-
1
-
-
79952650662
-
Actin-related proteins localized in the nucleus: From discovery to novel roles in nuclear organization
-
Oma Y, Harata M (2011) Actin-related proteins localized in the nucleus: from discovery to novel roles in nuclear organization. Nucleus 2: 38-46.
-
(2011)
Nucleus
, vol.2
, pp. 38-46
-
-
Oma, Y.1
Harata, M.2
-
2
-
-
77954766868
-
Actin-related proteins in the nucleus: Life beyond chromatin remodelers
-
Dion V, Shimada K, Gasser SM (2010) Actin-related proteins in the nucleus: life beyond chromatin remodelers. Curr Opin Cell Biol 22: 383-391.
-
(2010)
Curr Opin Cell Biol
, vol.22
, pp. 383-391
-
-
Dion, V.1
Shimada, K.2
Gasser, S.M.3
-
3
-
-
79957899902
-
Arp you ready for actin in the nucleus?
-
Kast DJ, Dominguez R (2011) Arp you ready for actin in the nucleus? EMBO J 30: 2097-2098.
-
(2011)
EMBO J
, vol.30
, pp. 2097-2098
-
-
Kast, D.J.1
Dominguez, R.2
-
4
-
-
0033939466
-
Actin-related proteins (Arps): Conformational switches for chromatin-remodeling machines?
-
Boyer LA, Peterson CL (2000) Actin-related proteins (Arps): conformational switches for chromatin-remodeling machines? Bioessays 22: 666-672.
-
(2000)
Bioessays
, vol.22
, pp. 666-672
-
-
Boyer, L.A.1
Peterson, C.L.2
-
5
-
-
23944525363
-
The nuclear actin-related protein Act3p/Arp4p is involved in the dynamics of chromatin-modulating complexes
-
Sunada R, Gorzer I, Oma Y, Yoshida T, Suka N, et al. (2005) The nuclear actin-related protein Act3p/Arp4p is involved in the dynamics of chromatin-modulating complexes. Yeast 22: 753-768.
-
(2005)
Yeast
, vol.22
, pp. 753-768
-
-
Sunada, R.1
Gorzer, I.2
Oma, Y.3
Yoshida, T.4
Suka, N.5
-
6
-
-
0032784327
-
The nuclear actin-related protein of Saccharomyces cerevisiae, Act3p/Arp4, interacts with core histones
-
Harata M, Oma Y, Mizuno S, Jiang YW, Stillman DJ, et al. (1999) The nuclear actin-related protein of Saccharomyces cerevisiae, Act3p/Arp4, interacts with core histones. Mol Biol Cell 10: 2595-2605.
-
(1999)
Mol Biol Cell
, vol.10
, pp. 2595-2605
-
-
Harata, M.1
Oma, Y.2
Mizuno, S.3
Jiang, Y.W.4
Stillman, D.J.5
-
7
-
-
0042671282
-
Involvement of actin-related proteins in ATP-dependent chromatin remodeling
-
Shen X, Ranallo R, Choi E, Wu C (2003) Involvement of actin-related proteins in ATP-dependent chromatin remodeling. Mol Cell 12: 147-155.
-
(2003)
Mol Cell
, vol.12
, pp. 147-155
-
-
Shen, X.1
Ranallo, R.2
Choi, E.3
Wu, C.4
-
8
-
-
84869118895
-
Heterocomplex Formation by Arp4 and beta-Actin Involved in integrity of the Brg1 chromatin remodeling complex
-
Nishimoto N, Watanabe M, Watanabe S, Sugimoto N, Yugawa T, et al. (2012) Heterocomplex Formation by Arp4 and beta-Actin Involved in Integrity of the Brg1 Chromatin Remodeling Complex. J Cell Sci.
-
(2012)
J Cell Sci.
-
-
Nishimoto, N.1
Watanabe, M.2
Watanabe, S.3
Sugimoto, N.4
Yugawa, T.5
-
9
-
-
84870595949
-
Structure of Actin-related protein 8 and its contribution to nucleosome binding
-
Gerhold CB, Winkler DD, Lakomek K, Seifert FU, Fenn S, et al. (2012) Structure of Actin-related protein 8 and its contribution to nucleosome binding. Nucleic Acids Res 40: 11036-11046.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 11036-11046
-
-
Gerhold, C.B.1
Winkler, D.D.2
Lakomek, K.3
Seifert, F.U.4
Fenn, S.5
-
10
-
-
84871397110
-
Interactions between the nucleosome histone core and Arp8 in the INO80 chromatin remodeling complex
-
Saravanan M, Wuerges J, Bose D, McCormack EA, Cook NJ, et al. (2012) Interactions between the nucleosome histone core and Arp8 in the INO80 chromatin remodeling complex. Proc Natl Acad Sci U S A 109: 20883-20888.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 20883-20888
-
-
Saravanan, M.1
Wuerges, J.2
Bose, D.3
McCormack, E.A.4
Cook, N.J.5
-
11
-
-
84884228389
-
Structure and subunit topology of the INO80 chromatin remodeler and its nucleosome complex
-
Tosi A, Haas C, Herzog F, Gilmozzi A, Berninghausen O, et al. (2013) Structure and subunit topology of the INO80 chromatin remodeler and its nucleosome complex. Cell 154: 1207-1219.
-
(2013)
Cell
, vol.154
, pp. 1207-1219
-
-
Tosi, A.1
Haas, C.2
Herzog, F.3
Gilmozzi, A.4
Berninghausen, O.5
-
12
-
-
34548501274
-
YY1 functions with INO80 to activate transcription
-
Cai Y, Jin J, Yao T, Gottschalk AJ, Swanson SK, et al. (2007) YY1 functions with INO80 to activate transcription. Nat Struct Mol Biol 14: 872-874.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 872-874
-
-
Cai, Y.1
Jin, J.2
Yao, T.3
Gottschalk, A.J.4
Swanson, S.K.5
-
13
-
-
77954161560
-
Chromatin remodeling protein INO80 has a role in regulation of homeotic gene expression in Drosophila
-
Bhatia S, Pawar H, Dasari V, Mishra RK, Chandrashekaran S, et al. (2010) Chromatin remodeling protein INO80 has a role in regulation of homeotic gene expression in Drosophila. Genes Cells 15: 725-735.
-
(2010)
Genes Cells
, vol.15
, pp. 725-735
-
-
Bhatia, S.1
Pawar, H.2
Dasari, V.3
Mishra, R.K.4
Chandrashekaran, S.5
-
14
-
-
10944233962
-
Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair
-
van Attikum H, Fritsch O, Hohn B, Gasser SM (2004) Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair. Cell 119: 777-788.
-
(2004)
Cell
, vol.119
, pp. 777-788
-
-
Van Attikum, H.1
Fritsch, O.2
Hohn, B.3
Gasser, S.M.4
-
15
-
-
83255185774
-
Mammalian Ino80 mediates double-strand break repair through its role in DNA end strand resection
-
Gospodinov A, Vaissiere T, Krastev DB, Legube G, Anachkova B, et al. (2011) Mammalian Ino80 mediates double-strand break repair through its role in DNA end strand resection. Mol Cell Biol 31: 4735-4745.
-
(2011)
Mol Cell Biol
, vol.31
, pp. 4735-4745
-
-
Gospodinov, A.1
Vaissiere, T.2
Krastev, D.B.3
Legube, G.4
Anachkova, B.5
-
16
-
-
42049094866
-
Ino80 chromatin remodeling complex promotes recovery of stalled replication forks
-
Shimada K, Oma Y, Schleker T, Kugou K, Ohta K, et al. (2008) Ino80 chromatin remodeling complex promotes recovery of stalled replication forks. Curr Biol 18: 566-575.
-
(2008)
Curr Biol
, vol.18
, pp. 566-575
-
-
Shimada, K.1
Oma, Y.2
Schleker, T.3
Kugou, K.4
Ohta, K.5
-
17
-
-
78649447860
-
The mammalian INO80 complex is recruited to DNA damage sites in an ARP8 dependent manner
-
Kashiwaba S, Kitahashi K, Watanabe T, Onoda F, Ohtsu M, et al. (2010) The mammalian INO80 complex is recruited to DNA damage sites in an ARP8 dependent manner. Biochem Biophys Res Commun 402: 619-625.
-
(2010)
Biochem Biophys Res Commun
, vol.402
, pp. 619-625
-
-
Kashiwaba, S.1
Kitahashi, K.2
Watanabe, T.3
Onoda, F.4
Ohtsu, M.5
-
18
-
-
28644433381
-
Sequence and comparative genomic analysis of actin-related proteins
-
Muller J, Oma Y, Vallar L, Friederich E, Poch O, et al. (2005) Sequence and comparative genomic analysis of actin-related proteins. Mol Biol Cell 16: 5736-5748.
-
(2005)
Mol Biol Cell
, vol.16
, pp. 5736-5748
-
-
Muller, J.1
Oma, Y.2
Vallar, L.3
Friederich, E.4
Poch, O.5
-
19
-
-
38649127567
-
Identification of DNA-binding proteins using support vector machines and evolutionary profiles
-
Kumar M, Gromiha MM, Raghava GP (2007) Identification of DNA-binding proteins using support vector machines and evolutionary profiles. BMC Bioinformatics 8: 463.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 463
-
-
Kumar, M.1
Gromiha, M.M.2
Raghava, G.P.3
-
20
-
-
34648834736
-
Distinct roles for SWR1 and INO80 chromatin remodeling complexes at chromosomal double-strand breaks
-
van Attikum H, Fritsch O, Gasser SM (2007) Distinct roles for SWR1 and INO80 chromatin remodeling complexes at chromosomal double-strand breaks. EMBO J 26: 4113-4125.
-
(2007)
EMBO J
, vol.26
, pp. 4113-4125
-
-
Van Attikum, H.1
Fritsch, O.2
Gasser, S.M.3
-
21
-
-
84862995618
-
The RSC and INO80 chromatin-remodeling complexes in DNA double-strand break repair
-
Chambers AL, Downs JA (2012) The RSC and INO80 chromatin-remodeling complexes in DNA double-strand break repair. Prog Mol Biol Transl Sci 110: 229-261.
-
(2012)
Prog Mol Biol Transl Sci
, vol.110
, pp. 229-261
-
-
Chambers, A.L.1
Downs, J.A.2
-
22
-
-
64249165835
-
Generation of tetracycline-inducible conditional gene knockout cells in a human Nalm-6 cell line
-
Ono T, Nishijima H, Adachi N, Iiizumi S, Morohoshi A, et al. (2009) Generation of tetracycline-inducible conditional gene knockout cells in a human Nalm-6 cell line. J Biotechnol 141: 1-7.
-
(2009)
J Biotechnol
, vol.141
, pp. 1-7
-
-
Ono, T.1
Nishijima, H.2
Adachi, N.3
Iiizumi, S.4
Morohoshi, A.5
-
23
-
-
0042632901
-
Pathways of DNA double-strand break repair during the mammalian cell cycle
-
Rothkamm K, Kruger I, Thompson LH, Lobrich M (2003) Pathways of DNA double-strand break repair during the mammalian cell cycle. Mol Cell Biol 23: 5706-5715.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 5706-5715
-
-
Rothkamm, K.1
Kruger, I.2
Thompson, L.H.3
Lobrich, M.4
-
24
-
-
23344444636
-
Spontaneous homologous recombination is induced by collapsed replication forks that are caused by endogenous DNA single-strand breaks
-
Saleh-Gohari N, Bryant HE, Schultz N, Parker KM, Cassel TN, et al. (2005) Spontaneous homologous recombination is induced by collapsed replication forks that are caused by endogenous DNA single-strand breaks. Mol Cell Biol 25: 7158-7169.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 7158-7169
-
-
Saleh-Gohari, N.1
Bryant, H.E.2
Schultz, N.3
Parker, K.M.4
Cassel, T.N.5
-
25
-
-
23344453175
-
Differential and collaborative actions of Rad51 paralog proteins in cellular response to DNA damage
-
Yonetani Y, Hochegger H, Sonoda E, Shinya S, Yoshikawa H, et al. (2005) Differential and collaborative actions of Rad51 paralog proteins in cellular response to DNA damage. Nucleic Acids Res 33: 4544-4552.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4544-4552
-
-
Yonetani, Y.1
Hochegger, H.2
Sonoda, E.3
Shinya, S.4
Yoshikawa, H.5
-
26
-
-
0035853295
-
DNA double-strand breaks associated with replication forks are predominantly repaired by homologous recombination involving an exchange mechanism in mammalian cells
-
Arnaudeau C, Lundin C, Helleday T (2001) DNA double-strand breaks associated with replication forks are predominantly repaired by homologous recombination involving an exchange mechanism in mammalian cells. J Mol Biol 307: 1235-1245.
-
(2001)
J Mol Biol
, vol.307
, pp. 1235-1245
-
-
Arnaudeau, C.1
Lundin, C.2
Helleday, T.3
-
27
-
-
84876166087
-
Evidence for monomeric actin function in INO80 chromatin remodeling
-
Kapoor P, Chen M, Winkler DD, Luger K, Shen X (2013) Evidence for monomeric actin function in INO80 chromatin remodeling. Nat Struct Mol Biol 20: 426-432.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 426-432
-
-
Kapoor, P.1
Chen, M.2
Winkler, D.D.3
Luger, K.4
Shen, X.5
-
28
-
-
84885373715
-
DNA repair choice defines a common pathway for recruitment of chromatin regulators
-
Bennett G, Papamichos-Chronakis M, Peterson CL (2013) DNA repair choice defines a common pathway for recruitment of chromatin regulators. Nat Commun 4: 2084.
-
(2013)
Nat Commun
, vol.4
, pp. 2084
-
-
Bennett, G.1
Papamichos-Chronakis, M.2
Peterson, C.L.3
-
29
-
-
79957907752
-
Structural biochemistry of nuclear actin-related proteins 4 and 8 reveals their interaction with actin
-
Fenn S, Breitsprecher D, Gerhold CB, Witte G, Faix J, et al. (2011) Structural biochemistry of nuclear actin-related proteins 4 and 8 reveals their interaction with actin. EMBO J 30: 2153-2166.
-
(2011)
EMBO J
, vol.30
, pp. 2153-2166
-
-
Fenn, S.1
Breitsprecher, D.2
Gerhold, C.B.3
Witte, G.4
Faix, J.5
-
30
-
-
34247619703
-
Insights into the influence of nucleotides on actin family proteins from seven structures of Arp2/3 complex
-
Nolen BJ, Pollard TD (2007) Insights into the influence of nucleotides on actin family proteins from seven structures of Arp2/3 complex. Mol Cell 26: 449-457.
-
(2007)
Mol Cell
, vol.26
, pp. 449-457
-
-
Nolen, B.J.1
Pollard, T.D.2
-
31
-
-
58749091822
-
The nature of the globular- to fibrous-actin transition
-
Oda T, Iwasa M, Aihara T, Maeda Y, Narita A (2009) The nature of the globular- to fibrous-actin transition. Nature 457: 441-445.
-
(2009)
Nature
, vol.457
, pp. 441-445
-
-
Oda, T.1
Iwasa, M.2
Aihara, T.3
Maeda, Y.4
Narita, A.5
-
32
-
-
0034695421
-
Polymerization and structure of nucleotide-free actin filaments
-
De La Cruz EM, Mandinova A, Steinmetz MO, Stoffler D, Aebi U, et al. (2000) Polymerization and structure of nucleotide-free actin filaments. J Mol Biol 295: 517-526.
-
(2000)
J Mol Biol
, vol.295
, pp. 517-526
-
-
De La Cruz, E.M.1
Mandinova, A.2
Steinmetz, M.O.3
Stoffler, D.4
Aebi, U.5
-
33
-
-
33847388360
-
The INO80 complex is required for damage-induced recombination
-
Kawashima S, Ogiwara H, Tada S, Harata M, Wintersberger U, et al. (2007) The INO80 complex is required for damage-induced recombination. Biochem Biophys Res Commun 355: 835-841.
-
(2007)
Biochem Biophys Res Commun
, vol.355
, pp. 835-841
-
-
Kawashima, S.1
Ogiwara, H.2
Tada, S.3
Harata, M.4
Wintersberger, U.5
-
34
-
-
38949145356
-
The actin-related protein hArp8 accumulates on the mitotic chromosomes and functions in chromosome alignment
-
Aoyama N, Oka A, Kitayama K, Kurumizaka H, Harata M (2008) The actin-related protein hArp8 accumulates on the mitotic chromosomes and functions in chromosome alignment. Exp Cell Res 314: 859-868.
-
(2008)
Exp Cell Res
, vol.314
, pp. 859-868
-
-
Aoyama, N.1
Oka, A.2
Kitayama, K.3
Kurumizaka, H.4
Harata, M.5
-
35
-
-
0021997074
-
Poly(ADP-ribose) in the cellular response to DNA damage
-
Berger NA (1985) Poly(ADP-ribose) in the cellular response to DNA damage. Radiat Res 101: 4-15.
-
(1985)
Radiat Res
, vol.101
, pp. 4-15
-
-
Berger, N.A.1
-
36
-
-
84859224378
-
Genome-wide association and functional follow-up reveals new loci for kidney function
-
Pattaro C, Kottgen A, Teumer A, Garnaas M, Boger CA, et al. (2012) Genome-wide association and functional follow-up reveals new loci for kidney function. PLoS Genet 8: e1002584.
-
(2012)
PLoS Genet
, vol.8
, pp. e1002584
-
-
Pattaro, C.1
Kottgen, A.2
Teumer, A.3
Garnaas, M.4
Boger, C.A.5
-
37
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
38
-
-
77954274685
-
Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2
-
MacKay C, Declais AC, Lundin C, Agostinho A, Deans AJ, et al. (2010) Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2. Cell 142: 65-76.
-
(2010)
Cell
, vol.142
, pp. 65-76
-
-
MacKay, C.1
Declais, A.C.2
Lundin, C.3
Agostinho, A.4
Deans, A.J.5
-
39
-
-
77952480111
-
Improved applications of the tetracycline-regulated gene depletion system
-
Nishijima H, Yasunari T, Nakayama T, Adachi N, Shibahara K (2009) Improved applications of the tetracycline-regulated gene depletion system. Biosci Trends 3: 161-167.
-
(2009)
Biosci Trends
, vol.3
, pp. 161-167
-
-
Nishijima, H.1
Yasunari, T.2
Nakayama, T.3
Adachi, N.4
Shibahara, K.5
-
40
-
-
44449177123
-
The organization of histone H3 modifications as revealed by a panel of specific monoclonal antibodies
-
Kimura H, Hayashi-Takanaka Y, Goto Y, Takizawa N, Nozaki N (2008) The organization of histone H3 modifications as revealed by a panel of specific monoclonal antibodies. Cell Struct Funct 33: 61-73.
-
(2008)
Cell Struct Funct
, vol.33
, pp. 61-73
-
-
Kimura, H.1
Hayashi-Takanaka, Y.2
Goto, Y.3
Takizawa, N.4
Nozaki, N.5
|