메뉴 건너뛰기




Volumn 30, Issue 17, 2014, Pages 2519-2520

RNASeqExpressionBrowser-a web interface to browse and visualize high-throughput expression data

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; GENE EXPRESSION PROFILING; HIGH THROUGHPUT SEQUENCING; INTERNET; PROCEDURES; SEQUENCE ANALYSIS;

EID: 84907020103     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btu334     Document Type: Article
Times cited : (23)

References (12)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped blast and psi-blast: A new generation of protein database search programs
    • Altschul, S.F. et al. (1997) Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res., 17, 3389-3402.
    • (1997) Nucleic Acids Res , vol.17 , pp. 3389-3402
    • Altschul, S.F.1
  • 2
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • Anders, S. and Huber, W. (2010) Differential expression analysis for sequence count data. Genome Biol., 11, R106.
    • (2010) Genome Biol , vol.11
    • Anders, S.1    Huber, W.2
  • 3
    • 84870260198 scopus 로고    scopus 로고
    • Analysis of the bread wheat genome using whole-genome shotgun sequencing
    • Brenchley, R. et al. (2012) Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 491, 705-710.
    • (2012) Nature , vol.491 , pp. 705-710
    • Brenchley, R.1
  • 4
    • 0346801873 scopus 로고    scopus 로고
    • The gene ontology (go) database and informatics resource
    • Gene Ontology Consortium
    • Gene Ontology Consortium. (2004) The gene ontology (go) database and informatics resource. Nucleic Acids Res., 32 (Suppl. 1), D258-D261.
    • (2004) Nucleic Acids Res , vol.32 SUPPL. 1
  • 5
    • 84864483625 scopus 로고    scopus 로고
    • RobiNA: A user-friendly, integrated software solution for RNA-Seq-based transcriptomics
    • Lohse, M. et al. (2012) RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res., 40, W622-W627.
    • (2012) Nucleic Acids Res , vol.40
    • Lohse, M.1
  • 6
    • 84876548209 scopus 로고    scopus 로고
    • MIPS PlantsDB: A database framework for comparative plant genome research
    • Nussbaumer, T. et al. (2013) MIPS PlantsDB: a database framework for comparative plant genome research. Nucleic Acids Res., 41, D1144-D1151.
    • (2013) Nucleic Acids Res , vol.41
    • Nussbaumer, T.1
  • 7
    • 75249087100 scopus 로고    scopus 로고
    • EdgeR: A bioconductor package for differential expression analysis of digital gene expression data
    • Robinson, M.D. et al. (2010) edgeR: a bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics, 26, 139-140.
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1
  • 8
    • 84870265846 scopus 로고    scopus 로고
    • A physical, genetic and functional sequence assembly of the barley genome
    • The International Barley Sequencing Consortium.
    • The International Barley Sequencing Consortium. (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature, 491, 711-716.
    • (2012) Nature , vol.491 , pp. 711-716
  • 9
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell, C. et al. (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics, 25, 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1
  • 10
    • 84859885816 scopus 로고    scopus 로고
    • Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
    • Trapnell, C. (2012) Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc, 7, 562-78.
    • (2012) Nat Protoc , vol.7 , pp. 562-578
    • Trapnell, C.1
  • 11
    • 84872198346 scopus 로고    scopus 로고
    • Differential analysis of gene regulation at transcript resolution with rna-seq
    • Trapnell, C. et al. (2013) Differential analysis of gene regulation at transcript resolution with rna-seq. Nat. Biotechnol., 28, 46-53.
    • (2013) Nat. Biotechnol , vol.28 , pp. 46-53
    • Trapnell, C.1
  • 12
    • 84899479065 scopus 로고    scopus 로고
    • STAR: An integrated solution to management and visualization of sequencing data
    • Wang, T. et al. (2013) STAR: an integrated solution to management and visualization of sequencing data. Bioinformatics, 29, 3204-3210.
    • (2013) Bioinformatics , vol.29 , pp. 3204-3210
    • Wang, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.