Microbial diversity in an Oxisol under no-tillage and conventional tillage in southern Brazil

Revista Ciencia Agronomica

Volumn 45, Issue 5, 2014, Pages 863-870

  Babujia, Letícia Carlos ^a   Silva, Adriana Pereira ^b   Nogueira, Marco Antonio ^b   Hungria, Mariangela ^b  

^a STATE UNIVERSITY OF MARINGÁ   (Brazil)

^b EMBRAPA CERRADOS   (Brazil)

Author keywords

Bacterial diversity; Fungal diversity; PCR DGGE; Soil tillage

Indexed keywords

BACTERIA (MICROORGANISMS); GLYCINE MAX; TRITICUM AESTIVUM;

EID: 84908212725     PISSN: 00456888     EISSN: 18066690     Source Type: Journal    
DOI: 10.1590/s1806-66902014000500001     Document Type: Article

References (35)

1. BABUJIA, L. C. et al. Microbial biomass and activity at various soil depths in a Brazilian oxisol after two decades of no-tillage and conventional tillage. Soil Biology and Biochemistry, v. 43, p. 1-8, 2010.
2. BALOTA, E. L. et al. Enzimas e seu papel na qualidade do solo. In: ARAÚJO, A.P.; ALVES, B.J.R. (Eds.). Tópicos em Ciência do Solo, Viçosa: Sociedade Brasileira de Ciência do Solo, v. 8, p. 189-249, 2013.
3. BOND-LAMBERTY, B.; WANG, C. K.; GOWER, S. T. A global relationship between the heterotrophic and autotrophic components of soil respiration? Global Change Biology, v. 10, p. 1756-1766, 2004.
4. CHAO, A.; LEE, S. M. Estimating the Number of Classes via Sample Coverage. Journal of the American Statistical Association, v. 87, n. 417, p. 210-217, 1992.
5. CHAO A.; SHEN T. J. 2013. Program SPADE (Species Prediction and Diversity Estimation). Program and user's guide; [accessed 09/2013]. Available from http://chao.stat.nthu.edu.tw.
6. CORNEJO, P.; RUBIO, R.; BORIE, F. Mycorrhizal propagule persistence in a succession of cereals in a disturbed and undisturbed andisol fertilized with two nitrogen sources. Chilean Journal of Agricultural Research, v. 69, p. 426-434, 2009.
7. FEBRAPDP (FEDERAÇÃO BRASILEIRA DE PLANTIO DIRETO NA PALHA). Evolução da Área Cultivada no Sistema de Plantio Direto na Palha e Brasil. 2010. Disponível em:. Acesso em: out. 2012.
8. FRANZLUEBBERS, A. J. Soil organic matter stratification ratio as an indicator of soil quality. Soil & Tillage Research, v. 66, n. 2, p. 95-106, 2002.
9. FUKA, M. et al. Changes of diversity pattern of proteolytic bacteria over time and space in an agricultural soil. Microbial Ecology, v. 57, n.3, p. 391-401, 2009.
10. HANSEL, C. M. et al. Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Applied & Environmental Microbiology, v. 74, n. 5, p. 1620-1633, 2008.
11. HUNGRIA M. et al. Preliminary characterization of fast growing strains isolated from soybean nodules in Brazil. Soil Biology & Biochemistry, v.33, p.1349-1361, 2001.
12. HUNGRIA, M. et al. Soil microbial activity and crop sustainability in a long-term experiment with three soil tillage and two crop-rotation systems. Applied Soil Ecology, v. 42, n. 3, p. 288-296, 2009.
13. JOYNT, J. et al. Microbial community analysis of soils contaminated with lead, chromium and organic solvents. Microbiology Ecology, v. 51, p. 209-219, 2006.
14. KASCHUK, G.; ALBERTON, O.; HUNGRIA, M. Three decades of soil microbial biomass studies in Brazilian ecosystems: lessons learned about soil quality and indications for improving sustainability. Soil Biology & Biochemistry, v. 42, p. 1-13, 2010.
15. KENNEDY, A. C. Bacterial diversity in agroecosystems. Agriculture, Ecosystems and Environmental, v. 170, n. 1, p. 145-156, 2003.
16. KHIARA, J. et al. Soil aggregation and total diversity of bacteria and fungi in various tillage systems of sub-humid and semi-arid Kenya. Applied Soil Ecology, v. 58, p. 12-20, 2012.
17. LAL, R. Constraints to adopting no-till farming in developing countries. Soil & Tillage Research, v. 94, n. 1, p. 1-3, 2007.
18. LÓPEZ-GUARRIDO, R. et al. Tillage influence on biophysical soil properties: The example of a long-term tillage experiment under Mediterranean rainfed conditions in South Spain. Soil & Tillage Research, v. 118, p. 52-60, 2012.
19. MUYZER, G.; WALL, E. C.; UITTERLINDEN, A. G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes coding for 16S rRNA. Applied and Enviromental Microbiology, v. 59, n. 3, p. 695-700, 1993.
20. NAKATANI, A. S. et al. Changes in the genetic structure of bacteria and microbial activity in an agricultural soil amended with tannery sludge. Soil Biology & Biochemistry, v. 43, p. 106-114, 2011.
21. NÜBEL, U. et al. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. Journal of Bacteriology, v. 178, n. 19, p. 5636-5643, 1996.
22. POWLSON, D. S. The soil microbial biomass: before, beyond and back. In: K. RITZ, J.; DIGHTON, K. E. GILLER (Eds.), Beyond the Biomass, Chichester, NY, 1994, pp. 3-20.
23. SHANNON, C. E.; WEAVER, W. The Mathematical Theory of Communication. Urbana: University of Illinois Press, 1963. 173 p.
24. SILVA, A. P. et al. Microbial biomass under various soiland crop- management systems in short- and long- term experiments in Brazil. Field Crops Research, v. 119, p. 20-26, 2010.
25. SILVA, A. P. et al. Bacterial diversity under different tillage and crop rotation systems in an Oxisol of southern Brazil. The Open Agriculture Journal, v. 7, p. 40-47, 2013.
26. SMITH, J. L.; DORAN, J. W. Measurement and use of pH and electrical conductivity for soil quality analysis. In Methods for assessing soil quality. Soil Science Society of America Special Publication, v. 49, p. 169-182, 1996.
27. SMIT, E. et al. Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18S rRNA and temperature gradient gel electrophoresis. Applied and Environmental Microbiology, v. 65, p. 2614-2621, 1999.
28. SNEATH, P. H. A.; SOKAL, R. R. Numerical taxonomy: the principles and practice of numerical classification. San Francisco: W. H. Freeman, 1973. 573 p.
29. SOUZA, R. C. et al. Soil metagenomics reveals differences under conventional and no-tillage with crop rotation or succession. Applied Soil Ecology, v. 72, p. 49-61, 2013.
30. WAKELIN, S. A. et al. Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils. Soil Biology & Biochemistry, v. 40, p. 803-813, 2008.
31. WANG, J. Z.; CUI, L. J.; WANG, Y. Growth, lipid peroxidation and photosynthesis in two tall fescue cultivars differing in heat tolerance. Biologia Plantarum, v. 53, n. 2, p. 237-242, 2009.
32. WANG, Y. et al. Tillage, residue burning and crop rotation alter soil fungal community and water-stable aggregation in arable fields. Soil & Tillage Research, v. 107, p. 71-79, 2010.
33. WARDLE, D. A. Is "sampling effect" a problem for experiments investigating biodiversity-ecosystem function relationships? Oikos, v. 8, p. 403-407, 1999.
34. WEISBURG, W. G. et al. 16S ribosomal DNA amplification for phylogenetic study. Journal of Bacteriology, v. 173, n. 2, p. 697-703, 1991.
35. WHITE, T. J. et al. Analysis of phylogenetic relationships by amplification and direct sequencing of ribosomal RNA genes. In: INNIS, M. A.; GELFAND, D. H.; SNINSKY, J. J.; WHITE, T. J. (Eds.). PCR protocols: a guide to methods and applications. New York: Academic Press, 1990. p. 315-322.