Application of a target enrichment-based next-generation sequencing protocol for identification and sequence-based prediction of pneumococcal serotypes

BMC Microbiology

Volumn 14, Issue 1, 2014, Pages

  Liyanapathirana, Veranja ^a   Ang, Irene ^a   Tsang, Dominic ^b   Fung, Kitty ^c   Ng, Tak Keung ^d   Zhou, Haokui ^a   Ip, Margaret ^a  

^a CHINESE UNIVERSITY OF HONG KONG   (Hong Kong)

^b QUEEN ELIZABETH HOSPITAL   (Hong Kong)

^c UNITED CHRISTIAN HOSPITAL   (Hong Kong)

^d PRINCESS MARGARET HOSPITAL   (Hong Kong)

Author keywords

Next generation sequencing (NGS); Serotyping; Streptococcus pneumoniae

Indexed keywords

POLYSACCHARIDE; POLYSACCHARIDE VACCINE; PNEUMOCOCCUS VACCINE;

ARTICLE; BACTERIUM IDENTIFICATION; DNA ISOLATION; GENE SEQUENCE; GENOME; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; PREDICTION; PRIMARY CULTURE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEROTYPE; SEROTYPING; STREPTOCOCCUS PNEUMONIAE; AMPLICON; AUTOMATION; BACTERIAL GENE; BACTERIUM COLONY; BACTERIUM ISOLATE; CAPILLARY ELECTROPHORESIS; CLINICAL PROTOCOL; ENRICHMENT BASED NEXT GENERATION SEQUENCING; FEASIBILITY STUDY; HUMAN; MASS SPECTROMETRY; NEXT GENERATION SEQUENCING; VALIDATION PROCESS;

STREPTOCOCCUS PNEUMONIAE;

GENOTYPE; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; SEROTYPING; STREPTOCOCCUS PNEUMONIAE;

EID: 84907048312     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-14-60     Document Type: Article

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