메뉴 건너뛰기




Volumn 34, Issue 4, 2014, Pages 2219-2224

Development of novel microRNA-based genetic markers in foxtail millet for genotyping applications in related grass species

Author keywords

Cereals; Cross transferability; Foxtail millet (Setaria italica L.); microRNA based markers; Millets; Phylogenetics

Indexed keywords

CROPS; RNA;

EID: 84914819896     PISSN: 13803743     EISSN: 15729788     Source Type: Journal    
DOI: 10.1007/s11032-014-0137-9     Document Type: Article
Times cited : (60)

References (22)
  • 2
    • 79959967431 scopus 로고    scopus 로고
    • psRNATarget: a plant small RNA target analysis server
    • COI: 1:CAS:528:DC%2BC3MXosVOnt7w%3D, PID: 21622958
    • Dai X, Zhao PX (2011) psRNATarget: a plant small RNA target analysis server. Nucleic Acids Res 39:W155–W159
    • (2011) Nucleic Acids Res , vol.39 , pp. W155-W159
    • Dai, X.1    Zhao, P.X.2
  • 3
    • 80054709141 scopus 로고    scopus 로고
    • miRNA Biomarkers in breast cancer detection and management
    • COI: 1:CAS:528:DC%2BC3MXjvVCnu7k%3D, PID: 21479130
    • Fu SW, Chen L, Man YG (2011) miRNA Biomarkers in breast cancer detection and management. J Cancer 2:116–122
    • (2011) J Cancer , vol.2 , pp. 116-122
    • Fu, S.W.1    Chen, L.2    Man, Y.G.3
  • 4
    • 84881373258 scopus 로고    scopus 로고
    • MicroRNA-based molecular markers: a novel PCR-based genotyping technique in Brassica species
    • COI: 1:CAS:528:DC%2BC3sXht1ChsbzF
    • Fu D, Ma B, Mason AS, Xiao M, Wei L, An Z (2013) MicroRNA-based molecular markers: a novel PCR-based genotyping technique in Brassica species. Plant Breed 132:375–381
    • (2013) Plant Breed , vol.132 , pp. 375-381
    • Fu, D.1    Ma, B.2    Mason, A.S.3    Xiao, M.4    Wei, L.5    An, Z.6
  • 5
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data
    • COI: 1:CAS:528:DyaK2sXksVahs7o%3D, PID: 9254330
    • Gascuel O (1997) BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol Biol Evol 14:685–695
    • (1997) Mol Biol Evol , vol.14 , pp. 685-695
    • Gascuel, O.1
  • 6
    • 77953700486 scopus 로고    scopus 로고
    • The next thing in prognostic molecular markers: microRNA signatures of cancer
    • COI: 1:CAS:528:DC%2BC3cXos1GhtLk%3D, PID: 20551450
    • Grady WM, Tewari M (2010) The next thing in prognostic molecular markers: microRNA signatures of cancer. Gut 59:706–708
    • (2010) Gut , vol.59 , pp. 706-708
    • Grady, W.M.1    Tewari, M.2
  • 7
    • 84881377543 scopus 로고    scopus 로고
    • Development and utilization of novel SSRs in foxtail millet [Setaria italica (L.) P. Beauv.]
    • COI: 1:CAS:528:DC%2BC3sXht1Chsb3L
    • Gupta S, Kumari K, Muthamilarasan M, Subramanian A, Prasad M (2013) Development and utilization of novel SSRs in foxtail millet [Setaria italica (L.) P. Beauv.]. Plant Breed 132:367–374
    • (2013) Plant Breed , vol.132 , pp. 367-374
    • Gupta, S.1    Kumari, K.2    Muthamilarasan, M.3    Subramanian, A.4    Prasad, M.5
  • 8
    • 0000210258 scopus 로고
    • Nouvelles recherches sur la distribution florale
    • Jaccard P (1908) Nouvelles recherches sur la distribution florale. Bull Soc Vaud Sci Nat 44:223–270
    • (1908) Bull Soc Vaud Sci Nat , vol.44 , pp. 223-270
    • Jaccard, P.1
  • 9
    • 84903907761 scopus 로고    scopus 로고
    • Comprehensive genome-wide identification and expression profiling of foxtail millet [Setaria italica (L.)] miRNAs in response to abiotic stress and development of miRNA database
    • Khan Y, Yadav A, Suresh VB, Muthamilarasan M, Yadav CB, Prasad M (2014) Comprehensive genome-wide identification and expression profiling of foxtail millet [Setaria italica (L.)] miRNAs in response to abiotic stress and development of miRNA database. Plant Cell Tiss Organ. doi:10.1007/s11240-014-0480-x
    • (2014) Plant Cell Tiss Organ
    • Khan, Y.1    Yadav, A.2    Suresh, V.B.3    Muthamilarasan, M.4    Yadav, C.B.5    Prasad, M.6
  • 10
    • 84891818318 scopus 로고    scopus 로고
    • miRBase: annotating high confidence microRNAs using deep sequencing data
    • COI: 1:CAS:528:DC%2BC2cXos1Wk, PID: 24275495
    • Kozomara A, Griffiths-Jones S (2014) miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acid Res 42:D68–D73
    • (2014) Nucleic Acid Res , vol.42 , pp. D68-D73
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 11
    • 84879264765 scopus 로고    scopus 로고
    • Development of eSSR-markers in Setaria italica and their applicability in studying genetic diversity, cross-transferability and comparative mapping in millet and non-millet species
    • COI: 1:CAS:528:DC%2BC3sXhtVyhtr%2FN, PID: 23805325
    • Kumari K, Muthamilarasan M, Misra G, Gupta S, Subramanian A, Parida SK, Chattopadhyay D, Prasad M (2013) Development of eSSR-markers in Setaria italica and their applicability in studying genetic diversity, cross-transferability and comparative mapping in millet and non-millet species. PLoS ONE 8:e67742
    • (2013) PLoS ONE , vol.8 , pp. e67742
    • Kumari, K.1    Muthamilarasan, M.2    Misra, G.3    Gupta, S.4    Subramanian, A.5    Parida, S.K.6    Chattopadhyay, D.7    Prasad, M.8
  • 12
    • 84879207740 scopus 로고    scopus 로고
    • Setaria genome sequencing: an overview
    • COI: 1:CAS:528:DC%2BC2cXpt12msg%3D%3D
    • Lata C, Prasad M (2013) Setaria genome sequencing: an overview. J Plant Biochem Biotechnol 22:257–260
    • (2013) J Plant Biochem Biotechnol , vol.22 , pp. 257-260
    • Lata, C.1    Prasad, M.2
  • 13
    • 84879143685 scopus 로고    scopus 로고
    • Foxtail millet, a model crop for genetic and genomic studies in bioenergy grasses
    • PID: 22985089
    • Lata C, Gupta S, Prasad M (2013) Foxtail millet, a model crop for genetic and genomic studies in bioenergy grasses. Crit Rev Biotechnol 33:328–343
    • (2013) Crit Rev Biotechnol , vol.33 , pp. 328-343
    • Lata, C.1    Gupta, S.2    Prasad, M.3
  • 14
    • 84891147191 scopus 로고    scopus 로고
    • Identification and characterization of salt responsive miRNA-SSR markers in rice (Oryza sativa)
    • COI: 1:CAS:528:DC%2BC3sXhvFGrs7rF, PID: 24315823
    • Mondal TK, Ganie SA (2014) Identification and characterization of salt responsive miRNA-SSR markers in rice (Oryza sativa). Gene 535:204–209
    • (2014) Gene , vol.535 , pp. 204-209
    • Mondal, T.K.1    Ganie, S.A.2
  • 15
    • 84881338587 scopus 로고    scopus 로고
    • Recent advances in crop genomics for ensuring food security
    • Muthamilarasan M, Theriappan P, Prasad M (2013) Recent advances in crop genomics for ensuring food security. Curr Sci 105:155–158
    • (2013) Curr Sci , vol.105 , pp. 155-158
    • Muthamilarasan, M.1    Theriappan, P.2    Prasad, M.3
  • 16
    • 84894545931 scopus 로고    scopus 로고
    • Development of 5123 intron-length polymorphic markers for large-scale genotyping applications in foxtail millet
    • COI: 1:CAS:528:DC%2BC2cXisFKgsL0%3D, PID: 24086082
    • Muthamilarasan M, Venkata Suresh B, Pandey G, Kumari K, Parida SK, Prasad M (2014) Development of 5123 intron-length polymorphic markers for large-scale genotyping applications in foxtail millet. DNA Res 21:41–52
    • (2014) DNA Res , vol.21 , pp. 41-52
    • Muthamilarasan, M.1    Venkata Suresh, B.2    Pandey, G.3    Kumari, K.4    Parida, S.K.5    Prasad, M.6
  • 17
    • 84879139179 scopus 로고    scopus 로고
    • Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]
    • COI: 1:CAS:528:DC%2BC3sXmt1Ogs7g%3D, PID: 23382459
    • Pandey G, Misra G, Kumari K, Gupta S, Parida SK, Chattopadhyay D, Prasad M (2013) Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]. DNA Res 20:197–207
    • (2013) DNA Res , vol.20 , pp. 197-207
    • Pandey, G.1    Misra, G.2    Kumari, K.3    Gupta, S.4    Parida, S.K.5    Chattopadhyay, D.6    Prasad, M.7
  • 18
    • 10044265887 scopus 로고    scopus 로고
    • Data analysis methods
    • Hamon P, Seguin M, Perrier X, Glaszmann JC, (eds), Science Publishers, Montpellier:
    • Perrier X, Flori A, Bonnot F (2003) Data analysis methods. In: Hamon P, Seguin M, Perrier X, Glaszmann JC (eds) Genetic diversity of cultivated tropical plants. Science Publishers, Montpellier, pp 43–76
    • (2003) Genetic diversity of cultivated tropical plants , pp. 43-76
    • Perrier, X.1    Flori, A.2    Bonnot, F.3
  • 19
    • 84881483286 scopus 로고    scopus 로고
    • FmMDb: a versatile database of foxtail millet markers for millets and bioenergy grasses research
    • Suresh BV, Muthamilarasan M, Misra G, Prasad M (2013) FmMDb: a versatile database of foxtail millet markers for millets and bioenergy grasses research. PLoS ONE 8:e71418
    • (2013) PLoS ONE , vol.8 , pp. e71418
    • Suresh, B.V.1    Muthamilarasan, M.2    Misra, G.3    Prasad, M.4
  • 21
    • 0036256695 scopus 로고    scopus 로고
    • MapChart: software for the graphical presentation of linkage maps and QTLs
    • COI: 1:CAS:528:DC%2BD38XktlOntrw%3D, PID: 12011185
    • Voorrips RE (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. J Hered 93:77–78
    • (2002) J Hered , vol.93 , pp. 77-78
    • Voorrips, R.E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.