOMEDICAL RESEARCH; COMPUTATIONAL BIOLOGY; HUMANS; MEDICAL INFORMATICS;

EID: 84919666583     PISSN: 15320464     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbi.2014.10.007     Document Type: Editorial

References (38)

1. Research NDsPoC. NIH director's panel on clinical research report. Bethesda, MD: National Institutes of Health; 1997.
2. The Cancer Biomedical Informatics Grid (caBIG): infrastructure and applications for a worldwide research community. Stud Health Technol Inform 2007;129(Pt 1):330-4. PubMed PMID: 17911733. Epub 2007/10/04.eng.
3. Kakazu K.K., Cheung L.W., Lynne W. The Cancer Biomedical Informatics Grid (caBIG): pioneering an expansive network of information and tools for collaborative cancer research. Hawaii Med J 2004, 63(9):273-275. PubMed PMID: 15540527.
4. Zerhouni E.A. Translational and clinical science - time for a new vision. N Engl J Med 2005, 353(15):1621-1623. PubMed PMID: 16221788.
5. Zerhouni E.A. Clinical research at a crossroads: the NIH roadmap. J Investig Med 2006, 54(4):171-173. PubMed PMID: 17152855.eng.
6. Payne P.R., Johnson S.B., Starren J.B., Tilson H.H., Dowdy D. Breaking the translational barriers: the value of integrating biomedical informatics and translational research. J Investig Med 2005, 53(4):192-200. PubMed PMID: 15974245.
7. Sung N.S., Crowley W.F., Genel M., Salber P., Sandy L., Sherwood L.M., et al. Central challenges facing the national clinical research enterprise. JAMA 2003, 289(10):1278-1287. PubMed PMID: 12633190.
8. Oster S., Langella S., Hastings S., Ervin D., Madduri R., Phillips J., et al. caGrid 1.0: an enterprise Grid infrastructure for biomedical research. J Am Med Inform Assoc 2008, 15(2):138-149. PubMed PMID: 18096909. Pubmed Central PMCID: 2274794. Epub 2007/12/22.eng.
9. Saltz J., Oster S., Hastings S., Langella S., Kurc T., Sanchez W., et al. CaGrid: design and implementation of the core architecture of the cancer biomedical informatics grid. Bioinformatics 2006, 22(15):1910-1916. PubMed PMID: 16766552.
10. Embi P.J., Payne P.R. Clinical research informatics: challenges, opportunities and definition for an emerging domain. J Am Med Inform Assoc: JAMIA 2009, 16(3):316-327. PubMed PMID: 19261934. Pubmed Central PMCID: 2732242.
11. Oster S., Langella S., Hastings S., Ervin D., Madduri R., Phillips J., et al. caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research. J Am Med Inf Assoc: JAMIA 2008, 15(2):138-149. PubMed PMID: 18096909.eng.
12. The Cancer Biomedical Informatics Grid (caBIG): infrastructure and applications for a worldwide research community. Medinfo 2007, 12(Pt 1):330-334. PubMed PMID: 17911733.
13. Chung T.K., Kukafka R., Johnson S.B. Reengineering clinical research with informatics. J Investig Med 2006, 54(6):327-333. PubMed PMID: 17134616.eng.
14. Payne P.R., Embi P.J., Kahn M.G. Selected papers from the 2011 Summit on Clinical Research Informatics. J Biomed Inf 2011, 44(Suppl 1):S54-S55. PubMed PMID: 22138363.
15. Embi P.J. Clinical research informatics: survey of recent advances and trends in a maturing field. Yearbook Med Inf 2013, 8(1):178-184. PubMed PMID: 23974569.
16. Collen M.F. Clinical research databases - a historical review. J Med Syst 1990, 14(6):323-344. PubMed PMID: 2132040.
17. Gillen J.E., Tse T., Ide N.C., McCray A.T. Design, implementation and management of a web-based data entry system for ClinicalTrials.gov. Stud Health Technol Inf 2004, 107(Pt 2):1466-1470. PubMed PMID: 15361058.
18. Holve E., Segal C., Lopez M.H., Rein A., Johnson B.H. The electronic data methods (EDM) forum for comparative effectiveness research (CER). Med Care 2012, 50(Suppl):S7-S10. PubMed PMID: 22692262. Epub 2012/06/22.eng.
19. Friedman C.P., Wong A.K., Blumenthal D. Achieving a nationwide learning health system. Sci Transl Med 2010, 2(57):57cm29. PubMed PMID: 21068440. Epub 2010/11/12.
20. Hripcsak G., Bloomrosen M., FlatelyBrennan P., Chute C.G., Cimino J., Detmer D.E., et al. Health data use, stewardship, and governance: ongoing gaps and challenges: a report from AMIA's 2012 Health Policy Meeting. J Am Med Inf Assoc: JAMIA 2014, 21(2):204-211. PubMed PMID: 24169275. Pubmed Central PMCID: 3932468.
21. Richesson RL. An informatics framework for the standardized collection and analysis of medication data in networked research. J Biomed Inf 2014;52:4-10.
22. Cimino J, Ayres EJ, Remennik L, Rath S, Freedman R, Beri A, et al. The National Institutes of Health's Biomedical Translational Research Information System (BTRIS): design, contents, functionality and experience to date. J Biomed Inf 2014;52:11-27.
23. Danciu I, Cowan J, Basford M, Wang X, Saip A, Osgood S, et al. Secondary use of clinical data: the Vanderbilt approach. J Biomed Inf 2014;52:28-35.
24. Patel VN, Kaelber DC. Using aggregated, de-identified electronic health record data for multivariate pharmacosurveillance: a case study of azathioprine. J Biomed Inf 2014;52:36-42.
25. Ong TC, Mannino MV, Schilling LM, Kahn MG. Improving record linkage performance in the presence of missing linkage data. J Biomed Inf 2014;52:43-54.
26. Lv X, Guan Y, Deng B. Transfer learning based clinical concept extraction on data from multiple sources. J Biomed Inf 2014;52:55-64.
27. Wyatt MC, Hendrickson RC, Ames M, Bondy J, Ranauro P, English TM, et al. Federated Aggregate Cohort Estimator (FACE): an easy to deploy, vendor neutral, multi-institutional cohort query architecture. J Biomed Inf 2013;52:156-162.
28. Wade TD, Zelarney PT, Hum RC, McGee S, Batson D. Using patient lists to add value to integrated data repositories. J Biomed Inf 2014;52:65-70.
29. Sim I, Tu SW, Carini S, Lehmann HP, Pollack BH, Peleg M, et al. The Ontology of Clinical Research (OCRe): an informatics foundation for the science of clinical research. J Biomed Inf 2014;52:71-84.
30. Rossi E, Rosa M, Rossi L, Priori A, Marceglia S. WebBioBank: a new platform for integrating clinical forms and shared neurosignal analyses to support multi-centre studies in Parkinson's disease. J Biomed Inf 2014;52:127-139.
31. Castro VM, Apperson WK, Gainer VS, Ananthakrishnan AN, Goodson AP, Wang TD, et al. Evaluation of matched control algorithms in EHR-based phenotyping studies: A case study of inflammatory bowel disease comorbidities. J Biomed Inf 2014;52:140-146.
32. Hao T, Rusanov A, Boland MR, Weng C. Clustering clinical trials with similar eligibility criteria features. J Biomed Inf 2014;52:147-155.
33. Goodman K.W., Adams S., Berner E.S., Embi P.J., Hsiung R., Hurdle J., et al. AMIA's code of professional and ethical conduct. J Am Med Inf Assoc: JAMIA 2013, 20(1):141-143.
34. He S, Narus SP, Facelli JC, Lau LM, Botkin JR, Hurdle J. A domain analysis model for e-IRB systems: addressing the weak link in clinical research informatics. J Biomed Inf 2014;52:85-93.
35. Bian J, Xie M, Topaloglu U, Hudson T, Eswaran H, Hogan W. Social network analysis of biomedical research collaboration networks in a CTSA institution. J Biomed Inf 2014;52:94-104.
36. Boland MR, Rusanov A, So Y, Lopez-Jimenez C, Busacca L, Steinman RC, et al. From expert-derived user needs to user-perceived ease of use and usefulness: a two-phase mixed-methods evaluation framework. J Biomed Inf 2014;52:105-114.
37. Embi P.J., Payne P.R. Evidence generating medicine: redefining the research-practice relationship to complete the evidence cycle. Med Care 2013, 51(8 Suppl 3):S87-S91.
38. Curcin V, Woodcock T, Poots A, Majeed A, Bell D. Model-driven approach to data collection and reporting for quality improvement. J Biomed Inf 2014;52:115-126.