-
1
-
-
0037174670
-
Network motifs: Simple building blocks of complex networks
-
R. Milo, S. Shen-Orr, S. Itzkovitz, N. Kashtan, D. Chklovskii, and U. Alon, "Network motifs: Simple building blocks of complex networks," Science, vol. 298, pp. 824-887, 2002.
-
(2002)
Science
, vol.298
, pp. 824-887
-
-
Milo, R.1
Shen-Orr, S.2
Itzkovitz, S.3
Kashtan, N.4
Chklovskii, D.5
Alon, U.6
-
2
-
-
39649124450
-
What is a complex graph
-
Available
-
J. Kim and T. Wilhelm, (2008). What is a complex graph.Physica A: Statist. Mech. Appl. [Online]. 387(11), pp. 2637-2652. Available: http://www.sciencedirect.com/science/article/pii/S0378437108000319
-
(2008)
Physica A: Statist. Mech. Appl. [Online]
, vol.387
, Issue.11
, pp. 2637-2652
-
-
Kim, J.1
Wilhelm, T.2
-
3
-
-
42549148783
-
Web appearance disambiguation of personal names based on network motif
-
[Online]. Available
-
K.-H. Yang, K.-Y. Chiou, H.-M. Lee, and J.-M. Ho. (2006). "Web appearance disambiguation of personal names based on network motif." in Proc. IEEE/WIC/ACM Int. Conf. Web Intell., pp. 386-389. [Online]. Available: http://dx.doi.org/10.1109/WI.2006.189
-
(2006)
Proc. IEEE/WIC/ACM Int. Conf. Web Intell.
, pp. 386-389
-
-
Yang, K.-H.1
Chiou, K.-Y.2
Lee, H.-M.3
Ho, J.-M.4
-
4
-
-
77951575957
-
Using network motifs to identify application protocols
-
[Online]. Available
-
E. G. Allan, Jr., W. H. Turkett, Jr., and E. W. Fulp (2009). "Using network motifs to identify application protocols." in Proc. 28th IEEE Conf. Global Telecommun., pp. 4266-4272. [Online]. Available: http://portal.acm.org/citation.cfm?id=1811982.1812090
-
(2009)
Proc. 28th IEEE Conf. Global Telecommun.
, pp. 4266-4272
-
-
Allan, E.G.1
Turkett, W.H.2
Fulp, E.W.3
-
5
-
-
2942606066
-
Structure and evolution of transcriptional regulatory networks
-
Available
-
M. M. Babu, N. M. Luscombe, L. Aravind, M. Gerstein, and S. A. Teichmann, (2001). "Structure and evolution of transcriptional regulatory networks." Current Opinion Struct. Biol. [Online]. 14(3), pp. 283-291. Available: http://www.sciencedirect.com/science/article/pii/S0959440X04000788
-
(2001)
Current Opinion Struct. Biol. [Online]
, vol.14
, Issue.3
, pp. 283-291
-
-
Babu, M.M.1
Luscombe, N.M.2
Aravind, L.3
Gerstein, M.4
Teichmann, S.A.5
-
6
-
-
0037743679
-
Convergent evolution of gene circuits
-
Jul.. Available
-
G. C. Conant and A. Wagner, (2003, Jul.). Convergent evolution of gene circuits. Nature Genetics [Online]. 34(3), pp. 264-266. Available: http://dx.doi.org/10.1038/ng1181
-
(2003)
Nature Genetics [Online]
, vol.34
, Issue.3
, pp. 264-266
-
-
Conant, G.C.1
Wagner, A.2
-
7
-
-
84863282838
-
-
Dept. Molecular Cell Biol. Comput. Sci. Appl. Math., Weizman Inst. Sci., Rehovot, Israel, Tech. Rep.
-
N. Kashtan, S. Itzkovitz, R. Milo, and U. Alon, "Network motif detection tool: Mfinder tool guide," Dept. Molecular Cell Biol. Comput. Sci. Appl. Math., Weizman Inst. Sci., Rehovot, Israel, Tech. Rep., 2005.
-
(2005)
Network Motif Detection Tool: Mfinder Tool Guide
-
-
Kashtan, N.1
Itzkovitz, S.2
Milo, R.3
Alon, U.4
-
8
-
-
4444268694
-
Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs
-
Jul.. Available
-
N. Kashtan, S. Itzkovitz, R. Milo, and U. Alon, (2004, Jul.). Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs. Bioinformatics, [Online]. 20(11), pp. 1746-1758. Available: http://dx.doi.org/10.1093/bioinformatics/bth163
-
(2004)
Bioinformatics, [Online]
, vol.20
, Issue.11
, pp. 1746-1758
-
-
Kashtan, N.1
Itzkovitz, S.2
Milo, R.3
Alon, U.4
-
9
-
-
33749543885
-
Nemofinder: Dissecting genome-wide protein-protein interactions with mesoscale network motifs
-
[Online]. Available
-
J. Chen, W. Hsu, M. L. Lee, and S.-K. Ng. (2006). "Nemofinder: Dissecting genome-wide protein-protein interactions with mesoscale network motifs," in Proc. 12th ACM SIGKDD Int. Conf. Knowl. Discovery Data Mining, pp. 106-115. [Online]. Available: http://doi.acm.org/10.1145/1150402.1150418.
-
(2006)
Proc. 12th ACM SIGKDD Int. Conf. Knowl. Discovery Data Mining
, pp. 106-115
-
-
Chen, J.1
Hsu, W.2
Lee, M.L.3
Ng, S.-K.4
-
10
-
-
33646153295
-
Fanmod: A tool for fast network motif detection
-
S. Wernicke and F. Rasche, "Fanmod: A tool for fast network motif detection," Bioinformatics, vol. 22, no. 9, pp. 1152-1153, 2006.
-
(2006)
Bioinformatics
, vol.22
, Issue.9
, pp. 1152-1153
-
-
Wernicke, S.1
Rasche, F.2
-
11
-
-
34547469442
-
Network motif discovery using subgraph enumeration and symmetry-breaking
-
[Online]. Available
-
J. A. Grochow and M. Kellis. (2007). "Network motif discovery using subgraph enumeration and symmetry-breaking," in Proc. 11th Annu. Int. Conf. Res. Comput. Molecular Biol., pp. 92-106. [Online]. Available: http://dl.acm.org/citation.cfm?id=1758222.1758229.
-
(2007)
Proc. 11th Annu. Int. Conf. Res. Comput. Molecular Biol.
, pp. 92-106
-
-
Grochow, J.A.1
Kellis, M.2
-
12
-
-
76749118079
-
MODA: An efficient algorithm for network motif discovery in biological networks
-
S. Omidi, F. Schreiber, and A. Masoudi-Nejad, "MODA: An efficient algorithm for network motif discovery in biological networks," Genes Genetics Syst., vol. 84, pp. 385-395, 2009.
-
(2009)
Genes Genetics Syst.
, vol.84
, pp. 385-395
-
-
Omidi, S.1
Schreiber, F.2
Masoudi-Nejad, A.3
-
13
-
-
70449631149
-
Kavosh: A new algorithm for finding network motifs
-
Z. Kashani, H. Ahrabian, E. Elahi, A. Nowzari-Dalini, E. Ansari, S. Asadi, S. Mohammadi, F. Schreiber, and A. Masoudi-Nejad, "Kavosh: A new algorithm for finding network motifs," BMC Bioinformat., vol. 10, no. 1, p. 318, 2009.
-
(2009)
BMC Bioinformat.
, vol.10
, Issue.1
, pp. 318
-
-
Kashani, Z.1
Ahrabian, H.2
Elahi, E.3
Nowzari-Dalini, A.4
Ansari, E.5
Asadi, S.6
Mohammadi, S.7
Schreiber, F.8
Masoudi-Nejad, A.9
-
14
-
-
24144495559
-
Mavisto: A tool for the exploration of network motifs
-
F. Schreiber and H. Schwöbbermeyer, "Mavisto: A tool for the exploration of network motifs," Bioinformatics, vol. 21, no. 17, pp. 3572-3574, 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.17
, pp. 3572-3574
-
-
Schreiber, F.1
Schwöbbermeyer, H.2
-
15
-
-
44349107818
-
A review on models and algorithms for motif discovery in protein-protein interaction networks
-
G. Ciriello and C. Guerra, "A review on models and algorithms for motif discovery in protein-protein interaction networks," Briefings Functional Genomics Proteomics, vol. 7, no. 2, pp. 147-156, 2008.
-
(2008)
Briefings Functional Genomics Proteomics
, vol.7
, Issue.2
, pp. 147-156
-
-
Ciriello, G.1
Guerra, C.2
-
16
-
-
77949856178
-
Strategies for network motifs discovery
-
[Online]. Available
-
P. Ribeiro, F. Silva, and M. Kaiser. (2009). Strategies for network motifs discovery. in Proc. 5th IEEE Int. Conf. E-Sci., pp. 80-87. [Online]. Available: http://dx.doi.org/10.1109/e-Science.2009.20
-
(2009)
Proc. 5th IEEE Int. Conf. E-Sci.
, pp. 80-87
-
-
Ribeiro, P.1
Silva, F.2
Kaiser, M.3
-
17
-
-
84863253706
-
Biological network motif detection: Principles and practice
-
E. Wong, B. Baur, S. Quader, and C.-H. Huang, "Biological network motif detection: Principles and practice," Brief Bioinformat., vol. 13, pp. 202-215, 2011.
-
(2011)
Brief Bioinformat.
, vol.13
, pp. 202-215
-
-
Wong, E.1
Baur, B.2
Quader, S.3
Huang, C.-H.4
-
20
-
-
84908014287
-
acc-Motif Detection Tool
-
abs/1203.3415, no. version 2, May
-
L. A. A. Meira, V. R. Máximo, Á. L. Fazenda, and A. F. da Conceic¸ão, "acc-Motif Detection Tool," CoRR, vol. abs/1203.3415, no. version 2, May 2012.
-
(2012)
CoRR
-
-
Meira, L.A.A.1
Máximo, V.R.2
Fazenda, Á.L.3
Da Conceic¸ão, A.F.4
-
21
-
-
84871286847
-
Netmode: Network motif detection without nauty
-
X. Li, D.S. Stones, H. Wang, H. Deng, X. Liu, and G. Wang, "Netmode: Network motif detection without nauty," PloS One, vol. 7, no. 12, p. e50093, 2012.
-
(2012)
PloS One
, vol.7
, Issue.12
, pp. e50093
-
-
Li, X.1
Stones, D.S.2
Wang, H.3
Deng, H.4
Liu, X.5
Wang, G.6
-
22
-
-
84857913562
-
Arboricity, h-index, and dynamic algorithms
-
Available
-
M. C. Lin, F. J. Soulignac, and J. L. Szwarcfiter, (2012). Arboricity, h-index, and dynamic algorithms. Theoretical Comput. Sci. [Online]. 426-427, pp. 75-90. Available: http://www.sciencedirect.com/science/article/pii/S0304397511009662
-
(2012)
Theoretical Comput. Sci. [Online]
, vol.426-427
, pp. 75-90
-
-
Lin, M.C.1
Soulignac, F.J.2
Szwarcfiter, J.L.3
-
23
-
-
12344273375
-
Modeling interactome: Scale-free or geometric?
-
N. Pržulj, D. G. Corneil, and I. Jurisica, "Modeling interactome: Scale-free or geometric?" Bioinformatics, vol. 20, no. 18, pp. 3508-3515, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.18
, pp. 3508-3515
-
-
Pržulj, N.1
Corneil, D.G.2
Jurisica, I.3
-
24
-
-
84907986908
-
Uncovering biological network function via graphlet degree signatures
-
Jan.. arXiv, Available
-
T. Milenkovic and N. Przulj. (2008, Jan.). "Uncovering biological network function via graphlet degree signatures.," arXiv, q-bio. MN. [Online]. Available: http://arxiv.org/abs/0802.0556v1
-
(2008)
Q-bio. MN. [Online]
-
-
Milenkovic, T.1
Przulj, N.2
-
25
-
-
84874098490
-
A new approach to count pattern motifs using combinatorial techniches
-
L. A. A. Meira, V. R. Máximo, Álvaro L. Fazenda, and A. F. da Conceic¸ão, "A new approach to count pattern motifs using combinatorial techniches," in Proc. 8th Int. Conf. Signal Image Tech. - Workshop Complex Netw., Nov. 2012, pp. 744-753.
-
Proc. 8th Int. Conf. Signal Image Tech. - Workshop Complex Netw., Nov. 2012
, pp. 744-753
-
-
Meira, L.A.A.1
Máximo, V.R.2
Fazenda, Á.L.3
Da Conceic¸ão, A.F.4
-
26
-
-
33646153295
-
Fanmod: A tool for fast network motif detection
-
S. Wernicke and F. Rasche., "Fanmod: A tool for fast network motif detection," Bioinformatics, vol. 22, pp. 1152-1153, 2006.
-
(2006)
Bioinformatics
, vol.22
, pp. 1152-1153
-
-
Wernicke, S.1
Rasche, F.2
-
27
-
-
84907973669
-
Weakly connected digraph
-
Jun.. [Online]. Available
-
E. W. Weisstein, "Weakly connected digraph," From MathWorld-AWolfram Web Resource. (2014, Jun.). [Online]. Available: http://mathworld.wolfram.com/WeaklyConnectedDigraph.html
-
(2014)
From MathWorld-AWolfram Web Resource
-
-
Weisstein, E.W.1
-
28
-
-
0022011993
-
Arboricity and subgraph listing algorithms
-
Feb. Available
-
N. Chiba and T. Nishizeki, (1985, Feb). Arboricity and subgraph listing algorithms. SIAM J. Comput. [Online]. 14(1), pp. 210-223. Available: http://dx.doi.org/10.1137/0214017
-
(1985)
SIAM J. Comput. [Online]
, vol.14
, Issue.1
, pp. 210-223
-
-
Chiba, N.1
Nishizeki, T.2
-
30
-
-
54949104981
-
-
[Online]. Available
-
V. Batagelj and A. Mrvar, Pajek data sets. (2005) [Online]. Available: http://vlado.fmf.uni-lj.si/pub/networks/data/
-
(2005)
Pajek Data Sets
-
-
Batagelj, V.1
Mrvar, A.2
|