High-throughput sequencing of RNA isolated by cross-linking and immunoprecipitation (HITS-CLIP) to determine sites of binding of CstF-64 on nascent RNAs

Methods in Molecular Biology

Volumn 1125, Issue , 2014, Pages 187-208

  Grozdanov, Petar N ^a   Macdonald, Clinton C ^a  

^a NONE

Author keywords

CLIP; CstF 64; Immunoprecipitation; Polyadenylation; RNA binding protein; RNA seq; UV cross linking

Indexed keywords

ALKALINE PHOSPHATASE; CLEAVAGE STIMULATION FACTOR; CLEAVAGE STIMULATION FACTOR 64; DEOXYRIBONUCLEASE I; DNA; MESSENGER RNA PRECURSOR; PANCREATIC RIBONUCLEASE; PYROXYLIN; RNA BINDING PROTEIN; RNA DIRECTED DNA POLYMERASE; UNCLASSIFIED DRUG; RNA;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CELL LYSATE; CROSS LINKING; DEPHOSPHORYLATION; GEL ELECTROPHORESIS; GENETIC ASSOCIATION; HIGH THROUGHPUT SEQUENCING; IMMUNOPRECIPITATION; MALE; MOLECULAR WEIGHT; MOUSE; NATIVE POLYACRYLAMIDE GEL ELECTROPHORESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYADENYLATION; PRIORITY JOURNAL; PROTEIN DEPHOSPHORYLATION; PROTEIN EXPRESSION; PROTEIN RNA BINDING; RNA ISOLATION; RNA SEQUENCE; ULTRAVIOLET RADIATION; WESTERN BLOTTING; CHEMISTRY; GENETICS; METABOLISM; METHODOLOGY; PHYSIOLOGY;

ELECTROPHORESIS, POLYACRYLAMIDE GEL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; IMMUNOPRECIPITATION; POLYADENYLATION; RNA; RNA-BINDING PROTEINS;

EID: 84907259326     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-971-0_17     Document Type: Article

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