메뉴 건너뛰기




Volumn 13, Issue 11, 2014, Pages 5031-5040

Large-scale proteomic characterization of melanoma expressed proteins reveals nestin and vimentin as biomarkers that can potentially distinguish melanoma subtypes

Author keywords

biomarkers; melanoma; nestin; proteomics; quantitative proteomics; spectral counting; vimentin

Indexed keywords

DIPEPTIDYL PEPTIDASE IV; FIBRONECTIN; HISTONE H2A1B; LIPOCORTIN 1; NESTIN; NUCLEAR PROTEIN; TUMOR MARKER; UNCLASSIFIED DRUG; VIMENTIN; NES PROTEIN, HUMAN;

EID: 84908876168     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr5006789     Document Type: Article
Times cited : (21)

References (31)
  • 1
    • 78049264513 scopus 로고    scopus 로고
    • Scanning for melanoma
    • Wurn, E.; Soyer, H. Scanning for melanoma Aust. Prescriber 2010, 33, 150-155
    • (2010) Aust. Prescriber , vol.33 , pp. 150-155
    • Wurn, E.1    Soyer, H.2
  • 2
    • 34247635551 scopus 로고    scopus 로고
    • Diagnosis and treatment of cutaneous melanoma: State of the art 2006
    • Garbe, C.; Eigentler, T. K. Diagnosis and treatment of cutaneous melanoma: state of the art 2006 Melanoma Res. 2007, 17, 117-127
    • (2007) Melanoma Res. , vol.17 , pp. 117-127
    • Garbe, C.1    Eigentler, T.K.2
  • 4
    • 23944436422 scopus 로고    scopus 로고
    • Proteomics: From basic research to diagnostic application. a review of requirements & needs
    • Vitzthum, F.; Behrens, F.; Anderson, N. L.; Shaw, J. H. Proteomics: from basic research to diagnostic application. a review of requirements & needs J. Proteome Res. 2005, 4, 1086-1097
    • (2005) J. Proteome Res. , vol.4 , pp. 1086-1097
    • Vitzthum, F.1    Behrens, F.2    Anderson, N.L.3    Shaw, J.H.4
  • 5
    • 84872686063 scopus 로고    scopus 로고
    • Proteomics in melanoma biomarker discovery: Great potential, many obstacles
    • Sabel, M. S.; Liu, Y.; Lubman, D. M. Proteomics in melanoma biomarker discovery: great potential, many obstacles Int. J. Proteomics. 2011, 2011, 181890
    • (2011) Int. J. Proteomics. , vol.2011 , pp. 181890
    • Sabel, M.S.1    Liu, Y.2    Lubman, D.M.3
  • 6
    • 0025102645 scopus 로고
    • Human melanoma: Development and progression
    • Herlyn, M. Human melanoma: development and progression Cancer Metastasis Rev. 1990, 9, 101-112
    • (1990) Cancer Metastasis Rev. , vol.9 , pp. 101-112
    • Herlyn, M.1
  • 8
    • 33846109371 scopus 로고    scopus 로고
    • Direct cancer tissue proteomics: A method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues
    • Hwang, S.; Thumar, J.; Lundgren, D. H.; Rezaul, K.; Mayya, V.; Wu, L.; Eng, J.; Wright, M. E.; Han, D. Direct cancer tissue proteomics: a method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues Oncogene 2007, 26, 65-76
    • (2007) Oncogene , vol.26 , pp. 65-76
    • Hwang, S.1    Thumar, J.2    Lundgren, D.H.3    Rezaul, K.4    Mayya, V.5    Wu, L.6    Eng, J.7    Wright, M.E.8    Han, D.9
  • 9
    • 78049249542 scopus 로고    scopus 로고
    • Combined mass spectrometry-and immunohistochemistry-based approach to determine protein expression in archival melanoma-Proof of principle
    • Rezaul, K.; Murphy, M.; Lundgren, D.; Wilson, L.; Han, D. Combined mass spectrometry-and immunohistochemistry-based approach to determine protein expression in archival melanoma-proof of principle Pigm. Cell Melanoma Res. 2010, 23, 849-852
    • (2010) Pigm. Cell Melanoma Res. , vol.23 , pp. 849-852
    • Rezaul, K.1    Murphy, M.2    Lundgren, D.3    Wilson, L.4    Han, D.5
  • 10
    • 77449146854 scopus 로고    scopus 로고
    • Target-decoy search strategy for mass spectrometry-based proteomics
    • Elias, J. E.; Gygi, S. P. Target-decoy search strategy for mass spectrometry-based proteomics Methods Mol. Biol. 2010, 604, 55-71
    • (2010) Methods Mol. Biol. , vol.604 , pp. 55-71
    • Elias, J.E.1    Gygi, S.P.2
  • 11
    • 3242731195 scopus 로고    scopus 로고
    • A model for random sampling and estimation of relative protein abundance in shotgun proteomics
    • Liu, H.; Sadygov, R. G.; Yates, J. R. A model for random sampling and estimation of relative protein abundance in shotgun proteomics Anal. Chem. 2004, 76, 4193-4201
    • (2004) Anal. Chem. , vol.76 , pp. 4193-4201
    • Liu, H.1    Sadygov, R.G.2    Yates, J.R.3
  • 15
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y.; Hochberg, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing J. R. Stat. Soc., Ser. B 1995, 57 (1) 289-300
    • (1995) J. R. Stat. Soc., Ser. B , vol.57 , Issue.1 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 16
    • 84889598076 scopus 로고    scopus 로고
    • Spindle cell melanoma: A comparison of the cytomorphological features with the epithelioid variant
    • Walia, R.; Jain, D.; Mathur, S. R.; Iyer, V. K. Spindle cell melanoma: A comparison of the cytomorphological features with the epithelioid variant Acta Cytol. 2013, 57, 557-561
    • (2013) Acta Cytol. , vol.57 , pp. 557-561
    • Walia, R.1    Jain, D.2    Mathur, S.R.3    Iyer, V.K.4
  • 17
    • 84861575204 scopus 로고    scopus 로고
    • Animal-type melanoma: A rare type of malignant melanoma with an indolent clinical behaviour
    • Sabah, M.; Leader, M. Animal-type melanoma: a rare type of malignant melanoma with an indolent clinical behaviour Clin. Med. Oncol. 2007, 1, 95-98
    • (2007) Clin. Med. Oncol. , vol.1 , pp. 95-98
    • Sabah, M.1    Leader, M.2
  • 18
    • 34248673715 scopus 로고    scopus 로고
    • Melanoma invasion-current knowledge and future directions
    • Gaggioli, C.; Sahai, E. Melanoma invasion-current knowledge and future directions Pigm. Cell Res. 2007, 20, 161-172
    • (2007) Pigm. Cell Res. , vol.20 , pp. 161-172
    • Gaggioli, C.1    Sahai, E.2
  • 19
    • 84881267207 scopus 로고    scopus 로고
    • Role of vimentin in cell migration
    • Chernoivanenko, I.; Minin, A. A. Role of vimentin in cell migration Ontogenez. 2013, 44, 186-202
    • (2013) Ontogenez. , vol.44 , pp. 186-202
    • Chernoivanenko, I.1    Minin, A.A.2
  • 20
    • 54049148253 scopus 로고    scopus 로고
    • Keratin down-regulation in vimentin-positive cancer cells is reversible by vimentin RNA interference, which inhibits growth and motility
    • Paccione, R.; Miyazaki, H.; Patel, V.; Waseem, A.; Gutkind, J.; Zehner, Z.; Yeudall, W. Keratin down-regulation in vimentin-positive cancer cells is reversible by vimentin RNA interference, which inhibits growth and motility Mol. Cancer Ther. 2008, 7, 2894-2903
    • (2008) Mol. Cancer Ther. , vol.7 , pp. 2894-2903
    • Paccione, R.1    Miyazaki, H.2    Patel, V.3    Waseem, A.4    Gutkind, J.5    Zehner, Z.6    Yeudall, W.7
  • 22
    • 33845702260 scopus 로고    scopus 로고
    • Increased expression of stem cell markers in malignant melanoma
    • Klein, W.; Wu, B.; Zhao, S.; Wu, H.; Klein-Szanto, A.; Tahan, S. Increased expression of stem cell markers in malignant melanoma Mod. Pathol. 2007, 20, 102-107
    • (2007) Mod. Pathol. , vol.20 , pp. 102-107
    • Klein, W.1    Wu, B.2    Zhao, S.3    Wu, H.4    Klein-Szanto, A.5    Tahan, S.6
  • 23
    • 0030979469 scopus 로고    scopus 로고
    • Cellular composition and three-dimensional organization of the subventricular germinal zone in the adult mammalian brain
    • Doetsch, F.; Garcia-Verdugo, J. M.; Alvarez-Buylla, A. Cellular composition and three-dimensional organization of the subventricular germinal zone in the adult mammalian brain J. Neurosci. 1997, 17, 5046-5061
    • (1997) J. Neurosci. , vol.17 , pp. 5046-5061
    • Doetsch, F.1    Garcia-Verdugo, J.M.2    Alvarez-Buylla, A.3
  • 24
    • 0033534379 scopus 로고    scopus 로고
    • Identification of a neural stem cell in the adult mammalian central nervous system
    • Johansson, C. B.; Momma, S.; Clarke, D. L.; Risling, M.; Lendayl, U.; Frisen, J. Identification of a neural stem cell in the adult mammalian central nervous system Cell 1999, 96, 25-34
    • (1999) Cell , vol.96 , pp. 25-34
    • Johansson, C.B.1    Momma, S.2    Clarke, D.L.3    Risling, M.4    Lendayl, U.5    Frisen, J.6
  • 26
    • 77955394992 scopus 로고    scopus 로고
    • A novel function for vimentin: The potential biomarker for predicting melanoma hematogenous metastasis
    • Li, M.; Zhang, B.; Sun, B.; Wang, X.; Ban, X.; Sun, T.; Liu, Z.; Zhao, X. A novel function for vimentin: the potential biomarker for predicting melanoma hematogenous metastasis J. Exp. Clin. Cancer Res. 2010, 29, 109
    • (2010) J. Exp. Clin. Cancer Res. , vol.29 , pp. 109
    • Li, M.1    Zhang, B.2    Sun, B.3    Wang, X.4    Ban, X.5    Sun, T.6    Liu, Z.7    Zhao, X.8
  • 27
    • 0035404073 scopus 로고    scopus 로고
    • Expression of S100a, vimentin, NSE, and melan A/MART-1 in seven canine melanoma cell lines and twenty-nine retrospective cases of canine melanoma
    • Koenig, A.; Wojcieszyn, J.; Weeks, B. R.; Modiano, J. F. Expression of S100a, vimentin, NSE, and melan A/MART-1 in seven canine melanoma cell lines and twenty-nine retrospective cases of canine melanoma Vet. Pathol. 2001, 38, 427-435
    • (2001) Vet. Pathol. , vol.38 , pp. 427-435
    • Koenig, A.1    Wojcieszyn, J.2    Weeks, B.R.3    Modiano, J.F.4
  • 28
    • 0035020420 scopus 로고    scopus 로고
    • Caspase cleavage of vimentin disrupts intermediate filaments and promotes apoptosis
    • Byun, Y.; Chen, F.; Chang, R.; Trivedi, M.; Green, K. J.; Cryns, V. L. Caspase cleavage of vimentin disrupts intermediate filaments and promotes apoptosis Cell Death Differ. 2001, 8, 443-450
    • (2001) Cell Death Differ. , vol.8 , pp. 443-450
    • Byun, Y.1    Chen, F.2    Chang, R.3    Trivedi, M.4    Green, K.J.5    Cryns, V.L.6
  • 30
    • 1542289716 scopus 로고    scopus 로고
    • Intermediate filaments control the intracellular distribution of caspases during apoptosis
    • Dinsdale, D.; Lee, J. C.; Dewson, G.; Cohen, G. M.; Peter, M. E. Intermediate filaments control the intracellular distribution of caspases during apoptosis Am. J. Pathol. 2004, 164, 395-407
    • (2004) Am. J. Pathol. , vol.164 , pp. 395-407
    • Dinsdale, D.1    Lee, J.C.2    Dewson, G.3    Cohen, G.M.4    Peter, M.E.5
  • 31
    • 84894581126 scopus 로고    scopus 로고
    • Collective invasion in breast cancer requires a conserved basal epithelial program
    • Cheung, K. J.; Gabrielson, E.; Werb, Z.; Ewald, A. J. Collective invasion in breast cancer requires a conserved basal epithelial program Cell 2013, 155, 1639-1651
    • (2013) Cell , vol.155 , pp. 1639-1651
    • Cheung, K.J.1    Gabrielson, E.2    Werb, Z.3    Ewald, A.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.