-
1
-
-
84865591846
-
A tale of three next generation sequencing platforms: Comparison of Ion Torrent
-
Quail MA, Smith M, Coupland P, Otto TD, Harris SR, et al. (2012) A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers. BMC Genomics 13(1): 341-354.
-
(2012)
Pacific Biosciences and Illumina MiSeq Sequencers. BMC Genomics
, vol.13
, Issue.1
, pp. 341-354
-
-
Quail, M.A.1
Smith, M.2
Coupland, P.3
Otto, T.D.4
Harris, S.R.5
-
2
-
-
80052527896
-
Sequencing firms eye pathology labs as next big market opportunity
-
DeFrancesco L, Subbaraman N (2011) Sequencing firms eye pathology labs as next big market opportunity. Nat Biotechnol 29: 379-380.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 379-380
-
-
Defrancesco, L.1
Subbaraman, N.2
-
3
-
-
84884240177
-
Companies 'going long' generate sequencing buzz at Marco Island
-
Eisenstein M (2013) Companies 'going long' generate sequencing buzz at Marco Island. Nat Biotechnol 31: 265-266.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 265-266
-
-
Eisenstein, M.1
-
4
-
-
78649773164
-
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
-
Adey A, Morrison HG, Xun X, Kitzman JO (2010) Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition. Genome Biol 11(12): R119.
-
(2010)
Genome Biol
, vol.11
, Issue.12
, pp. R119
-
-
Adey, A.1
Morrison, H.G.2
Xun, X.3
Kitzman, J.O.4
-
5
-
-
83055180102
-
Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantites of DNA
-
Marine R, Polson SW, Ravel J, Hatfull G, Russell D, et al. (2011) Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantites of DNA. Appl Environ Microbiol 77(22): 8071-8079.
-
(2011)
Appl Environ Microbiol
, vol.77
, Issue.22
, pp. 8071-8079
-
-
Marine, R.1
Polson, S.W.2
Ravel, J.3
Hatfull, G.4
Russell, D.5
-
6
-
-
84893723345
-
Library preparation methods for next-generation sequencing: Tone down the bias
-
van Dijk EL, Jaszczyszyn Y, Thermes C (2014) Library preparation methods for next-generation sequencing: tone down the bias. Exp Cell Res 322(1): 12-20.
-
(2014)
Exp Cell Res
, vol.322
, Issue.1
, pp. 12-20
-
-
Van Dijk, E.L.1
Jaszczyszyn, Y.2
Thermes, C.3
-
7
-
-
84857271408
-
Length and GC-biases during sequencing library amplification: A comparison of various polymerase-buffer systems with ancient and modern DNA sequencing libraries
-
Dabney J, Meyer M (2012) Length and GC-biases during sequencing library amplification: a comparison of various polymerase-buffer systems with ancient and modern DNA sequencing libraries. BioTechniques. 52, 87-94
-
(2012)
BioTechniques.
, vol.52
, pp. 87-94
-
-
Dabney, J.1
Meyer, M.2
-
8
-
-
84914674077
-
A defining decade in DNA sequencing
-
McPherson JD (2014) A defining decade in DNA sequencing. Nat Methods 11(10): 1003-1005.
-
(2014)
Nat Methods
, vol.11
, Issue.10
, pp. 1003-1005
-
-
McPherson, J.D.1
-
9
-
-
20044380139
-
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans
-
Loftus BJ, Fung E, Roncaglia P, Rowley D, Amedeo P, et al. (2005) The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Science 307: 1321-1324.
-
(2005)
Science
, vol.307
, pp. 1321-1324
-
-
Loftus, B.J.1
Fung, E.2
Roncaglia, P.3
Rowley, D.4
Amedeo, P.5
-
10
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
11
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25(16): 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, Issue.16
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
-
12
-
-
84914692090
-
-
Accessed 2014 Aug 4
-
Picard. Available: http://picard.sourceforge.net. Accessed 2014 Aug 4.
-
Picard
-
-
-
13
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing nextgeneration DNA sequencing data
-
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, et al. (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing nextgeneration DNA sequencing data. Genome Res 20(9): 1297-1303.
-
(2010)
Genome Res
, vol.20
, Issue.9
, pp. 1297-1303
-
-
McKenna, A.1
Hanna, M.2
Banks, E.3
Sivachenko, A.4
Cibulskis, K.5
-
14
-
-
84896009017
-
From fastq data to high-confidence variant calls: The Genome Analysis Toolkit best practices pipeline
-
Van der Auwera GA, Carneiro MO, Hartl C, Poplin R, del Angel G, et al. (2013) From fastq data to high-confidence variant calls: the Genome Analysis Toolkit best practices pipeline. Curr Protoc Bioinformatics 25: 1754-1760.
-
(2013)
Curr Protoc Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Van Der Auwera, G.A.1
Carneiro, M.O.2
Hartl, C.3
Poplin, R.4
Del Angel, G.5
-
15
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo MA, Banks E, Poplin R, Garimella K, Maguire JR, et al. (2011) A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat Genet 43(5): 491-498.
-
(2011)
Nat Genet
, vol.43
, Issue.5
, pp. 491-498
-
-
Depristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.4
Maguire, J.R.5
-
16
-
-
80054915847
-
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
-
Li H (2011) A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data. Bioinformatics 27(21): 2987-2993.
-
(2011)
Bioinformatics
, vol.27
, Issue.21
, pp. 2987-2993
-
-
Li, H.1
|