-
1
-
-
84863799142
-
Tetracyclineregulated expression implemented through transcriptional activation combined with proximal and distal repression
-
PMID:23651153
-
Peacock RW, Sullivan KA, Wang CL. Tetracyclineregulated expression implemented through transcriptional activation combined with proximal and distal repression. ACS Synth Biol 2012; 1:156-62; PMID:23651153; http://dx.doi.org/10.1021/sb200029a
-
(2012)
ACS Synth Biol
, vol.1
, pp. 156-162
-
-
Peacock, R.W.1
Sullivan, K.A.2
Wang, C.L.3
-
2
-
-
83055184071
-
Modulating ectopic gene expression levels by using retroviral vectors equipped with synthetic promoters
-
PMID:23205156
-
Ferreira JP, Peacock RW, Lawhorn IE, Wang CL. Modulating ectopic gene expression levels by using retroviral vectors equipped with synthetic promoters. Syst Synth Biol 2011; 5:131-8; PMID:23205156; http://dx.doi.org/10.1007/s11693-011-9089-0
-
(2011)
Syst Synth Biol
, vol.5
, pp. 131-138
-
-
Ferreira, J.P.1
Peacock, R.W.2
Lawhorn, I.E.3
Wang, C.L.4
-
3
-
-
84855222205
-
Quantitative assessment of Ras over-expression via shotgun deployment of vectors utilizing synthetic promoters
-
PMID:22108821
-
Ferreira JP, Lawhorn IE, Peacock RW, Wang CL. Quantitative assessment of Ras over-expression via shotgun deployment of vectors utilizing synthetic promoters. Integr Biol (Camb) 2012; 4:108-14; PMID:22108821; http://dx.doi.org/10.1039/c1ib00082a
-
(2012)
Integr Biol (Camb)
, vol.4
, pp. 108-114
-
-
Ferreira, J.P.1
Lawhorn, I.E.2
Peacock, R.W.3
Wang, C.L.4
-
4
-
-
66549108297
-
Structure-function insights into prokaryotic and eukaryotic translation initiation
-
PMID:19493673
-
Myasnikov AG, Simonetti A, Marzi S, Klaholz BP. Structure-function insights into prokaryotic and eukaryotic translation initiation. Curr Opin Struct Biol 2009; 19:300-9; PMID:19493673; http://dx.doi.org/10.1016/j.sbi.2009.04.010
-
(2009)
Curr Opin Struct Biol
, vol.19
, pp. 300-309
-
-
Myasnikov, A.G.1
Simonetti, A.2
Marzi, S.3
Klaholz, B.P.4
-
5
-
-
80052742721
-
Molecular mechanism of scanning and start codon selection in eukaryotes
-
PMID:21885680
-
Hinnebusch AG. Molecular mechanism of scanning and start codon selection in eukaryotes. Microbiol Mol Biol Rev 2011; 75:434-67; PMID:21885680; http://dx.doi.org/10.1128/MMBR.00008-11
-
(2011)
Microbiol Mol Biol Rev
, vol.75
, pp. 434-467
-
-
Hinnebusch, A.G.1
-
6
-
-
84879984918
-
Tuning gene expression with synthetic upstream open reading frames
-
PMID:23798422
-
Ferreira JP, Overton KW, Wang CL. Tuning gene expression with synthetic upstream open reading frames. Proc Natl Acad Sci U S A 2013; 110:11284-9; PMID:23798422; http://dx.doi.org/10.1073/pnas.1305590110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 11284-11289
-
-
Ferreira, J.P.1
Overton, K.W.2
Wang, C.L.3
-
7
-
-
0022552131
-
Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes
-
PMID:3943125
-
Kozak M. Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 1986; 44:283-92; PMID:3943125; http://dx.doi.org/10.1016/0092-8674(86)90762-2
-
(1986)
Cell
, vol.44
, pp. 283-292
-
-
Kozak, M.1
-
8
-
-
0023660877
-
At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells
-
PMID:3681984
-
Kozak M. At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells. J Mol Biol 1987; 196:947-50; PMID:3681984; http://dx.doi.org/10.1016/0022-2836(87)90418-9
-
(1987)
J Mol Biol
, vol.196
, pp. 947-950
-
-
Kozak, M.1
-
9
-
-
0031010944
-
Recognition of AUG and alternative initiator codons is augmented by G in position +4 but is not generally affected by the nucleotides in positions +5 and +6
-
PMID:9171361
-
Kozak M. Recognition of AUG and alternative initiator codons is augmented by G in position +4 but is not generally affected by the nucleotides in positions +5 and +6. EMBO J 1997; 16:2482-92; PMID:9171361; http://dx.doi.org/10.1093/emboj/16.9.2482
-
(1997)
EMBO J
, vol.16
, pp. 2482-2492
-
-
Kozak, M.1
-
10
-
-
0023665902
-
An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs
-
PMID:3313277
-
Kozak M. An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 1987; 15:8125-48; PMID:3313277; http://dx.doi.org/10.1093/nar/15.20.8125
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 8125-8148
-
-
Kozak, M.1
-
11
-
-
0036021444
-
Emerging links between initiation of translation and human diseases
-
PMID:12226704
-
Kozak M. Emerging links between initiation of translation and human diseases. Mamm Genome 2002; 13:401-10; PMID:12226704; http://dx.doi.org/10.1007/s00335-002-4002-5
-
(2002)
Mamm Genome
, vol.13
, pp. 401-410
-
-
Kozak, M.1
-
12
-
-
45549088326
-
The transcriptional landscape of the yeast genome defined by RNA sequencing
-
PMID:18451266
-
Nagalakshmi U, Wang Z, Waern K, Shou C, Raha D, Gerstein M, Snyder M. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 2008; 320:1344-9; PMID:18451266; http://dx.doi.org/10.1126/science.1158441
-
(2008)
Science
, vol.320
, pp. 1344-1349
-
-
Nagalakshmi, U.1
Wang, Z.2
Waern, K.3
Shou, C.4
Raha, D.5
Gerstein, M.6
Snyder, M.7
-
13
-
-
61649096857
-
Upstream sequence elements direct posttranscriptional regulation of gene expression under stress conditions in yeast
-
PMID:19128476
-
Lawless C, Pearson RD, Selley JN, Smirnova JB, Grant CM, Ashe MP, Pavitt GD, Hubbard SJ. Upstream sequence elements direct posttranscriptional regulation of gene expression under stress conditions in yeast. BMC Genomics 2009; 10:7; PMID:19128476; http://dx.doi.org/10.1186/1471-2164-10-7
-
(2009)
BMC Genomics
, vol.10
, pp. 7
-
-
Lawless, C.1
Pearson, R.D.2
Selley, J.N.3
Smirnova, J.B.4
Grant, C.M.5
Ashe, M.P.6
Pavitt, G.D.7
Hubbard, S.J.8
-
14
-
-
0036651439
-
Context organization of mRNA 5′-untranslated regions of higher plants
-
PMID:12173469
-
Kochetov AV, Syrnik OA, Rogozin IB, Glazko GV, Komarova ML, Shumnyi VK. [Context organization of mRNA 5′-untranslated regions of higher plants]. Mol Biol (Mosk) 2002; 36:649-56; PMID:12173469
-
(2002)
Mol Biol (Mosk)
, vol.36
, pp. 649-656
-
-
Kochetov, A.V.1
Syrnik, O.A.2
Rogozin, I.B.3
Glazko, G.V.4
Komarova, M.L.5
Shumnyi, V.K.6
-
15
-
-
66149118241
-
Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans
-
PMID:19372376
-
Calvo SE, Pagliarini DJ, Mootha VK. Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans. Proc Natl Acad Sci U S A 2009; 106:7507-12; PMID:19372376; http://dx.doi.org/10.1073/pnas.0810916106
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 7507-7512
-
-
Calvo, S.E.1
Pagliarini, D.J.2
Mootha, V.K.3
-
16
-
-
0023425901
-
Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes
-
PMID:3683388
-
Kozak M. Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes. Mol Cell Biol 1987; 7:3438-45; PMID:3683388
-
(1987)
Mol Cell Biol
, vol.7
, pp. 3438-3445
-
-
Kozak, M.1
-
17
-
-
77954356006
-
Eukaryotic protein synthesis: Still a mystery
-
PMID:20444697
-
Merrick WC. Eukaryotic protein synthesis: still a mystery. J Biol Chem 2010; 285:21197-201; PMID:20444697; http://dx.doi.org/10.1074/jbc.R110.111476
-
(2010)
J Biol Chem
, vol.285
, pp. 21197-21201
-
-
Merrick, W.C.1
-
18
-
-
84855886702
-
Termination and post-termination events in eukaryotic translation
-
PMID:22243581
-
Jackson RJ, Hellen CU, Pestova TV. Termination and post-termination events in eukaryotic translation. Adv Protein Chem Struct Biol 2012; 86:45-93; PMID:22243581; http://dx.doi.org/10.1016/B978-0-12-386497-0.00002-5
-
(2012)
Adv Protein Chem Struct Biol
, vol.86
, pp. 45-93
-
-
Jackson, R.J.1
Hellen, C.U.2
Pestova, T.V.3
-
19
-
-
84880512422
-
Reinitiation and other unconventional posttermination events during eukaryotic translation
-
PMID:23810859
-
Skabkin MA, Skabkina OV, Hellen CU, Pestova TV. Reinitiation and other unconventional posttermination events during eukaryotic translation. Mol Cell 2013; 51:249-64; PMID:23810859; http://dx.doi.org/10.1016/j.molcel.2013.05.026
-
(2013)
Mol Cell
, vol.51
, pp. 249-264
-
-
Skabkin, M.A.1
Skabkina, O.V.2
Hellen, C.U.3
Pestova, T.V.4
-
20
-
-
84889686501
-
Optimization of oncogene expression through intra-population competition
-
PMID:23843261
-
Ferreira JP, Wang CL. Optimization of oncogene expression through intra-population competition. Biotechnol J 2013; 8:1476-84; PMID:23843261; http://dx.doi.org/10.1002/biot.201300037
-
(2013)
Biotechnol J
, vol.8
, pp. 1476-1484
-
-
Ferreira, J.P.1
Wang, C.L.2
-
21
-
-
0028607170
-
Determinants of translational fidelity and efficiency in vertebrate mRNAs
-
PMID:7880897
-
Kozak M. Determinants of translational fidelity and efficiency in vertebrate mRNAs. Biochimie 1994; 76:815-21; PMID:7880897; http://dx.doi.org/10.1016/0300-9084(94)90182-1
-
(1994)
Biochimie
, vol.76
, pp. 815-821
-
-
Kozak, M.1
-
22
-
-
41749089797
-
Reprogramming mRNA translation during stress
-
PMID:18356035
-
Yamasaki S, Anderson P. Reprogramming mRNA translation during stress. Curr Opin Cell Biol 2008; 20:222-6; PMID:18356035; http://dx.doi.org/10.1016/j.ceb.2008.01.013
-
(2008)
Curr Opin Cell Biol
, vol.20
, pp. 222-226
-
-
Yamasaki, S.1
Erson, P.2
-
23
-
-
0033230435
-
Regulation of translation initiation following stress
-
PMID:10557103
-
Sheikh MS, Fornace AJ Jr. Regulation of translation initiation following stress. Oncogene 1999; 18:6121-8; PMID:10557103; http://dx.doi.org/10.1038/sj.onc.1203131
-
(1999)
Oncogene
, vol.18
, pp. 6121-6128
-
-
Sheikh, M.S.1
Fornace, A.J.2
-
24
-
-
84856111924
-
The unfolded protein response: Controlling cell fate decisions under ER stress and beyond
-
PMID:22251901
-
Hetz C. The unfolded protein response: controlling cell fate decisions under ER stress and beyond. Nat Rev Mol Cell Biol 2012; 13:89-102; PMID:22251901
-
(2012)
Nat Rev Mol Cell Biol
, vol.13
, pp. 89-102
-
-
Hetz, C.1
-
25
-
-
27144510561
-
Translational regulation of GCN4 and the general amino acid control of yeast
-
PMID:16153175
-
Hinnebusch AG. Translational regulation of GCN4 and the general amino acid control of yeast. Annu Rev Microbiol 2005; 59:407-50; PMID:16153175; http://dx.doi.org/10.1146/annurev.micro.59.031805.133833
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 407-450
-
-
Hinnebusch, A.G.1
-
26
-
-
0023791518
-
Evidence for regulation of reinitiation in translational control of GCN4 mRNA
-
PMID:3050993
-
Hinnebusch AG, Jackson BM, Mueller PP. Evidence for regulation of reinitiation in translational control of GCN4 mRNA. Proc Natl Acad Sci U S A 1988; 85:7279-83; PMID:3050993; http://dx.doi.org/10.1073/pnas.85.19.7279
-
(1988)
Proc Natl Acad Sci U S A
, vol.85
, pp. 7279-7283
-
-
Hinnebusch, A.G.1
Jackson, B.M.2
Mueller, P.P.3
-
27
-
-
0022512237
-
Multiple upstream AUG codons mediate translational control of GCN 4
-
PMID:3516411
-
Mueller PP, Hinnebusch AG. Multiple upstream AUG codons mediate translational control of GCN 4. Cell 1986; 45:201-7; PMID:3516411; http://dx.doi.org/10.1016/0092-8674(86)90384-3
-
(1986)
Cell
, vol.45
, pp. 201-207
-
-
Mueller, P.P.1
Hinnebusch, A.G.2
-
28
-
-
0033634654
-
Regulated translation initiation controls stress-induced gene expression in mammalian cells
-
PMID:11106749
-
Harding HP, Novoa I, Zhang Y, Zeng H, Wek R, Schapira M, Ron D. Regulated translation initiation controls stress-induced gene expression in mammalian cells. Mol Cell 2000; 6:1099-108; PMID:11106749; http://dx.doi.org/10.1016/S1097-2765(00)00108-8
-
(2000)
Mol Cell
, vol.6
, pp. 1099-1108
-
-
Harding, H.P.1
Novoa, I.2
Zhang, Y.3
Zeng, H.4
Wek, R.5
Schapira, M.6
Ron, D.7
-
29
-
-
5444264022
-
Translation reinitiation at alternative open reading frames regulates gene expression in an integrated stress response
-
PMID:15479734
-
Lu PD, Harding HP, Ron D. Translation reinitiation at alternative open reading frames regulates gene expression in an integrated stress response. J Cell Biol 2004; 167:27-33; PMID:15479734; http://dx.doi.org/10.1083/jcb.200408003
-
(2004)
J Cell Biol
, vol.167
, pp. 27-33
-
-
Lu, P.D.1
Harding, H.P.2
Ron, D.3
-
30
-
-
3843117589
-
Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells
-
PMID:15277680
-
Vattem KM, Wek RC. Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells. Proc Natl Acad Sci U S A 2004; 101:11269-74; PMID:15277680; http://dx.doi.org/10.1073/pnas.0400541101
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 11269-11274
-
-
Vattem, K.M.1
Wek, R.C.2
-
31
-
-
0026774149
-
Translational activation of the non-AUG-initiated c-myc 1 protein at high cell densities due to methionine deprivation
-
PMID:1628829
-
Hann SR, Sloan-Brown K, Spotts GD. Translational activation of the non-AUG-initiated c-myc 1 protein at high cell densities due to methionine deprivation. Genes Dev 1992; 6:1229-40; PMID:1628829; http://dx.doi.org/10.1101/gad.6.7.1229
-
(1992)
Genes Dev
, vol.6
, pp. 1229-1240
-
-
Hann, S.R.1
Sloan-Brown, K.2
Spotts, G.D.3
-
32
-
-
0028012044
-
Effect of sequence context at stop codons on efficiency of reinitiation in GCN4 translational control
-
PMID:8264629
-
Grant CM, Hinnebusch AG. Effect of sequence context at stop codons on efficiency of reinitiation in GCN4 translational control. Mol Cell Biol 1994; 14:606-18; PMID:8264629
-
(1994)
Mol Cell Biol
, vol.14
, pp. 606-618
-
-
Grant, C.M.1
Hinnebusch, A.G.2
-
33
-
-
0028327578
-
Requirements for intercistronic distance and level of eukaryotic initiation factor 2 activity in reinitiation on GCN4 mRNA vary with the downstream cistron
-
PMID:8139562
-
Grant CM, Miller PF, Hinnebusch AG. Requirements for intercistronic distance and level of eukaryotic initiation factor 2 activity in reinitiation on GCN4 mRNA vary with the downstream cistron. Mol Cell Biol 1994; 14:2616-28; PMID:8139562; http://dx.doi.org/10.1128/MCB.14.4.2616
-
(1994)
Mol Cell Biol
, vol.14
, pp. 2616-2628
-
-
Grant, C.M.1
Miller, P.F.2
Hinnebusch, A.G.3
-
34
-
-
0025107694
-
Downstream secondary structure facilitates recognition of initiator codons by eukaryotic ribosomes
-
PMID:2236042
-
Kozak M. Downstream secondary structure facilitates recognition of initiator codons by eukaryotic ribosomes. Proc Natl Acad Sci U S A 1990; 87:8301-5; PMID:2236042; http://dx.doi.org/10.1073/pnas.87.21.8301
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 8301-8305
-
-
Kozak, M.1
|