Morphological and molecular characterization of three Agaricus species from tropical Asia (Pakistan, Thailand) reveals a new group in section Xanthodermatei

Mycologia

Volumn 106, Issue 6, 2014, Pages 1220-1232

  Thongklang, Naritsada ^a   Nawaz, Rizwana ^b   Khalid, Abdul N ^b   Chen, Jie ^a   Hyde, Kevin D ^a   Zhao, Ruilin ^c   Parra, Luis A ^d   Hanif, Muhammad ^e   Moinard, Magalie ^f   Callac, Philippe ^f  

^a MAE FAH LUANG UNIVERSITY   (Thailand)

^b UNIVERSITY OF THE PUNJAB   (Pakistan)

^c INSTITUTE OF MICROBIOLOGY   (China)

^d Department of Botany Government College University ^*  (Spain)

^e GC UNIVERSITY   (Pakistan)

^f CEMAGREF   (France)

Author keywords

Basidiomycota; Morphology; New species; Phylogeny; Tropical biodiversity

Indexed keywords

EDIBLE SPECIES; FUNGUS; MEDICINAL PLANT; MOLECULAR ANALYSIS; MORPHOLOGY; NEW SPECIES; PHYLOGENETICS; TROPICAL ENVIRONMENT;

PAKISTAN; THAILAND;

AGARICUS; BASIDIOMYCOTA;

FUNGAL DNA; RIBOSOMAL SPACER DNA; RIBOSOME DNA;

AGARICUS; CHEMISTRY; CLASSIFICATION; CYTOLOGY; DNA SEQUENCE; FRUITING BODY; FUNGUS SPORE; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PAKISTAN; PHENOTYPE; PHYLOGENY; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE; THAILAND;

AGARICUS; BASE SEQUENCE; DNA, FUNGAL; DNA, RIBOSOMAL; DNA, RIBOSOMAL SPACER; FRUITING BODIES, FUNGAL; MOLECULAR SEQUENCE DATA; PAKISTAN; PHENOTYPE; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; SPORES, FUNGAL; THAILAND;

EID: 84915753826     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/14-076     Document Type: Article

References (29)

1. Ahmad S, Iqbal SH, Khalid AN. 1997. Fungi of Pakistan. Sultan AhmadMycological Society of Pakistan, Department of Botany, Univ. Punjab, Quaid-e-Azam Campus, Lahore-54590, Pakistan.
2. Callac P, Guinberteau J. 2005. Morphological and molecular characterization of two novel species of Agaricus section Xanthodermatei. Mycologia 97:416-424, doi:10.3852/mycologia.97.2.416
3. Cappelli A. 1984. Agaricus L.: Fr. In: Biella Giovanna, ed. Saronno, Italia: Fungi Europaei. 1560 p.
4. Chen J, Zhao RL, Karunarathna SC, Callac P, Raspé O, Bahkali AH, Hyde KD. 2012. Agaricus megalosporus: a new species in section Minores. Cryptog Mycol 33:145- 155, doi:10.7872/crym.v33.iss2.2012.145
5. Doyle JJ, Doyle JY. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull Bot Soc Am 19:11-15.
6. Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118, doi:10.1111/j.1365-294X.1993.tb00005.x
7. Gill M, Strauch RJ. 1984. Constituents of Agaricus xanthodermus Geneview: the first naturally endogenous azo compound and toxic phenolic metabolites. Z Naturf 39c:1027-1029.
8. Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59:307-321, doi:10.1093/sysbio/syq010
9. Heinemann P. 1971. Quelques Psalliotes du Congo-Brazzaville. Cah Maboké 9:5-10.
10. Imbernon M, Callac P, Gasqui P, Kerrigan RW, Velcko AJ Jr. 1996. BSN, the primary determinant of basidial spore number and reproductive mode in Agaricus bisporus, maps to chromosome I. Mycologia 88:749- 761, doi:10.2307/3760970
11. Kerrigan RW, Callac P, Guinberteau J, Challen MP, Parra LA. 2005. Agaricus section Xanthodermatei: a phylogenetic reconstruction with commentary on taxa. Mycologia 97: 1292-1315, doi:10.3852/mycologia.97.6.1292
12. Kerrigan RW, Callac P, Parra LA. 2008. New and rare taxa in Agaricus section Bivelares (Duploannulati). Mycologia 100:876-892, doi:10.3852/08-019
13. Kerrigan RW, Ross IK. 1987. Dynamic aspects of basidiospore number variation in Agaricus. Mycologia 79:204-215, doi:10.2307/3807654
14. Lebel T. 2013. Two new species of sequestrate Agaricus (section Minores) from Australia. Mycol Prog 12:699- 707, doi:10.1007/s11557-012-0879-x
15. Lebel T., Syme A. 2012. Sequestrate species of Agaricus and Macrolepiota from Australia: new species and combinations and their position in calibrated phylogeny. Mycologia 104:496-520, doi:10.3852/11-092
16. Notredame C, Higgins DG, Heringa J. 2000. T-coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol 302:205-217, doi:10.1006/ jmbi.2000.4042
17. Parra LA. 2013. Agaricus L., Allopsalliota Nauta & Bas. Alassio, Italia: Fungi Europaei 1A. Candusso Edizioni.
18. Parra LA, Mua A, Cappelli A, Callac P. 2011. Agaricus biannulatus sp. nov., a new species of the section Xanthodermatei collected in Sardinia and Sicily. Micol Veg Mediterr 26:3-20.
19. Reid DA. 1984. Another British record of Puccinia longicornis. Bull Br Mycol Soc 18:27-129.
20. Saghai-Maroof MA, Solima KM, Jorgenson RA, Allard RW. 1984. Ribosomal DNA spacer- length polymorphisms in barley: Mendelian inheritance, chromosomal location and population dymamics. Proc Natl Acad Sci USA 81: 8014-8018, doi:10.1073/pnas.81.24.8014
21. Sultana K, Abdul Rauf C, Riaz A, Naz F, Irshad G, Irfan Ul Haque M. 1997. Checklist of Agarics of Kaghan Valley-1, Pak. J Bot 43:1777-1787.
22. Swofford DL. 2004. PAUP* 4.0b10: phylogenetic analysis using parsimony. Sunderland, Massachusetts: Sinauer Associates.
23. Wasser SP. 2002. Family Agaricaceae (Fr.) Cohn (basidiomycetes) of Israel. Mycobiota I. Tribe Agariceae Pat. In: Nevo E, Volz PA, ed. Lichtenstein: Ruggell. 212 p.
24. White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. NewYork: Academic Press. p 315-322.
25. Wisitrassameewong K, Karunarathna SC, Thongklang N, Zhao RL, Callac P, Chukeatirote E, Bahkali AH, Hyde KD. 2012. Agaricus subrufescens: new to Thailand. Chiang Mai J Sci 39:281-291.
26. Wood WF, Watson RL, Largent DL. 1998. Phenol, the odor compound from Agaricus praeclaresquamosus. Biochem Syst Ecol 26:793-793, doi:10.1016/S0305-1978(98) 00058-1
27. Zhao RL, Desjardin DE, Callac P, Parra LA, Guinberteau J, Soythong K, Karunarathna SC, Zhang Y, Hyde KD. 2013 [2012]. Two species of Agaricus sect. Xanthodermatei from Thailand. Mycotaxon 122:187-195, doi:10.5248/ 122.187
28. Zhao RL, Hyde KD, Desjardin DE, Raspé O, Soytong K, Guinberteau J, Karunarathna SC, Callac P. 2012. Agaricus flocculosipes sp. nov., a newpotentially cultivatable species from the palaeotropics. Mycoscience 53: 300-311, doi:10.1007/S10267-011-0169-5
29. Zhao RL, Karunarathna SC, Raspé O, Parra LA, Guinberteau J, Moinard M, Kesel AD, Barroso R, Courtecuisse R, Hyde KD, Guelly AK, Desjardin DE, Callac P. 2011. Major clades in tropical Agaricus. Fungal Divers 51: 279-296, doi:10.1007/s13225-011-0136-7