Yeast tolerance to the ionic liquid 1-ethyl-3-methylimidazolium acetate

FEMS Yeast Research

Volumn 14, Issue 8, 2014, Pages 1286-1294

  Sitepu, Irnayuli R ^a,b   Shi, Shuang ^a   Simmons, Blake A ^c,d   Singer, Steven W ^c,e   Boundy Mills, Kyria ^a   Simmons, Christopher W ^a,c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Forestry Research and Development Agency   (Indonesia)

^c JOINT BIOENERGY INSTITUTE   (United States)

^d SANDIA NATIONAL LABORATORIES   (United States)

^e LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

Galactomyces geotrichum; Inhibitor tolerance; Ionic liquid pretreatment; Lignocellulosic biofuels

Indexed keywords

1 ETHYL 3 METHYLIMIDAZOLIUM ACETATE; ALCOHOL; IONIC LIQUID; POLYSACCHARIDE; UNCLASSIFIED DRUG; 1-ETHYL-3-METHYLIMIDAZOLIUM; BIOFUEL; CULTURE MEDIUM; IMIDAZOLE DERIVATIVE; LIGNIN; LIGNOCELLULOSE;

ARTICLE; ASCOMYCETES; BASIDIOMYCETES; BIOMASS; BRETTANOMYCES; CANDIDA; CELL DENSITY; CLAVISPORA; CONTROLLED STUDY; CRYPTOCOCCUS; CYBERLINDNERA; DEBARYOMYCES; FERMENTATION; FUNGUS; FUNGUS GROWTH; GALACTOMYCES; HANSENIASPORA; HYPHOPICHIA; KAZACHSTANIA; KLUYVEROMYCES; KOMAGATAELLA; METSCHNIKOWIA; MEYEROZYMA; MILLEROZYMA; NAUMOVOZYMA; NONHUMAN; OGATAEA; PICHIA; RHODOSPORIDIUM; RHODOTORULA; SACCHARIFICATION; SACCHAROMYCES; SPORIDIOBOLUS; TORULASPORA; WICKERHAMOMYCES; YARROWIA; YEAST; ZYGOASCUS; ZYGOSACCHAROMYCES; CHEMISTRY; CULTURE MEDIUM; DRUG EFFECTS; DRUG TOLERANCE; GROWTH, DEVELOPMENT AND AGING; METABOLISM;

ASCOMYCOTA; BASIDIOMYCOTA; CLAVISPORA; DEBARYOMYCES; GALACTOMYCES; GALACTOMYCES GEOTRICHUM; HYPHOPICHIA; KAZACHSTANIA; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; YARROWIA; ZYGOASCUS;

ASCOMYCOTA; BASIDIOMYCOTA; BIOFUELS; BIOMASS; CULTURE MEDIA; DRUG TOLERANCE; ETHANOL; FERMENTATION; IMIDAZOLES; IONIC LIQUIDS; LIGNIN;

EID: 84918585413     PISSN: 15671356     EISSN: 15671364     Source Type: Journal    
DOI: 10.1111/1567-1364.12224     Document Type: Article

References (30)

1. Boundy-Mills K (2008) The Phaff yeast culture collection has found its niche. Soc Ind Microbiol News 58: 49-56.
2. Boundy-Mills K (2012) Yeast culture collections of the world: meeting the needs of industrial researchers. J Ind Microbiol Biotechnol 39: 673-680.
3. Brandt A, Gräsvik J, Hallet J & Welton T (2013) Deconstruction of lignocellulosic biomass with ionic liquids. Green Chem 15: 550-583.
4. Dadi A, Varanasi S & Schall C (2006) Enhancement of cellulose saccharification kinetics using an ionic liquid pretreatment step. Biotechnol Bioeng 95: 904-910.
5. Datta S, Holmes B, Park J, Chen Z, Dibble D, Hadi M, Blanch H, Simmons B & Sapra R (2010) Ionic liquid tolerant hyperthermophilic cellulases for biomass pretreatment and hydrolysis. Green Chem 12: 338-345.
6. Docherty K & Kulpa C Jr (2005) Toxicity and antimicrobial activity of imidazolium and pyridinium ionic liquids. Green Chem 7: 185-189.
7. Edgar R (2004) muscle: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113.
8. Felsenstein J (1989) phylip - Phylogeny inference package (version 3.2). Cladistics 5: 164-166.
9. Freer S (1991) Fermentation and aerobic metabolism of cellodextrins by yeasts. Appl Environ Microbiol 57: 655-659.
10. Freer S & Detroy R (1982) Direct fermentation of cellodextrins to ethanol by Candida wickerhamii and C. lusitanieae. Biotechnol Lett 4: 453-458.
11. Golomb B, Morales V, Jung A, Yau B & Boundy-Mills K (2013) Effects of pectinolytic yeast on the microbial composition and spoilage of olive fermentations. Food Microbiol 33: 97-106.
12. Huang Q, Wang Q, Gong Z, Jin G, Shen H, Xiao S, Xie H, Ye S, Wang J & Zhao Z (2013) Effects of selected ionic liquids on lipid production by the oleaginous yeast Rhodosporidium toruloides. Bioresour Technol 130: 339-344.
13. Khudyakov J, D'haeseleer P, Borglin S, DeAngelis K, Woo H, Lindquist E, Hazen T, Simmons B & Thelen M (2012) Global transcriptome response to ionic liquid by a tropical rain forest soil bacterium, Enterobacter lignolyticus. P Natl Acad Sci USA 109: E2173-E2182.
14. Lee H, To R, Latta R, Biely P & Schneider H (1987) Some properties of extracellular acetyxylan esterase produced by the yeast Rhodotorula mucilaginosa. Appl Environ Microbiol 53: 2831-2834.
15. Menon V, Prakash G & Rao M (2010a) Enzymatic hydrolysis and ethanol production using xyloglucanase and Debaryomyces hansenii from tamarind kernel powder: galactoxyloglucan predominant hemicellulose. J Biotechnol 148: 233-239.
16. Menon V, Prakash G, Prabhune A & Rao M (2010b) Biocatalytic approach for the utilization of hemicellulose for ethanol production from agricultural residue using thermostable xylanase and thermotolerant yeast. Bioresour Technol 101: 5366-5373.
17. Nigam J, Margaritis A & Lachance M (1985) Aerobic fermentation of D-xylose to ethanol by Clavispora sp. Appl Environ Microbiol 50: 763-766.
18. Ouellet M, Datta S, Dibble D et al. (2011) Impact of ionic liquid pretreated plant biomass on Saccharomyces cerevisiae growth and biofuel production. Green Chem 13: 2743-2749.
19. Reddy A, Simmons C, Claypool J, Jabusch L, Burd H, Hadi M, Simmons B, Singer S & VanderGheynst J (2012) Thermophilic enrichment of microbial communities in the presence of the ionic liquid 1-ethyl-3-methylimidazolium acetate. J Appl Microbiol 113: 1362-1370.
20. Roseiro J, Peito M, Gírio F & Amaral-Collaçoa M (1991) The effects of the oxygen transfer coefficient and substrate concentration on the xylose fermentation by Debaryomyces hansenii. Arch Microbiol 156: 484-490.
21. Simmons C, Reddy A, VanderGheynst J, Simmons B & Singer S (2014) Bacillus coagulans tolerance to 1-ethyl-3-methylimidazolium-based ionic liquids in aqueous and solid-state thermophilic culture. Biotechnol Prog 30: 311-316.
22. Singer S, Reddy A, Gladden J, Guo H, Hazen T, Simmons B & VanderGheynst J (2011) Enrichment, isolation and characterization of fungi tolerant to 1-ethyl-3-methylimidazolium acetate. J Appl Microbiol 110: 1023-1031.
23. Sitepu I, Ignatia L, Franz A, Wong D, Faulina S, Tsui M, Kanti A & Boundy-Mills K (2012) An improved high-throughput Nile red fluorescence assay for estimating intracellular lipids in a variety of yeast species. J Microbiol Methods 91: 321-328.
24. Sitepu I, Sestric R, Ignatia L, Levin D, German J, Gillies L, Almada L & Boundy-Mills K (2013) Manipulation of culture conditions alters lipid content and fatty acid profiles of a wide variety of known and new oleaginous yeast species. Bioresour Technol 144: 360-369.
25. Sitepu I, Selby T, Lin T, Zhu S & Boundy-Mills K (2014) Carbon source utilization and inhibitor tolerance of 45 oleaginous yeast species. J Ind Microbiol Biotechnol, 41: 1-10.
26. Tavares J, Duarte L, Amaral-Collaçoa M & Gírio F (2000) The influence of hexoses addition on the fermentation of d-xylose in Debaryomyces hansenii under continuous cultivation. Enzyme Microb Technol 26: 743-747.
27. Tsui C, Daniel H-M, Robert V & Meyer W (2008) Re-examining the phylogeny of clinically relevant Candida species and allied genera based on multigene analyses. FEMS Yeast Res 8: 651-659.
28. Varnait R & Raudonien V (2005) Enzymatic lignin degradation in rye straw by micromycetes. Int Biodeterior Biodegradation 56: 192-195.
29. Visser W, Scheffers W, Batenburg-van der Vegte W & van Dijken J (1990) Oxygen requirements of yeasts. Appl Environ Microbiol 56: 3785-3792.
30. Zha Y, Hossain A, Tobola F, Sedee N, Havekes M & Punt P (2013) Pichia anomala 29X: a resistant strain for lignocellulosic biomass hydrolysate fermentation. FEMS Yeast Res 13: 609-617.