Newly identified pathogens associated with periodontitis: A systematic review

Journal of Dental Research

Volumn 93, Issue 9, 2014, Pages 846-858

  Perez Chaparro P J ^a   Goncalves C ^a   Figueiredo, L C ^a   Faveri, M ^a   Lobao E ^a   Tamashiro, N ^a   Duarte, P ^a   Feres, M ^a  

^a GUARULHOS UNIVERSITY   (Brazil)

Author keywords

Archaea; Bacteria; dental plaque; DNA; microbiology; periodontal disease

Indexed keywords

DNA;

ARCHAEON; BACTERIUM; BACTEROIDETES; CLASSIFICATION; GRAM NEGATIVE ANAEROBIC BACTERIA; GRAM NEGATIVE BACTERIUM; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; PERIODONTAL DISEASE; PERIODONTITIS; PERIODONTIUM; PHYLOGENY; PROTEOBACTERIA; REVIEW; SPIROCHETE; TOOTH PLAQUE;

ARCHAEA; BACTERIA; DENTAL PLAQUE; DNA; MICROBIOLOGY; PERIODONTAL DISEASE;

ARCHAEA; BACTERIA; BACTEROIDETES; DENTAL PLAQUE; GRAM-NEGATIVE ANAEROBIC BACTERIA; GRAM-NEGATIVE BACTERIA; HUMANS; PERIODONTITIS; PERIODONTIUM; PHYLOGENY; PROTEOBACTERIA; SPIROCHAETALES;

EID: 84908046104     PISSN: 00220345     EISSN: 15440591     Source Type: Journal    
DOI: 10.1177/0022034514542468     Document Type: Review

References (60)

1. Abiko Y, Sato T, Mayanagi G, Profiling TN. Profiling of subgingival plaque biofilm microflora from periodontally healthy subjects and from subjects with periodontitis using quantitative real-time PCR. J Periodontal Res. 2010 ; 45: 389-395
2. Abusleme L, Dupuy AK, Dutza N, Silva N, Burleson JA, Strasbaugh LD, et al. The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation. ISME J. 2013 ; 7: 1016-1025
3. Asai Y, Jinno T, Igarashi H, Ohyama Y, Ogawa T. Detection and quantification of oral treponemes in subgingival plaque by real-time PCR. J Clin Microbial. 2002 ; 40: 3334-3340
4. Booth V, Downes J, Van den Berg J, Wade WG. Gram-positive anaerobic bacilli in human periodontal disease. J Periodontal Res. 2004 ; 39: 213-220
5. Bringuier A, Khelaifia S, Richet H, Aboudharam G, Drancourt M. Real-time PCR quantification of Methanobrevibacter oralis in periodontitis. J Clin Microbiol. 2013 ; 51: 993-994
6. Brinig MM, Lepp PW, Ouverney CC, Armitage GC, Relman DA. Prevalence of bacteria of division TM7 in human subgingival plaque and their association with disease. Appl Environ Microbiol. 2003 ; 69: 1687-1694
7. Canabarro A, Valle C, Farias MR, Santos FB, Lazera M, Wanke B. Association of subgingival colonization of Candida albicans and other yeasts with severity of chronic periodontitis. J Periodontal Res. 2012 ; 48: 428-432
8. Colombo AP1, Teles RP, Torres MC, Souto R, Rosalém WJ, Mendes MC, et al. Subgingival Microbiota of Brazilian subjects with untreated chronic periodontitis. J Periodontol. 2002 ; 73: 360-369
9. Darveau RP. Periodontitis: a polymicrobial disruption of host homeostasis. Nat Rev Microbiol. 2010 ; 7: 481-490
10. da Silva-Boghossian CM, do Souto RM, Luiz RR, Colombo AP. Association of red complex, A. actinomycetemcomitans and non-oral bacteria with periodontal diseases. Arch Oral Biol. 2011 ; 56: 899-906
11. Dewhirst FE, Tamer MA, Ericson RE, Lau CN, Levanos VA, Boches SK, et al. The diversity of periodontal spirochetes by 16S rRNA analysis. Oral Microbiol Immunol. 2000 ; 15: 196-202
12. Drescher J, Schlafer S, Schaudinn C, Riep B, Neumann K, Friedmann A, et al. Molecular epidemiology and spatial distribution of Selenomonas cranspp. in subgingival biofilms. Eur J Oral Sci. 2010 ; 118: 466-474
13. Fredricks DN, Fiedler TL, Marrazzo JM. Molecular identification of bacteria associated with bacterial vaginosis. N Engl J Med. 2005 ; 353: 1899-1911
14. Gonçalves LF, Fermiano D, Feres M, Figueiredo LC, Teles FR, Mayer MP, et al. Levels of Selenomonas species in generalized aggressive periodontitis. J Periodontal Res. 2012 ; 47: 711-718
15. Griffen AL, Beall CJ, Campbell JH, Firestone ND, Kumar PS, Yang ZK, et al. Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. ISME J. 2012 ; 6: 1176-1185
16. Haffajee AD, Bogren A, Hasturk H, Feres M, Lopez NJ, Socransky SS. Subgingival microbiota of chronic periodontitis subjects from different geographic locations. J Clin Periodontol. 2004 ; 31: 996-1002
17. Haffajee AD, Socransky SS. Introduction to microbial aspects of periodontal biofilm communities, development and treatment. Periodontol. 2006 2000 ; 42: 7-12
18. Hajishengallis G, Lamont RJ. Beyond the red complex and into more complexity: the polymicrobial synergy and dysbiosis (PSD) model of periodontal disease etiology. Mol Oral Microbiol. 2012 ; 27: 409-419
19. Hajishengallis G, Liang S, Payne MA, Hashim A, Jotwani R, Eskan MA, et al. Low-abundance biofilm species orchestrates inflammatory periodontal disease through the commensal microbiota and complement. Cell Host Microbe. 2011 ; 10: 497-506
20. Harper-Owen R, Dymock D, Booth V, Weightman AJ, Wade WG. Detection of unculturable bacteria in periodontal health and disease by PCR. J Clin Microbiol. 1999 ; 37: 1469-1473
21. Horz HP, Citron DM, Warren YA, Goldstein EJC, Conrads G. Synergistes group organisms of human origin. J Clin Microbiol. 2006 ; 44: 2914-2920
22. Hutter G. Molecular analysis of bacteria in periodontitis: evaluation of clone libraries, novel phylotypes and putative pathogens. Microbiology. 2003 ; 149: 67-75
23. Kuehbacher T, Rehman A, Lepage P, Hellmig S, Fölsch UR, Schreiber S, et al. Intestinal TM7 bacterial phylogenies in active inflammatory bowel disease. J Med Microbiol. 2008 ; 57: 1569-1576
24. Kumar PS, Griffen AL, Barton JA, Paster BJ, Moeschberger ML, Leys EJ. New bacterial species associated with chronic periodontitis. J Dent Res. 2003 ; 82: 338-344
25. Kumar PS, Griffen AL, Moeschberger ML, Leys EJ. Identification of candidate periodontal pathogens and beneficial species by quantitative 16S clonal analysis. J Clin Microbiol. 2005 ; 43: 3944-3955
26. Ledder RG, Gilbert P, Huws SA, Aarons L, Ashley MP, Hull PS, et al. Molecular analysis of the subgingival microbiota in health and disease. Appl Environ Microbiol. 2007 ; 73: 516-523
27. Lepp PW, Brinig MM, Ouverney CC, Palm K, Armitage GC, Relman DA. Methanogenic Archaea and human periodontal disease. Proc Natl Acad Sci USA. 2004 ; 101: 6176-6181
28. Leys EJ, Lyons SR, Moeschberger ML, Rumpf RW, Griffen AL. Association of Bacteroides forsythus and a novel Bacteroides phylotype with periodontitis. J Clin Bacteriol. 2002 ; 10: 821-825
29. Li CL, Liang JP, Jiang YT. Association of uncultivated oral phylotypes AU126 and X112 with periodontitis. Oral Dis. 2006 ; 12: 371-374
30. Li CL, Liu DL, Jiang YT, Zhou YB, Zhang MZ, Jiang W, et al. Prevalence and molecular diversity of Archaea in subgingival pockets of periodontitis patients. Oral Microbiol Immunol. 2009 ; 24: 343-346
31. Liu B, Faller LL, Klitgord N, Mazumdar V, Ghodsi M, Sommer DD, et al. Deep sequencing of the oral microbiome reveals signatures of periodontal disease. PLoS One. 2012 ; 7: e37919
32. Macuch PJ, Tanner AC. Campylobacter species in health, gingivitis and periodontitis. J Dent Res. 2000 ; 79: 785-792
33. Marsh PD. Are dental diseases examples of ecological catastrophes?. Microbiology. 2003 ; 149: 279-294
34. Matarazzo F, Ribeiro AC, Feres M, Faveri M, Mayer MP. Diversity and quantitative analysis of Archaea in aggressive periodontitis and periodontally healthy subjects. J Clin Periodontol. 2011 ; 38: 621-627
35. Mayanagi G, Sato T, Shimauchi H, Takahashi N. Detection frequency of periodontitis-associated bacteria by polymerase chain reaction in subgingival and supragingival plaque of periodontitis and healthy subjects. Oral Microbiol Immunol. 2004 ; 19: 379-385
36. McCarthy LR, Carlson JR. Selenomonas sputigena septicemia. J Clin Microbiol. 1981 ; 14: 684-685
37. Moher D, Liberati A, Tetzlaff J, Altman DG. Preferred reporting items for systematic reviews and meta-analyses: the PRISMA statement. J Clin Epidemiol. 2009 ; 62: 1006-1012
38. Murdoch FE, Sammons RL, Chapple IL. Isolation and characterization of subgingival staphylococci from periodontitis patients and controls. Oral Dis. 2004 ; 10: 155-162
39. Ouverney CC, Armitage GC, Relman DA. Single-cell enumeration of an uncultivated TM7 subgroup in the human subgingival crevice. Appl Eviron Microbiol. 2003 ; 69: 6294-6298
40. Paster BJ, Boches SK, Galvin JL, Ericson RE, Lau CN, Levanos VA, et al. Bacterial diversity in human subgingival plaque. J Bacteriol. 2001 ; 183: 3770-3783
41. Proceedings of the 1996 World Workshop in Periodontics ; 1996 Lansdowne, Virginia ; 1996. 1.
42. Riep B, Edesi-Neuss L, Claessen F, Skarabis H, Ehmke B, Flemmig TF, et al. Are putative periodontal pathogens reliable diagnostic markers?. J Clin Microbiol. 2009 ; 47: 1705-1711
43. Riviere GR, Riviere KH, Smith KS. Molecular and immunological evidence of oral Treponema in the human brain and their association with Alzheimer's disease. Oral Microbiol Immunol. 2002 ; 17: 113-118
44. Sawada S, Kokeguchi S, Takashiba S, Murayama Y. Development of 16S rDNA-based PCR assay for detecting Centipeda periodontii and Selenomonas sputigena. Lett Appl Microbiol. 2000 ; 30: 423-426
45. Schlafer S, Riep B, Griffen AL, Petrich A, Hübner J, Berning M, et al. Filifactor alocis-involvement in periodontal biofilms. BMC Microbiol. 2010 ; 10: 66
46. Socransky SS. Criteria for the infectious agents in dental caries and periodontal disease. J Clin Periodontol. 1979 ; 6: 16-21
47. Socransky SS, Haffajee AD. Periodontal microbial ecology. Periodontol. 2005 ; 2000: 38 135-187
48. Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL. Microbial complexes in subgingival plaque. J Clin Periodontol. 1998 ; 25: 134-144
49. Souto R, Colombo AP. Prevalence of Enterococcus faecalis in subgingival biofilm and saliva of subjects with chronic periodontal infection. Arch Oral Biol. 2008 ; 53: 155-160
50. SoutoRAndradeAFUzedaMColomboAP (2006). Prevalence of "non-oral" pathogenic bacteria in subgingival biofilm of subjects with chronic periodontitis. Braz J Microbiol37:208-215. URL accessed on 5/12/2014 at: http://www.scielo.br/pdf/bjm/v37n3/v37n3a02.pdf.
51. Teles FRF, Teles RP, Siegelin Y, Paster B, Haffajee AD, Socransky SS. RNA-oligonucleotide quantification technique (ROQT) for the enumeration of uncultivated bacterial species in subgingival biofilms. Mol Oral Microbiol. 2011 ; 26: 127-139
52. Teles R, Teles F, Frias-Lopez J, Paster B, Haffajee A. Lessons learned and unlearned in periodontal microbiology. Periodontol. 2013 ; 2000: 62 95-162
53. Vartoukian SR, Palmer RM, Wade WG. Diversity and morphology of members of the phylum "Synergistetes" in periodontal health and disease. Appl Environ Microbiol. 2009 ; 75: 3777-3786
54. Vianna ME, Holtgraewe S, Seyfarth I, Conrads G, Horz HP. Quantitative analysis of three hydrogenotrophic microbial groups, methanogenic archaea, sulfate-reducing bacteria, and acetogenic bacteria, within plaque biofilms associated with human periodontal disease. J Bacteriol. 2008 ; 190: 3779-3785
55. Vu J, Carvalho J. Enterococcus: review of its physiology, pathogenesis, diseases and the challenges it poses for clinical microbiology. Front Biol (Beijing). 2011 ; 6: 357-366
56. Wang QQ, Zhang CF, Chu CH, Zhu XF. Prevalence of Enterococcus faecalis in saliva and filled root canals of teeth associated with apical periodontitis. Int J Oral Sci. 2012 ; 4: 19-23
57. Willis SG1, Smith KS, Dunn VL, Gapter LA, Riviere KH, Riviere GR. Identification of seven Treponema species in health- and disease-associated dental plaque by nested PCR. J Clin Microbiol. 1999 ; 37: 867-869
58. You M, Mo S, Leung WK, Watt RM. Comparative analysis of oral treponemes associated with periodontal health and disease. BMC Infect Dis. 2013a ; 13: 174
59. You M, Mo S, Watt RM, Leung WK. Prevalence and diversity of Synergistetes taxa in periodontal health and disease. J Periodontal Res. 2013b ; 48: 159-168
60. Zijnge V, Harmsen HJ, Kleinfelder JW, van der Rest ME, Degener JE, Welling GW. Denaturing gradient gel electrophoresis analysis to study bacterial community structure in pockets of periodontitis patients. Oral Microbiol Immunol. 2003 ; 18: 59-65