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Volumn 9, Issue 4, 2014, Pages 561-575

GPU accelerated segmentation and centerline extraction of tubular structures from medical images

Author keywords

Airway; Centerline extraction; GPU; Parallel; Segmentation; Vessel

Indexed keywords

AIRWAY; ARTICLE; BLOOD VESSEL; BRAIN; COMPUTER ASSISTED TOMOGRAPHY; DIAGNOSTIC IMAGING; DOPPLER FLOWMETRY; GRAPHIC PROCESSING UNIT; IMAGE PROCESSING; LIVER; LUNG; NOISE; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL;

EID: 84908513510     PISSN: 18616410     EISSN: 18616429     Source Type: Journal    
DOI: 10.1007/s11548-013-0956-x     Document Type: Article
Times cited : (55)

References (49)
  • 1
    • 84969419114 scopus 로고    scopus 로고
    • AMD Accelerated Parallel Processing OpenCL Programming Guide
    • AMD. AMD Accelerated Parallel Processing OpenCL Programming Guide. Technical Report December, 2012. http://developer.amd.com/download/AMD_Accelerated_Parallel_Processing_OpenCL_Programming_Guide.pdf. Accessed 4th July 2013
    • (2012) Technical Report December
  • 2
    • 0036462551 scopus 로고    scopus 로고
    • Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction
    • PID: 11929106
    • Aylward SR, Bullitt E (2002) Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction. IEEE Trans Med Imaging 21(2):61–75
    • (2002) IEEE Trans Med Imaging , vol.21 , Issue.2 , pp. 61-75
    • Aylward, S.R.1    Bullitt, E.2
  • 4
    • 54249138766 scopus 로고    scopus 로고
    • A novel approach for detection of tubular objects and its application to medical image analysis. In: Proceedings of the 30th DAGM symposium on pattern recognition. Springer
    • Bauer C, Bischof V (2008) A novel approach for detection of tubular objects and its application to medical image analysis. In: Proceedings of the 30th DAGM symposium on pattern recognition. Springer, pp 163–172
    • (2008) pp 163–172
    • Bauer, C.1    Bischof, V.2
  • 5
    • 84923644732 scopus 로고    scopus 로고
    • Edge based tube detection for coronary artery centerline extraction
    • Bauer C, Bischof H (2008) Edge based tube detection for coronary artery centerline extraction. MIDAS J. http://www.midasjournal.org/browse/publication/577
    • (2008) MIDAS J
    • Bauer, C.1    Bischof, H.2
  • 6
    • 50249113855 scopus 로고    scopus 로고
    • Extracting curve skeletons from gray value images for virtual endoscopy. In: Proceedings of the 4th international workshop on medical imaging and augmented reality. Springer
    • Bauer C, Bischof H (2008) Extracting curve skeletons from gray value images for virtual endoscopy. In: Proceedings of the 4th international workshop on medical imaging and augmented reality. Springer, pp 393–402
    • (2008) pp 393–402
    • Bauer, C.1    Bischof, H.2
  • 10
    • 80053541481 scopus 로고    scopus 로고
    • Tubular structure segmentation based on minimal path method and anisotropic enhancement
    • Benmansour F, Cohen LD (2010) Tubular structure segmentation based on minimal path method and anisotropic enhancement. Int J Comput Vis 92(2):192–210
    • (2010) Int J Comput Vis , vol.92 , Issue.2 , pp. 192-210
    • Benmansour, F.1    Cohen, L.D.2
  • 11
    • 70450189096 scopus 로고    scopus 로고
    • Efficient stream compaction on wide SIMD many-core architectures. In: Proceedings of the conference on high performance graphics
    • Billeter M, Olsson O, Assarsson U (2009) Efficient stream compaction on wide SIMD many-core architectures. In: Proceedings of the conference on high performance graphics, pp 159–166
    • (2009) pp 159–166
    • Billeter, M.1    Olsson, O.2    Assarsson, U.3
  • 12
    • 34848818441 scopus 로고    scopus 로고
    • Segmentation of 3D tubular objects with adaptive front propagation and minimal tree extraction for 3D medical imaging
    • Cohen LD, Deschamps T (2007) Segmentation of 3D tubular objects with adaptive front propagation and minimal tree extraction for 3D medical imaging. Comput Method Biomech Biomed Eng 10(4):289–305
    • (2007) Comput Method Biomech Biomed Eng , vol.10 , Issue.4 , pp. 289-305
    • Cohen, L.D.1    Deschamps, T.2
  • 13
    • 33646452955 scopus 로고    scopus 로고
    • Real-time analysis of ultrasound images using GPU
    • Eidheim O, Skjermo J, Aurdal L (2005) Real-time analysis of ultrasound images using GPU. Int Congr Ser 1281:284–289
    • (2005) Int Congr Ser , vol.1281 , pp. 284-289
    • Eidheim, O.1    Skjermo, J.2    Aurdal, L.3
  • 14
    • 50249111600 scopus 로고    scopus 로고
    • Automatic hepatic vessel segmentation using graphics hardware. In: Proceedings of the 4th international workshop on medical imaging and augmented reality
    • Erdt M, Raspe M, Suehling M (2008) Automatic hepatic vessel segmentation using graphics hardware. In: Proceedings of the 4th international workshop on medical imaging and augmented reality, pp 403–412
    • (2008) pp 403–412
    • Erdt, M.1    Raspe, M.2    Suehling, M.3
  • 16
    • 77950385866 scopus 로고    scopus 로고
    • Robust 3-D airway tree segmentation for image-guided peripheral bronchoscopy
    • PID: 20335095
    • Graham MW, Gibbs JD, Cornish DC (2010) Robust 3-D airway tree segmentation for image-guided peripheral bronchoscopy. IEEE Trans Med Imaging 29(4):982–997
    • (2010) IEEE Trans Med Imaging , vol.29 , Issue.4 , pp. 982-997
    • Graham, M.W.1    Gibbs, J.D.2    Cornish, D.C.3
  • 17
    • 77957922500 scopus 로고    scopus 로고
    • VascuSynth: simulating vascular trees for generating volumetric image data with ground-truth segmentation and tree analysis
    • PID: 20656456
    • Hamarneh G, Jassi P (2010) VascuSynth: simulating vascular trees for generating volumetric image data with ground-truth segmentation and tree analysis. Comput Med Imaging Graph 34(8):605–616
    • (2010) Comput Med Imaging Graph , vol.34 , Issue.8 , pp. 605-616
    • Hamarneh, G.1    Jassi, P.2
  • 18
    • 50649121875 scopus 로고    scopus 로고
    • On the extraction of curve skeletons using gradient vector flow. In: IEEE 11th international conference on computer vision. IEEE
    • Hassouna M., Farag A. (2007) On the extraction of curve skeletons using gradient vector flow. In: IEEE 11th international conference on computer vision. IEEE, pp 1–8
    • (2007) pp 1–8
    • Hassouna, M.1    Farag, A.2
  • 19
    • 77957867784 scopus 로고    scopus 로고
    • Parallel graph component labelling with GPUs and CUDA
    • Hawick K, Leist A, Playne D (2010) Parallel graph component labelling with GPUs and CUDA. Parallel Comput 36(12):655–678
    • (2010) Parallel Comput , vol.36 , Issue.12 , pp. 655-678
    • Hawick, K.1    Leist, A.2    Playne, D.3
  • 20
    • 33845380432 scopus 로고    scopus 로고
    • GPU-based active contour segmentation using gradient vector flow. In: Advances in visual, computing
    • He Z, Kuester F (2006) GPU-based active contour segmentation using gradient vector flow. In: Advances in visual, computing, pp 191–201
    • (2006) pp 191–201
    • He, Z.1    Kuester, F.2
  • 21
    • 84969442035 scopus 로고    scopus 로고
    • Pulmonary vascular tree segmentation from contrast-enhanced CT images. In: Proceedings of the 37th annual workshop of the austrian association for, pattern recognition
    • Helmberger M, Urschler M, Pienn M, Bálint Z, Olschewski A, Bischof H (2013) Pulmonary vascular tree segmentation from contrast-enhanced CT images. In: Proceedings of the 37th annual workshop of the austrian association for, pattern recognition, pp 1–10
    • (2013) pp 1–10
    • Helmberger, M.1    Urschler, M.2    Pienn, M.3    Bálint, Z.4    Olschewski, A.5    Bischof, H.6
  • 22
    • 78049429369 scopus 로고    scopus 로고
    • Implementation of a 3D thinning algorithm
    • Homann H (2007) Implementation of a 3D thinning algorithm. Insight J. http://www.insight-journal.org/browse/publication/181
    • (2007) Insight J
    • Homann, H.1
  • 23
    • 84872228749 scopus 로고    scopus 로고
    • VascuSynth: vascular tree synthesis software
    • Jassi P, Hamarneh G (2011) VascuSynth: vascular tree synthesis software. Insight J. http://www.insight-journal.org/browse/publication/794
    • (2011) Insight J
    • Jassi, P.1    Hamarneh, G.2
  • 25
    • 28644434715 scopus 로고    scopus 로고
    • A review of vessel extraction techniques and algorithms
    • Kirbas C, Quek F (2004) A review of vessel extraction techniques and algorithms. ACM Comput Surv 36(2):81–121
    • (2004) ACM Comput Surv , vol.36 , Issue.2 , pp. 81-121
    • Kirbas, C.1    Quek, F.2
  • 26
    • 0034321042 scopus 로고    scopus 로고
    • Model-based detection of tubular structures in 3D images
    • Krissian K, Malandain G, Ayache N (2000) Model-based detection of tubular structures in 3D images. Comput Vis Image Underst 80(2):130–171
    • (2000) Comput Vis Image Underst , vol.80 , Issue.2 , pp. 130-171
    • Krissian, K.1    Malandain, G.2    Ayache, N.3
  • 27
    • 0033723216 scopus 로고    scopus 로고
    • Automated extraction of bronchus from 3D CT images of lung based on genetic algorithm and 3D region growing
    • Law T-Y, Heng PA (2000) Automated extraction of bronchus from 3D CT images of lung based on genetic algorithm and 3D region growing. Proc SPIE 3979:906–916
    • (2000) Proc SPIE , vol.3979 , pp. 906-916
    • Law, T.-Y.1    Heng, P.A.2
  • 28
    • 0028550697 scopus 로고
    • Building skeleton models via 3-D medial surface/axis thinning algorithms
    • Lee T, Kashyap R, Chu C (1994) Building skeleton models via 3-D medial surface/axis thinning algorithms. CVGIP Graph Model Image Processing 56(6):462–478
    • (1994) CVGIP Graph Model Image Processing , vol.56 , Issue.6 , pp. 462-478
    • Lee, T.1    Kashyap, R.2    Chu, C.3
  • 29
    • 70350345530 scopus 로고    scopus 로고
    • A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes
    • PID: 19818675
    • Lesage D, Angelini ED, Bloch I, Funka-Lea G (2009) A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes. Med Image Anal 13(6):819–845
    • (2009) Med Image Anal , vol.13 , Issue.6 , pp. 819-845
    • Lesage, D.1    Angelini, E.D.2    Bloch, I.3    Funka-Lea, G.4
  • 30
    • 34548523351 scopus 로고    scopus 로고
    • Vessels as 4-D curves: global minimal 4-D paths to extract 3-D tubular surfaces and centerlines
    • Li H, Yezzi A (2007) Vessels as 4-D curves: global minimal 4-D paths to extract 3-D tubular surfaces and centerlines. IEEE Trans Med Imaging 29(9):1213–1223
    • (2007) IEEE Trans Med Imaging , vol.29 , Issue.9 , pp. 1213-1223
    • Li, H.1    Yezzi, A.2
  • 31
    • 84969413287 scopus 로고    scopus 로고
    • Extraction of airways from CT (EXACT’09). In: Second international workshop on pulmonary image, analysis
    • Lo P, Ginneken BV, Reinhardt JM, de Bruijne M (2009) Extraction of airways from CT (EXACT’09). In: Second international workshop on pulmonary image, analysis, pp 175–189
    • (2009) pp 175–189
    • Lo, P.1    Ginneken, B.V.2    Reinhardt, J.M.3    de Bruijne, M.4
  • 32
    • 77955572447 scopus 로고    scopus 로고
    • Vessel-guided airway tree segmentation: a voxel classification approach
    • PID: 20395163
    • Lo P, Sporring J, Ashraf H, Pedersen JJH, de Bruijne M (2010) Vessel-guided airway tree segmentation: a voxel classification approach. Med Image Anal 14(4):527–538
    • (2010) Med Image Anal , vol.14 , Issue.4 , pp. 527-538
    • Lo, P.1    Sporring, J.2    Ashraf, H.3    Pedersen, J.J.H.4    de Bruijne, M.5
  • 33
    • 0033713055 scopus 로고    scopus 로고
    • Codimension-two geodesic active contours for the segmentation of tubular structures
    • Lorigo L, Faugeras O (2000) Codimension-two geodesic active contours for the segmentation of tubular structures. Comput Vis Pattern Recognit, 444–451
    • (2000) Comput Vis Pattern Recognit , pp. 444-451
    • Lorigo, L.1    Faugeras, O.2
  • 34
    • 0032008619 scopus 로고    scopus 로고
    • A survey of medical image registration
    • Maintz JBA, Viergever MA (1998) A survey of medical image registration. Med Image Anal 2(1):1–36
    • (1998) Med Image Anal , vol.2 , Issue.1 , pp. 1-36
    • Maintz, J.B.A.1    Viergever, M.A.2
  • 36
    • 77749291911 scopus 로고    scopus 로고
    • Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation
    • PID: 20199906
    • Narayanaswamy A, Dwarakapuram S, Bjornsson CS, Cutler BM, Shain W, Roysam B (2010) Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation. IEEE Trans Med Imaging 29(3):583–597
    • (2010) IEEE Trans Med Imaging , vol.29 , Issue.3 , pp. 583-597
    • Narayanaswamy, A.1    Dwarakapuram, S.2    Bjornsson, C.S.3    Cutler, B.M.4    Shain, W.5    Roysam, B.6
  • 37
    • 84957537256 scopus 로고    scopus 로고
    • NVIDIA. OpenCL Best Practices Guide. Technical report, 2010. Accessed 4. July 2013
    • NVIDIA. OpenCL Best Practices Guide. Technical report, 2010. http://www.nvidia.com/content/cudazone/CUDABrowser/downloads/papers/NVIDIA_OpenCL_BestPracticesGuide.pdf Accessed 4. July 2013
  • 38
    • 35448934785 scopus 로고    scopus 로고
    • Clinical validation of vessel-based registration for correction of brain-shift
    • COI: 1:STN:280:DC%2BD2snksVGjsQ%3D%3D, PID: 17681484
    • Reinertsen I, Lindseth F, Unsgaard G, Collins DL (2007) Clinical validation of vessel-based registration for correction of brain-shift. Med Image Anal 11(6):673–684
    • (2007) Med Image Anal , vol.11 , Issue.6 , pp. 673-684
    • Reinertsen, I.1    Lindseth, F.2    Unsgaard, G.3    Collins, D.L.4
  • 39
    • 84888875662 scopus 로고    scopus 로고
    • A survey of GPU-based medical image computing techniques
    • PID: 23256080
    • Shi L, Liu W, Zhang H, Xie Y, Wang D (2012) A survey of GPU-based medical image computing techniques. Quant Imaging Med Surg 2(3):188–206
    • (2012) Quant Imaging Med Surg , vol.2 , Issue.3 , pp. 188-206
    • Shi, L.1    Liu, W.2    Zhang, H.3    Xie, Y.4    Wang, D.5
  • 40
    • 33645683455 scopus 로고    scopus 로고
    • Computer analysis of computed tomography scans of the lung: a survey
    • PID: 16608056
    • Sluimer I, Schilham A, Prokop M, van Ginneken B (2006) Computer analysis of computed tomography scans of the lung: a survey. IEEE Trans Med Imaging 25(4):385–405
    • (2006) IEEE Trans Med Imaging , vol.25 , Issue.4 , pp. 385-405
    • Sluimer, I.1    Schilham, A.2    Prokop, M.3    van Ginneken, B.4
  • 41
    • 84896297299 scopus 로고    scopus 로고
    • GPU-based airway segmentation and centerline extraction for image guided bronchoscopy. In Norsk informatikkonferanse
    • Smistad E, Elster AC, Lindseth F (2012) GPU-based airway segmentation and centerline extraction for image guided bronchoscopy. In Norsk informatikkonferanse. Akademika forlag, pp 129–140
    • (2012) Akademika forlag , pp. 129-140
    • Smistad, E.1    Elster, A.C.2    Lindseth, F.3
  • 42
    • 84957561049 scopus 로고    scopus 로고
    • Lindseth F, Real-time gradient vector flow on GPUs using OpenCL. J Real-Time Image Processing
    • Smistad E, Elster AC, Lindseth F (2012) Real-time gradient vector flow on GPUs using OpenCL. J Real-Time Image Processing. http://link.springer.com/article/10.1007%2Fs11554-012-0257-6
    • (2012) Elster AC
    • Smistad, E.1
  • 43
    • 84969421504 scopus 로고    scopus 로고
    • Real-time surface extraction and visualization of medical images using OpenCL and GPUs. In: Norsk informatikkonferanse. Akademika forlag
    • Smistad E, Elster AC, Lindseth F (2012) Real-time surface extraction and visualization of medical images using OpenCL and GPUs. In: Norsk informatikkonferanse. Akademika forlag, pp 141–152
    • (2012) pp 141–152
    • Smistad, E.1    Elster, A.C.2    Lindseth, F.3
  • 44
    • 33745126654 scopus 로고    scopus 로고
    • Székely G (2006) Fast and robust extraction of centerlines in 3D tubular structures using a scattered–snakelet approach
    • Spuhler C, Harders M, Székely G (2006) Fast and robust extraction of centerlines in 3D tubular structures using a scattered–snakelet approach. Proc SPIE 6144, March 2006
    • (2006) Proc SPIE , pp. 6144
    • Spuhler, C.1    Harders, M.2
  • 47
    • 0032028944 scopus 로고    scopus 로고
    • Snakes, shapes, and gradient vector flow
    • COI: 1:STN:280:DC%2BD1c7hslKmtQ%3D%3D
    • Xu C, Prince J (1998) Snakes, shapes, and gradient vector flow. IEEE Trans Image Processing 7(3):359–369
    • (1998) IEEE Trans Image Processing , vol.7 , Issue.3 , pp. 359-369
    • Xu, C.1    Prince, J.2
  • 48
    • 84869791491 scopus 로고    scopus 로고
    • A fast GVF snake algorithm on the GPU
    • Zheng Z, Zhang R (2012) A fast GVF snake algorithm on the GPU. Res J Appl Sci Eng Technol 4(24):5565–5571
    • (2012) Res J Appl Sci Eng Technol , vol.4 , Issue.24 , pp. 5565-5571
    • Zheng, Z.1    Zhang, R.2
  • 49
    • 84969422207 scopus 로고    scopus 로고
    • On-the-fly point clouds through histogram pyramids. In Vision, modeling, and visualization 2006: proceedings, Nov 22–24, 2006. IOS Press, Aachen
    • Ziegler G, Tevs A, Theobalt C, Seidel H (2006) On-the-fly point clouds through histogram pyramids. In Vision, modeling, and visualization 2006: proceedings, Nov 22–24, 2006. IOS Press, Aachen, Germany, pp 137
    • (2006) Germany , pp. 137
    • Ziegler, G.1    Tevs, A.2    Theobalt, C.3    Seidel, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.